EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPTRG00000013958 (Gene tree)
Gene ID: 474031
Gene Symbol: RRP1B
Alias: -
Full Name: ribosomal RNA processing 1B
Gene Type: protein_coding
Species: Pan_troglodytes
Status: putative
Strand: Plus strand
Length: 36531 bases
Position: chr21:30156932-30193462
Accession: 1127
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTRP00000024025	Nop52	PF05997.12	1.8e-72	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTRT00000026042	-	5113	XM_001144331	ENSPTRP00000024025	758 (aa)	XP_001144331	H2QL39

Gene Model

Click here to download ENSPTRG00000013958's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000013958's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPTRG00000013958	RRP1B	55	50.000	ENSPTRG00000013962	RRP1	80	53.158

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTRG00000013958	RRP1B	55	50.000	ENSG00000160214	RRP1	78	65.714	Homo_sapiens
ENSPTRG00000013958	RRP1B	100	99.340	ENSG00000160208	RRP1B	100	99.340	Homo_sapiens
ENSPTRG00000013958	RRP1B	64	47.656	ENSAPOG00000007490	-	53	46.594	Acanthochromis_polyacanthus
ENSPTRG00000013958	RRP1B	71	80.535	ENSAMEG00000011401	RRP1B	99	62.696	Ailuropoda_melanoleuca
ENSPTRG00000013958	RRP1B	50	50.781	ENSAMEG00000011448	RRP1	82	50.781	Ailuropoda_melanoleuca
ENSPTRG00000013958	RRP1B	58	48.649	ENSAOCG00000017894	-	100	55.556	Amphiprion_ocellaris
ENSPTRG00000013958	RRP1B	64	46.322	ENSAPEG00000024150	-	53	46.467	Amphiprion_percula
ENSPTRG00000013958	RRP1B	67	44.675	ENSATEG00000005045	-	67	46.457	Anabas_testudineus
ENSPTRG00000013958	RRP1B	99	44.823	ENSACAG00000017851	RRP1B	95	45.703	Anolis_carolinensis
ENSPTRG00000013958	RRP1B	100	89.460	ENSANAG00000034889	RRP1B	100	89.592	Aotus_nancymaae
ENSPTRG00000013958	RRP1B	100	67.414	ENSBTAG00000017418	RRP1B	100	67.414	Bos_taurus
ENSPTRG00000013958	RRP1B	100	88.522	ENSCJAG00000017077	RRP1B	100	88.522	Callithrix_jacchus
ENSPTRG00000013958	RRP1B	94	68.384	ENSCAFG00000010621	RRP1B	99	69.220	Canis_familiaris
ENSPTRG00000013958	RRP1B	100	69.291	ENSCAFG00020018901	RRP1B	100	70.079	Canis_lupus_dingo
ENSPTRG00000013958	RRP1B	100	68.997	ENSCHIG00000021519	RRP1B	100	68.997	Capra_hircus
ENSPTRG00000013958	RRP1B	52	48.259	ENSTSYG00000012831	RRP1	84	48.980	Carlito_syrichta
ENSPTRG00000013958	RRP1B	100	61.629	ENSCPOG00000002396	RRP1B	100	61.629	Cavia_porcellus
ENSPTRG00000013958	RRP1B	56	48.081	ENSCCAG00000029828	RRP1	80	51.031	Cebus_capucinus
