EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPTRG00000013962 (Gene tree)
Gene ID: 474032
Gene Symbol: RRP1
Alias: -
Full Name: ribosomal RNA processing 1
Gene Type: protein_coding
Species: Pan_troglodytes
Status: putative
Strand: Plus strand
Length: 14623 bases
Position: chr21:30295238-30309860
Accession: 1128
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTRP00000053932	Nop52	PF05997.12	4.4e-70	1	1
ENSPTRP00000075355	Nop52	PF05997.12	4.6e-70	1	1
ENSPTRP00000073508	Nop52	PF05997.12	8.3e-65	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTRT00000107882	-	1299	-	ENSPTRP00000073508	432 (aa)	-	A0A2I3S947
ENSPTRT00000026051	-	1344	-	ENSPTRP00000053932	447 (aa)	-	H2RAH7
ENSPTRT00000096686	-	1803	XM_001145779	ENSPTRP00000075355	461 (aa)	XP_001145779	K7CF65

Gene Model

Click here to download ENSPTRG00000013962's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000013962's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPTRG00000013962	RRP1	80	53.158	ENSPTRG00000013958	RRP1B	55	50.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTRG00000013962	RRP1	100	99.566	ENSG00000160214	RRP1	100	99.566	Homo_sapiens
ENSPTRG00000013962	RRP1	80	53.158	ENSG00000160208	RRP1B	55	50.000	Homo_sapiens
ENSPTRG00000013962	RRP1	99	68.182	ENSAMEG00000011448	RRP1	89	73.775	Ailuropoda_melanoleuca
ENSPTRG00000013962	RRP1	62	49.104	ENSACIG00000019121	rrp1	57	49.823	Amphilophus_citrinellus
ENSPTRG00000013962	RRP1	84	46.803	ENSAOCG00000017894	-	75	50.716	Amphiprion_ocellaris
ENSPTRG00000013962	RRP1	100	85.466	ENSANAG00000037815	RRP1	100	85.466	Aotus_nancymaae
ENSPTRG00000013962	RRP1	99	65.227	ENSBTAG00000003981	RRP1	99	63.812	Bos_taurus
ENSPTRG00000013962	RRP1	94	91.034	ENSCJAG00000043205	RRP1	87	90.802	Callithrix_jacchus
ENSPTRG00000013962	RRP1	72	53.687	ENSCAFG00000010621	RRP1B	53	50.398	Canis_familiaris
ENSPTRG00000013962	RRP1	99	67.949	ENSCAFG00000010646	RRP1	92	71.259	Canis_familiaris
ENSPTRG00000013962	RRP1	80	53.968	ENSCAFG00020018901	RRP1B	58	50.943	Canis_lupus_dingo
ENSPTRG00000013962	RRP1	99	67.949	ENSCAFG00020018979	RRP1	92	71.259	Canis_lupus_dingo
ENSPTRG00000013962	RRP1	99	65.443	ENSCHIG00000020948	RRP1	99	64.957	Capra_hircus
ENSPTRG00000013962	RRP1	99	73.134	ENSTSYG00000012831	RRP1	99	72.068	Carlito_syrichta
ENSPTRG00000013962	RRP1	66	70.606	ENSCAPG00000008576	RRP1	83	70.695	Cavia_aperea
ENSPTRG00000013962	RRP1	99	66.377	ENSCPOG00000038986	RRP1	98	65.652	Cavia_porcellus
ENSPTRG00000013962	RRP1	80	52.770	ENSCCAG00000029384	RRP1B	50	56.418	Cebus_capucinus
ENSPTRG00000013962	RRP1	100	90.929	ENSCCAG00000029828	RRP1	100	90.929	Cebus_capucinus
ENSPTRG00000013962	RRP1	100	94.577	ENSCATG00000015632	RRP1	100	94.577	Cercocebus_atys
ENSPTRG00000013962	RRP1	99	68.590	ENSCLAG00000011639	RRP1	98	68.376	Chinchilla_lanigera
