EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPTRG00000014268 (Gene tree)
Gene ID: 470184
Gene Symbol: PATZ1
Alias: -
Full Name: POZ/BTB and AT hook containing zinc finger 1
Gene Type: protein_coding
Species: Pan_troglodytes
Status: putative
Strand: Minus strand
Length: 20791 bases
Position: chr22:17923052-17943842
Accession: 12910
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTRP00000024578	zf-C2H2	PF00096.26	3.7e-26	1	5
ENSPTRP00000024578	zf-C2H2	PF00096.26	3.7e-26	2	5
ENSPTRP00000024578	zf-C2H2	PF00096.26	3.7e-26	3	5
ENSPTRP00000024578	zf-C2H2	PF00096.26	3.7e-26	4	5
ENSPTRP00000024578	zf-C2H2	PF00096.26	3.7e-26	5	5
ENSPTRP00000074822	zf-C2H2	PF00096.26	7.5e-20	1	4
ENSPTRP00000074822	zf-C2H2	PF00096.26	7.5e-20	2	4
ENSPTRP00000074822	zf-C2H2	PF00096.26	7.5e-20	3	4
ENSPTRP00000074822	zf-C2H2	PF00096.26	7.5e-20	4	4
ENSPTRP00000066291	zf-C2H2	PF00096.26	8.7e-20	1	4
ENSPTRP00000066291	zf-C2H2	PF00096.26	8.7e-20	2	4
ENSPTRP00000066291	zf-C2H2	PF00096.26	8.7e-20	3	4
ENSPTRP00000066291	zf-C2H2	PF00096.26	8.7e-20	4	4
ENSPTRP00000069773	zf-C2H2	PF00096.26	2.2e-15	1	3
ENSPTRP00000069773	zf-C2H2	PF00096.26	2.2e-15	2	3
ENSPTRP00000069773	zf-C2H2	PF00096.26	2.2e-15	3	3
ENSPTRP00000081155	zf-C2H2	PF00096.26	1.6e-12	1	3
ENSPTRP00000081155	zf-C2H2	PF00096.26	1.6e-12	2	3
ENSPTRP00000081155	zf-C2H2	PF00096.26	1.6e-12	3	3
ENSPTRP00000024578	zf-met	PF12874.7	3.6e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTRT00000078063	-	1956	-	ENSPTRP00000066291	651 (aa)	-	A0A2I3RNK9
ENSPTRT00000111251	-	3286	XM_003317208	ENSPTRP00000069773	537 (aa)	XP_003317256	K7B838
ENSPTRT00000078392	-	3957	XM_003317207	ENSPTRP00000074822	641 (aa)	XP_003317255	K7CNL0
ENSPTRT00000100409	-	294	-	ENSPTRP00000092805	97 (aa)	-	A0A2I3TU60
ENSPTRT00000026663	-	4095	XM_003317209	ENSPTRP00000024578	687 (aa)	XP_003317257	H2QLI5
ENSPTRT00000094407	-	1737	-	ENSPTRP00000081155	578 (aa)	-	A0A2I3SX48

Gene Model

Click here to download ENSPTRG00000014268's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000014268's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPTRG00000014268	PATZ1	75	30.120	ENSPTRG00000016842	ZNF131	68	30.120