ENSPTRG00000013958	RRP1B	100	89.842	ENSCCAG00000029384	RRP1B	100	89.842	Cebus_capucinus
ENSPTRG00000013958	RRP1B	100	95.119	ENSCATG00000017423	RRP1B	100	95.119	Cercocebus_atys
ENSPTRG00000013958	RRP1B	55	45.035	ENSCLAG00000011639	RRP1	83	46.819	Chinchilla_lanigera
ENSPTRG00000013958	RRP1B	100	64.025	ENSCLAG00000005622	RRP1B	100	64.151	Chinchilla_lanigera
ENSPTRG00000013958	RRP1B	100	95.119	ENSCSAG00000007961	RRP1B	100	95.119	Chlorocebus_sabaeus
ENSPTRG00000013958	RRP1B	80	48.697	ENSCHOG00000002426	-	87	49.349	Choloepus_hoffmanni
ENSPTRG00000013958	RRP1B	99	52.375	ENSCPBG00000010310	RRP1B	98	51.973	Chrysemys_picta_bellii
ENSPTRG00000013958	RRP1B	100	94.459	ENSCANG00000040952	RRP1B	100	94.459	Colobus_angolensis_palliatus
ENSPTRG00000013958	RRP1B	100	65.789	ENSCGRG00001010889	-	100	65.789	Cricetulus_griseus_chok1gshd
ENSPTRG00000013958	RRP1B	100	65.395	ENSCGRG00001023882	-	100	65.395	Cricetulus_griseus_chok1gshd
ENSPTRG00000013958	RRP1B	94	64.993	ENSCGRG00000001553	Rrp1b	97	64.903	Cricetulus_griseus_crigri
ENSPTRG00000013958	RRP1B	59	56.044	ENSCSEG00000020711	-	78	56.044	Cynoglossus_semilaevis
ENSPTRG00000013958	RRP1B	100	67.323	ENSDNOG00000032774	RRP1B	100	67.759	Dasypus_novemcinctus
ENSPTRG00000013958	RRP1B	58	48.884	ENSDNOG00000019880	RRP1	82	52.267	Dasypus_novemcinctus
ENSPTRG00000013958	RRP1B	93	61.453	ENSDORG00000005496	Rrp1b	100	62.151	Dipodomys_ordii
ENSPTRG00000013958	RRP1B	100	62.055	ENSETEG00000019489	RRP1B	100	62.055	Echinops_telfairi
ENSPTRG00000013958	RRP1B	100	73.947	ENSEASG00005001687	RRP1B	100	73.947	Equus_asinus_asinus
ENSPTRG00000013958	RRP1B	100	73.947	ENSECAG00000018018	RRP1B	100	73.947	Equus_caballus
ENSPTRG00000013958	RRP1B	63	52.344	ENSELUG00000015885	-	89	48.485	Esox_lucius
ENSPTRG00000013958	RRP1B	100	69.868	ENSFCAG00000010272	RRP1B	100	70.092	Felis_catus
ENSPTRG00000013958	RRP1B	96	62.517	ENSFDAG00000010899	RRP1B	96	62.654	Fukomys_damarensis
ENSPTRG00000013958	RRP1B	57	46.453	ENSFDAG00000013728	RRP1	86	47.030	Fukomys_damarensis
ENSPTRG00000013958	RRP1B	65	44.144	ENSFHEG00000016314	-	60	44.144	Fundulus_heteroclitus
ENSPTRG00000013958	RRP1B	62	49.091	ENSGMOG00000001953	-	67	49.091	Gadus_morhua
ENSPTRG00000013958	RRP1B	50	59.530	ENSGALG00000035696	RRP1B	100	46.556	Gallus_gallus
ENSPTRG00000013958	RRP1B	99	34.641	ENSGACG00000001438	rrp1	79	42.424	Gasterosteus_aculeatus
ENSPTRG00000013958	RRP1B	100	50.765	ENSGAGG00000000375	RRP1B	100	51.786	Gopherus_agassizii