ENSPTRG00000013962	RRP1	73	95.077	ENSCSAG00000007936	RRP1	100	95.758	Chlorocebus_sabaeus
ENSPTRG00000013962	RRP1	71	45.897	ENSCHOG00000002426	-	54	45.897	Choloepus_hoffmanni
ENSPTRG00000013962	RRP1	73	32.945	ENSCING00000003304	-	73	32.070	Ciona_intestinalis
ENSPTRG00000013962	RRP1	80	52.073	ENSCANG00000040952	RRP1B	54	49.761	Colobus_angolensis_palliatus
ENSPTRG00000013962	RRP1	91	81.235	ENSCANG00000042611	RRP1	85	80.988	Colobus_angolensis_palliatus
ENSPTRG00000013962	RRP1	99	67.957	ENSCGRG00001011920	Rrp1	92	74.010	Cricetulus_griseus_chok1gshd
ENSPTRG00000013962	RRP1	71	55.455	ENSCGRG00001023882	-	55	69.841	Cricetulus_griseus_chok1gshd
ENSPTRG00000013962	RRP1	99	67.957	ENSCGRG00000008915	Rrp1	92	74.010	Cricetulus_griseus_crigri
ENSPTRG00000013962	RRP1	75	51.714	ENSCSEG00000020711	-	64	51.734	Cynoglossus_semilaevis
ENSPTRG00000013962	RRP1	75	46.286	ENSCVAG00000017568	-	88	45.739	Cyprinodon_variegatus
ENSPTRG00000013962	RRP1	99	70.664	ENSDNOG00000019880	RRP1	99	70.664	Dasypus_novemcinctus
ENSPTRG00000013962	RRP1	90	63.679	ENSDORG00000002104	Rrp1	99	64.019	Dipodomys_ordii
ENSPTRG00000013962	RRP1	73	64.220	ENSETEG00000002963	-	99	52.155	Echinops_telfairi
ENSPTRG00000013962	RRP1	80	51.200	ENSEASG00005001687	RRP1B	56	48.931	Equus_asinus_asinus
ENSPTRG00000013962	RRP1	99	70.690	ENSEASG00005001673	RRP1	100	70.282	Equus_asinus_asinus
ENSPTRG00000013962	RRP1	99	71.121	ENSECAG00000015703	RRP1	100	70.716	Equus_caballus
ENSPTRG00000013962	RRP1	80	50.933	ENSECAG00000018018	RRP1B	56	48.694	Equus_caballus
ENSPTRG00000013962	RRP1	73	48.889	ENSELUG00000015885	-	87	49.689	Esox_lucius
ENSPTRG00000013962	RRP1	89	73.735	ENSFCAG00000008434	RRP1	91	73.735	Felis_catus
ENSPTRG00000013962	RRP1	99	65.152	ENSFDAG00000013728	RRP1	99	66.022	Fukomys_damarensis
ENSPTRG00000013962	RRP1	85	44.279	ENSGACG00000001438	rrp1	52	49.112	Gasterosteus_aculeatus
ENSPTRG00000013962	RRP1	100	98.482	ENSGGOG00000000173	RRP1	100	98.482	Gorilla_gorilla
ENSPTRG00000013962	RRP1	80	53.158	ENSGGOG00000012069	RRP1B	55	50.000	Gorilla_gorilla
ENSPTRG00000013962	RRP1	89	69.565	ENSHGLG00000017085	RRP1	95	65.293	Heterocephalus_glaber_female
ENSPTRG00000013962	RRP1	82	48.974	ENSHGLG00000004968	RRP1B	61	46.207	Heterocephalus_glaber_female
ENSPTRG00000013962	RRP1	73	46.000	ENSIPUG00000000673	-	67	45.714	Ictalurus_punctatus
ENSPTRG00000013962	RRP1	93	72.603	ENSSTOG00000011116	RRP1	96	73.882	Ictidomys_tridecemlineatus
ENSPTRG00000013962	RRP1	99	70.108	ENSJJAG00000018886	Rrp1	99	69.677	Jaculus_jaculus
ENSPTRG00000013962	RRP1	72	48.406	ENSKMAG00000005539	rrp1	51	48.986	Kryptolebias_marmoratus
ENSPTRG00000013962	RRP1	74	47.486	ENSLBEG00000021417	RRP1	89	47.339	Labrus_bergylta
ENSPTRG00000013962	RRP1	84	52.826	ENSLAFG00000000766	RRP1B	80	57.726	Loxodonta_africana
ENSPTRG00000013962	RRP1	99	65.310	ENSLAFG00000022901	RRP1	91	69.287	Loxodonta_africana
ENSPTRG00000013962	RRP1	100	93.275	ENSMFAG00000003202	RRP1	100	93.275	Macaca_fascicularis
ENSPTRG00000013962	RRP1	100	92.842	ENSMMUG00000012304	RRP1	100	92.842	Macaca_mulatta
ENSPTRG00000013962	RRP1	100	93.059	ENSMNEG00000031210	RRP1	100	93.059	Macaca_nemestrina
ENSPTRG00000013962	RRP1	92	94.550	ENSMLEG00000037797	RRP1	99	94.550	Mandrillus_leucophaeus
ENSPTRG00000013962	RRP1	86	63.119	ENSMAUG00000017653	Rrp1	98	56.838	Mesocricetus_auratus
ENSPTRG00000013962	RRP1	80	52.507	ENSMICG00000004686	RRP1B	56	50.119	Microcebus_murinus
ENSPTRG00000013962	RRP1	99	76.242	ENSMICG00000004700	RRP1	99	74.732	Microcebus_murinus
ENSPTRG00000013962	RRP1	99	56.098	ENSMOCG00000015687	Rrp1	99	57.114	Microtus_ochrogaster
ENSPTRG00000013962	RRP1	74	46.064	ENSMMOG00000019175	rrp1	86	46.064	Mola_mola
ENSPTRG00000013962	RRP1	75	64.740	ENSMODG00000021036	-	52	62.674	Monodelphis_domestica
ENSPTRG00000013962	RRP1	74	50.000	ENSMALG00000010310	rrp1	88	50.000	Monopterus_albus
ENSPTRG00000013962	RRP1	71	51.360	MGP_CAROLIEiJ_G0021376	Rrp1b	53	66.667	Mus_caroli
ENSPTRG00000013962	RRP1	99	59.615	MGP_CAROLIEiJ_G0015508	Rrp1	96	63.559	Mus_caroli
ENSPTRG00000013962	RRP1	99	59.309	ENSMUSG00000061032	Rrp1	96	62.500	Mus_musculus
ENSPTRG00000013962	RRP1	71	52.870	ENSMUSG00000058392	Rrp1b	53	68.254	Mus_musculus
ENSPTRG00000013962	RRP1	71	53.172	MGP_PahariEiJ_G0023695	Rrp1b	53	66.667	Mus_pahari
ENSPTRG00000013962	RRP1	99	58.397	MGP_PahariEiJ_G0030921	Rrp1	99	59.693	Mus_pahari
ENSPTRG00000013962	RRP1	99	82.400	MGP_SPRETEiJ_G0016321	Rrp1	98	61.284	Mus_spretus
ENSPTRG00000013962	RRP1	71	53.474	MGP_SPRETEiJ_G0022290	Rrp1b	53	68.254	Mus_spretus
ENSPTRG00000013962	RRP1	88	65.591	ENSMPUG00000009826	RRP1	96	65.245	Mustela_putorius_furo
ENSPTRG00000013962	RRP1	90	92.576	ENSMLUG00000017788	RRP1	99	64.410	Myotis_lucifugus
ENSPTRG00000013962	RRP1	85	58.161	ENSNGAG00000022344	Rrp1	93	58.219	Nannospalax_galili
ENSPTRG00000013962	RRP1	100	96.095	ENSNLEG00000034734	RRP1	100	96.095	Nomascus_leucogenys
ENSPTRG00000013962	RRP1	79	67.218	ENSOPRG00000001319	RRP1	97	69.014	Ochotona_princeps
ENSPTRG00000013962	RRP1	72	63.798	ENSOANG00000006472	-	99	56.267	Ornithorhynchus_anatinus
ENSPTRG00000013962	RRP1	73	82.119	ENSOCUG00000022843	-	76	82.119	Oryctolagus_cuniculus
ENSPTRG00000013962	RRP1	99	74.353	ENSOGAG00000006105	RRP1	99	75.000	Otolemur_garnettii
ENSPTRG00000013962	RRP1	72	55.758	ENSOGAG00000009872	RRP1B	62	50.122	Otolemur_garnettii
ENSPTRG00000013962	RRP1	99	62.907	ENSOARG00000011434	RRP1	99	61.588	Ovis_aries
ENSPTRG00000013962	RRP1	100	99.566	ENSPPAG00000029050	RRP1	100	99.566	Pan_paniscus
ENSPTRG00000013962	RRP1	89	73.494	ENSPPRG00000010656	RRP1	90	73.494	Panthera_pardus
ENSPTRG00000013962	RRP1	84	61.250	ENSPTIG00000019473	RRP1	86	62.368	Panthera_tigris_altaica