ENSPTRG00000013958	RRP1B	100	98.945	ENSGGOG00000012069	RRP1B	100	98.945	Gorilla_gorilla
ENSPTRG00000013958	RRP1B	55	49.403	ENSGGOG00000000173	RRP1	80	52.507	Gorilla_gorilla
ENSPTRG00000013958	RRP1B	99	64.267	ENSHGLG00000004968	RRP1B	100	64.783	Heterocephalus_glaber_female
ENSPTRG00000013958	RRP1B	91	68.116	ENSHGLG00100002232	RRP1B	99	58.021	Heterocephalus_glaber_male
ENSPTRG00000013958	RRP1B	64	47.656	ENSHCOG00000018388	-	60	47.656	Hippocampus_comes
ENSPTRG00000013958	RRP1B	60	46.610	ENSIPUG00000000673	-	73	44.591	Ictalurus_punctatus
ENSPTRG00000013958	RRP1B	99	71.011	ENSSTOG00000011790	RRP1B	96	71.711	Ictidomys_tridecemlineatus
ENSPTRG00000013958	RRP1B	57	47.786	ENSSTOG00000011116	RRP1	86	51.157	Ictidomys_tridecemlineatus
ENSPTRG00000013958	RRP1B	100	60.468	ENSJJAG00000021279	Rrp1b	100	60.858	Jaculus_jaculus
ENSPTRG00000013958	RRP1B	64	46.761	ENSKMAG00000005539	rrp1	75	46.358	Kryptolebias_marmoratus
ENSPTRG00000013958	RRP1B	50	54.242	ENSLACG00000017332	-	99	42.506	Latimeria_chalumnae
ENSPTRG00000013958	RRP1B	88	66.176	ENSLAFG00000000766	RRP1B	99	65.926	Loxodonta_africana
ENSPTRG00000013958	RRP1B	100	95.119	ENSMFAG00000039152	RRP1B	100	95.119	Macaca_fascicularis
ENSPTRG00000013958	RRP1B	100	91.953	ENSMMUG00000000104	RRP1B	100	91.953	Macaca_mulatta
ENSPTRG00000013958	RRP1B	100	94.987	ENSMNEG00000034269	RRP1B	100	94.987	Macaca_nemestrina
ENSPTRG00000013958	RRP1B	100	91.196	ENSMLEG00000040044	RRP1B	99	95.245	Mandrillus_leucophaeus
ENSPTRG00000013958	RRP1B	50	60.417	ENSMGAG00000014591	RRP1B	100	47.898	Meleagris_gallopavo
ENSPTRG00000013958	RRP1B	100	63.158	ENSMAUG00000021508	Rrp1b	100	63.158	Mesocricetus_auratus
ENSPTRG00000013958	RRP1B	100	78.158	ENSMICG00000004686	RRP1B	100	78.289	Microcebus_murinus
ENSPTRG00000013958	RRP1B	58	48.438	ENSMICG00000004700	RRP1	96	48.214	Microcebus_murinus
ENSPTRG00000013958	RRP1B	100	62.549	ENSMOCG00000001117	Rrp1b	100	62.681	Microtus_ochrogaster
ENSPTRG00000013958	RRP1B	100	65.445	ENSMODG00000021033	RRP1B	100	65.445	Monodelphis_domestica
ENSPTRG00000013958	RRP1B	100	61.579	MGP_CAROLIEiJ_G0021376	Rrp1b	100	61.498	Mus_caroli
ENSPTRG00000013958	RRP1B	58	39.759	ENSMUSG00000061032	Rrp1	78	44.845	Mus_musculus
ENSPTRG00000013958	RRP1B	100	60.813	ENSMUSG00000058392	Rrp1b	100	61.257	Mus_musculus
ENSPTRG00000013958	RRP1B	100	63.601	MGP_PahariEiJ_G0023695	Rrp1b	100	63.601	Mus_pahari
ENSPTRG00000013958	RRP1B	100	61.518	MGP_SPRETEiJ_G0022290	Rrp1b	100	61.518	Mus_spretus