ENSPTRG00000013962	RRP1	100	93.709	ENSPANG00000015097	RRP1	100	93.709	Papio_anubis
ENSPTRG00000013962	RRP1	77	58.172	ENSPSIG00000008152	RRP1B	52	54.762	Pelodiscus_sinensis
ENSPTRG00000013962	RRP1	74	40.793	ENSPMGG00000007512	-	84	40.223	Periophthalmus_magnuspinnatus
ENSPTRG00000013962	RRP1	85	74.938	ENSPEMG00000018421	Rrp1	91	75.750	Peromyscus_maniculatus_bairdii
ENSPTRG00000013962	RRP1	88	58.195	ENSPCIG00000015523	-	75	64.912	Phascolarctos_cinereus
ENSPTRG00000013962	RRP1	80	54.907	ENSPCIG00000015513	RRP1B	57	52.195	Phascolarctos_cinereus
ENSPTRG00000013962	RRP1	100	96.963	ENSPPYG00000011474	RRP1	100	96.963	Pongo_abelii
ENSPTRG00000013962	RRP1	78	57.778	ENSPCAG00000008370	-	95	58.310	Procavia_capensis
ENSPTRG00000013962	RRP1	80	53.034	ENSPCOG00000017927	RRP1B	57	50.597	Propithecus_coquereli
ENSPTRG00000013962	RRP1	99	71.922	ENSPCOG00000017706	RRP1	99	71.030	Propithecus_coquereli
ENSPTRG00000013962	RRP1	85	62.857	ENSPVAG00000009925	-	61	65.248	Pteropus_vampyrus
ENSPTRG00000013962	RRP1	99	64.655	ENSRNOG00000001203	Rrp1	98	65.598	Rattus_norvegicus
ENSPTRG00000013962	RRP1	100	94.577	ENSRBIG00000032082	RRP1	100	94.577	Rhinopithecus_bieti
ENSPTRG00000013962	RRP1	100	94.794	ENSRROG00000039799	RRP1	100	94.794	Rhinopithecus_roxellana
ENSPTRG00000013962	RRP1	99	84.416	ENSSBOG00000034689	RRP1	100	84.416	Saimiri_boliviensis_boliviensis
ENSPTRG00000013962	RRP1	69	60.748	ENSSHAG00000010304	-	92	63.487	Sarcophilus_harrisii
ENSPTRG00000013962	RRP1	67	45.921	ENSSFOG00015003932	-	51	45.921	Scleropages_formosus
ENSPTRG00000013962	RRP1	73	49.714	ENSSMAG00000016847	-	82	48.802	Scophthalmus_maximus
ENSPTRG00000013962	RRP1	80	53.704	ENSSSCG00000021698	RRP1B	52	56.069	Sus_scrofa
ENSPTRG00000013962	RRP1	99	66.667	ENSSSCG00000037061	RRP1	99	68.026	Sus_scrofa
ENSPTRG00000013962	RRP1	74	51.009	ENSTRUG00000017592	rrp1	97	51.009	Takifugu_rubripes
ENSPTRG00000013962	RRP1	87	45.047	ENSTNIG00000005053	rrp1	54	50.291	Tetraodon_nigroviridis
ENSPTRG00000013962	RRP1	73	76.129	ENSTBEG00000001260	-	62	76.812	Tupaia_belangeri
ENSPTRG00000013962	RRP1	77	50.820	ENSTBEG00000000422	RRP1B	62	50.820	Tupaia_belangeri
ENSPTRG00000013962	RRP1	72	76.471	ENSTTRG00000011162	RRP1	84	76.471	Tursiops_truncatus
ENSPTRG00000013962	RRP1	81	51.706	ENSTTRG00000000723	RRP1B	57	49.279	Tursiops_truncatus
ENSPTRG00000013962	RRP1	73	61.111	ENSUAMG00000014189	-	97	58.286	Ursus_americanus
ENSPTRG00000013962	RRP1	72	51.032	ENSUMAG00000025510	RRP1B	57	55.068	Ursus_maritimus
ENSPTRG00000013962	RRP1	90	66.033	ENSUMAG00000025507	RRP1	98	62.745	Ursus_maritimus
ENSPTRG00000013962	RRP1	69	57.317	ENSVVUG00000024498	-	66	59.925	Vulpes_vulpes
ENSPTRG00000013962	RRP1	72	53.529	ENSVVUG00000024509	RRP1B	53	50.265	Vulpes_vulpes
ENSPTRG00000013962	RRP1	51	49.550	ENSXCOG00000008312	-	66	55.932	Xiphophorus_couchianus