ENSPTRG00000013958	RRP1B	84	62.911	ENSMPUG00000009810	RRP1B	99	63.067	Mustela_putorius_furo
ENSPTRG00000013958	RRP1B	99	71.671	ENSMLUG00000007738	RRP1B	99	71.540	Myotis_lucifugus
ENSPTRG00000013958	RRP1B	100	66.579	ENSNGAG00000021073	Rrp1b	100	66.579	Nannospalax_galili
ENSPTRG00000013958	RRP1B	100	92.348	ENSNLEG00000001490	RRP1B	100	92.348	Nomascus_leucogenys
ENSPTRG00000013958	RRP1B	55	49.165	ENSNLEG00000034734	RRP1	80	51.979	Nomascus_leucogenys
ENSPTRG00000013958	RRP1B	75	86.555	ENSMEUG00000003226	-	89	86.555	Notamacropus_eugenii
ENSPTRG00000013958	RRP1B	100	61.133	ENSODEG00000013177	RRP1B	100	61.133	Octodon_degus
ENSPTRG00000013958	RRP1B	61	51.282	ENSONIG00000004264	rrp1	98	36.253	Oreochromis_niloticus
ENSPTRG00000013958	RRP1B	99	51.369	ENSOANG00000006470	RRP1B	99	52.666	Ornithorhynchus_anatinus
ENSPTRG00000013958	RRP1B	94	56.054	ENSOCUG00000025931	RRP1B	100	56.432	Oryctolagus_cuniculus
ENSPTRG00000013958	RRP1B	65	49.206	ENSORLG00020007199	-	56	52.688	Oryzias_latipes_hni
ENSPTRG00000013958	RRP1B	68	46.257	ENSORLG00015004425	-	56	48.800	Oryzias_latipes_hsok
ENSPTRG00000013958	RRP1B	64	51.587	ENSOMEG00000016910	-	65	46.113	Oryzias_melastigma
ENSPTRG00000013958	RRP1B	98	62.213	ENSOGAG00000009872	RRP1B	91	76.692	Otolemur_garnettii
ENSPTRG00000013958	RRP1B	94	66.434	ENSOARG00000011314	RRP1B	100	66.434	Ovis_aries
ENSPTRG00000013958	RRP1B	94	99.580	ENSPPAG00000035319	RRP1B	99	99.441	Pan_paniscus
ENSPTRG00000013958	RRP1B	100	68.684	ENSPPRG00000010356	RRP1B	100	68.906	Panthera_pardus
ENSPTRG00000013958	RRP1B	50	50.928	ENSPPRG00000010656	RRP1	80	51.491	Panthera_pardus
ENSPTRG00000013958	RRP1B	81	73.333	ENSPTIG00000016894	RRP1B	97	74.321	Panthera_tigris_altaica
ENSPTRG00000013958	RRP1B	56	47.664	ENSPANG00000015097	RRP1	80	51.715	Papio_anubis
ENSPTRG00000013958	RRP1B	100	95.383	ENSPANG00000011090	RRP1B	100	95.383	Papio_anubis
ENSPTRG00000013958	RRP1B	99	52.332	ENSPSIG00000008152	RRP1B	96	52.625	Pelodiscus_sinensis
ENSPTRG00000013958	RRP1B	100	64.954	ENSPEMG00000022490	Rrp1b	100	64.954	Peromyscus_maniculatus_bairdii
ENSPTRG00000013958	RRP1B	100	66.361	ENSPCIG00000015513	RRP1B	100	66.361	Phascolarctos_cinereus
ENSPTRG00000013958	RRP1B	100	37.719	ENSPFOG00000007424	-	99	37.391	Poecilia_formosa
ENSPTRG00000013958	RRP1B	66	46.049	ENSPMEG00000007042	-	60	46.049	Poecilia_mexicana
ENSPTRG00000013958	RRP1B	64	47.287	ENSPREG00000015673	-	59	47.368	Poecilia_reticulata
ENSPTRG00000013958	RRP1B	55	48.815	ENSPPYG00000011474	RRP1	80	51.832	Pongo_abelii
ENSPTRG00000013958	RRP1B	100	97.889	ENSPPYG00000011470	RRP1B	100	97.889	Pongo_abelii
ENSPTRG00000013958	RRP1B	85	83.158	ENSPCAG00000013723	RRP1B	91	83.158	Procavia_capensis
ENSPTRG00000013958	RRP1B	100	78.816	ENSPCOG00000017927	RRP1B	100	78.947	Propithecus_coquereli
ENSPTRG00000013958	RRP1B	99	66.491	ENSPVAG00000001436	RRP1B	99	66.754	Pteropus_vampyrus
ENSPTRG00000013958	RRP1B	55	57.500	ENSPNAG00000007718	-	52	44.413	Pygocentrus_nattereri
ENSPTRG00000013958	RRP1B	100	64.032	ENSRNOG00000001194	Rrp1b	100	64.032	Rattus_norvegicus
ENSPTRG00000013958	RRP1B	100	90.765	ENSRBIG00000041689	RRP1B	100	90.765	Rhinopithecus_bieti
ENSPTRG00000013958	RRP1B	55	49.043	ENSRBIG00000032082	RRP1	80	52.116	Rhinopithecus_bieti
ENSPTRG00000013958	RRP1B	100	95.251	ENSRROG00000031499	RRP1B	100	95.402	Rhinopithecus_roxellana
ENSPTRG00000013958	RRP1B	94	86.119	ENSSBOG00000034727	RRP1B	99	86.119	Saimiri_boliviensis_boliviensis
ENSPTRG00000013958	RRP1B	100	66.144	ENSSHAG00000017789	RRP1B	100	66.144	Sarcophilus_harrisii
ENSPTRG00000013958	RRP1B	58	50.000	ENSSFOG00015003932	-	57	50.000	Scleropages_formosus
ENSPTRG00000013958	RRP1B	64	48.837	ENSSMAG00000016847	-	88	46.092	Scophthalmus_maximus
ENSPTRG00000013958	RRP1B	65	49.618	ENSSDUG00000000551	-	55	48.951	Seriola_dumerili
ENSPTRG00000013958	RRP1B	65	49.618	ENSSLDG00000002538	-	55	48.951	Seriola_lalandi_dorsalis
ENSPTRG00000013958	RRP1B	77	66.667	ENSSARG00000003108	-	79	66.667	Sorex_araneus
ENSPTRG00000013958	RRP1B	100	46.269	ENSSPUG00000002834	RRP1B	100	46.625	Sphenodon_punctatus
ENSPTRG00000013958	RRP1B	64	48.837	ENSSPAG00000005370	-	52	48.837	Stegastes_partitus
ENSPTRG00000013958	RRP1B	100	63.588	ENSSSCG00000021698	RRP1B	100	63.588	Sus_scrofa
ENSPTRG00000013958	RRP1B	59	51.685	ENSTNIG00000005053	rrp1	70	51.685	Tetraodon_nigroviridis
ENSPTRG00000013958	RRP1B	77	84.320	ENSTBEG00000000422	RRP1B	100	84.320	Tupaia_belangeri
ENSPTRG00000013958	RRP1B	100	66.491	ENSTTRG00000000723	RRP1B	100	66.930	Tursiops_truncatus
ENSPTRG00000013958	RRP1B	100	67.890	ENSUAMG00000026765	RRP1B	100	67.890	Ursus_americanus
ENSPTRG00000013958	RRP1B	63	82.840	ENSUMAG00000025510	RRP1B	89	82.840	Ursus_maritimus
ENSPTRG00000013958	RRP1B	94	68.802	ENSVVUG00000024509	RRP1B	99	69.638	Vulpes_vulpes
ENSPTRG00000013958	RRP1B	60	46.903	ENSXETG00000013683	rrp1b	66	47.181	Xenopus_tropicalis
ENSPTRG00000013958	RRP1B	81	46.667	ENSXMAG00000023123	-	72	46.667	Xiphophorus_maculatus