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTRG00000014268	PATZ1	100	99.854	ENSG00000100105	PATZ1	100	99.854	Homo_sapiens
ENSPTRG00000014268	PATZ1	99	60.038	ENSAPOG00000018447	patz1	100	59.240	Acanthochromis_polyacanthus
ENSPTRG00000014268	PATZ1	100	99.272	ENSAMEG00000007074	PATZ1	100	99.272	Ailuropoda_melanoleuca
ENSPTRG00000014268	PATZ1	100	60.232	ENSACIG00000016779	patz1	100	59.961	Amphilophus_citrinellus
ENSPTRG00000014268	PATZ1	100	57.563	ENSAPEG00000013354	patz1	100	57.703	Amphiprion_percula
ENSPTRG00000014268	PATZ1	100	62.549	ENSATEG00000011260	patz1	100	62.353	Anabas_testudineus
ENSPTRG00000014268	PATZ1	85	91.438	ENSAPLG00000003934	PATZ1	99	91.267	Anas_platyrhynchos
ENSPTRG00000014268	PATZ1	100	99.854	ENSANAG00000029603	PATZ1	100	99.854	Aotus_nancymaae
ENSPTRG00000014268	PATZ1	97	62.524	ENSAMXG00000002273	patz1	98	62.147	Astyanax_mexicanus
ENSPTRG00000014268	PATZ1	100	99.376	ENSBTAG00000005478	PATZ1	100	99.376	Bos_taurus
ENSPTRG00000014268	PATZ1	100	99.854	ENSCJAG00000010978	PATZ1	100	99.854	Callithrix_jacchus
ENSPTRG00000014268	PATZ1	100	99.532	ENSCAFG00000013087	PATZ1	100	99.418	Canis_familiaris
ENSPTRG00000014268	PATZ1	100	98.908	ENSCHIG00000020203	PATZ1	100	98.908	Capra_hircus
ENSPTRG00000014268	PATZ1	100	99.688	ENSTSYG00000033183	PATZ1	100	99.688	Carlito_syrichta
ENSPTRG00000014268	PATZ1	100	99.854	ENSCCAG00000028772	PATZ1	100	99.854	Cebus_capucinus
ENSPTRG00000014268	PATZ1	100	99.854	ENSCATG00000006101	PATZ1	100	99.854	Cercocebus_atys
ENSPTRG00000014268	PATZ1	100	89.130	ENSCPBG00000011277	PATZ1	100	89.275	Chrysemys_picta_bellii
ENSPTRG00000014268	PATZ1	100	99.854	ENSCANG00000024972	PATZ1	100	99.854	Colobus_angolensis_palliatus
ENSPTRG00000014268	PATZ1	100	97.380	ENSCGRG00001004071	Patz1	100	97.380	Cricetulus_griseus_chok1gshd
ENSPTRG00000014268	PATZ1	93	98.134	ENSCGRG00000004814	Patz1	100	98.134	Cricetulus_griseus_crigri
ENSPTRG00000014268	PATZ1	100	55.307	ENSCSEG00000001385	patz1	100	55.139	Cynoglossus_semilaevis
ENSPTRG00000014268	PATZ1	100	58.997	ENSCVAG00000007684	patz1	100	58.936	Cyprinodon_variegatus
ENSPTRG00000014268	PATZ1	97	60.679	ENSDARG00000076584	patz1	98	58.511	Danio_rerio
ENSPTRG00000014268	PATZ1	90	98.708	ENSDNOG00000003183	PATZ1	100	98.708	Dasypus_novemcinctus
ENSPTRG00000014268	PATZ1	100	99.532	ENSDORG00000023834	Patz1	100	99.532	Dipodomys_ordii
ENSPTRG00000014268	PATZ1	100	99.376	ENSECAG00000025030	PATZ1	100	99.376	Equus_caballus
ENSPTRG00000014268	PATZ1	99	61.887	ENSELUG00000002333	patz1	100	58.166	Esox_lucius
ENSPTRG00000014268	PATZ1	100	99.532	ENSFCAG00000030253	PATZ1	100	99.532	Felis_catus
ENSPTRG00000014268	PATZ1	86	91.695	ENSFALG00000007450	PATZ1	99	91.652	Ficedula_albicollis
ENSPTRG00000014268	PATZ1	96	98.246	ENSFDAG00000005614	PATZ1	100	98.246	Fukomys_damarensis
ENSPTRG00000014268	PATZ1	100	57.918	ENSFHEG00000014755	patz1	100	57.625	Fundulus_heteroclitus
ENSPTRG00000014268	PATZ1	98	55.091	ENSGMOG00000001062	patz1	98	54.848	Gadus_morhua
ENSPTRG00000014268	PATZ1	100	88.489	ENSGALG00000006934	PATZ1	100	88.633	Gallus_gallus
ENSPTRG00000014268	PATZ1	100	59.029	ENSGAFG00000010053	patz1	100	57.856	Gambusia_affinis
ENSPTRG00000014268	PATZ1	85	92.110	ENSGAGG00000003214	PATZ1	100	91.938	Gopherus_agassizii
ENSPTRG00000014268	PATZ1	100	100.000	ENSGGOG00000017171	PATZ1	100	100.000	Gorilla_gorilla
ENSPTRG00000014268	PATZ1	98	62.846	ENSHCOG00000017644	patz1	98	61.372	Hippocampus_comes
ENSPTRG00000014268	PATZ1	97	60.285	ENSIPUG00000017653	patz1	97	53.748	Ictalurus_punctatus
ENSPTRG00000014268	PATZ1	100	99.272	ENSSTOG00000020707	PATZ1	100	99.272	Ictidomys_tridecemlineatus
ENSPTRG00000014268	PATZ1	100	96.952	ENSJJAG00000015259	Patz1	100	96.952	Jaculus_jaculus
ENSPTRG00000014268	PATZ1	100	57.670	ENSKMAG00000008157	patz1	100	57.627	Kryptolebias_marmoratus
ENSPTRG00000014268	PATZ1	100	98.690	ENSLAFG00000002317	PATZ1	100	98.690	Loxodonta_africana
ENSPTRG00000014268	PATZ1	100	99.709	ENSMFAG00000040968	PATZ1	100	99.709	Macaca_fascicularis
ENSPTRG00000014268	PATZ1	100	99.709	ENSMNEG00000037588	PATZ1	100	99.709	Macaca_nemestrina
ENSPTRG00000014268	PATZ1	100	99.854	ENSMLEG00000030938	PATZ1	100	99.854	Mandrillus_leucophaeus
ENSPTRG00000014268	PATZ1	100	57.625	ENSMAMG00000023652	patz1	100	57.771	Mastacembelus_armatus
ENSPTRG00000014268	PATZ1	85	87.863	ENSMGAG00000008439	PATZ1	100	87.692	Meleagris_gallopavo
ENSPTRG00000014268	PATZ1	100	99.127	ENSMAUG00000004129	Patz1	100	99.127	Mesocricetus_auratus
ENSPTRG00000014268	PATZ1	100	99.688	ENSMICG00000005430	PATZ1	100	99.688	Microcebus_murinus
ENSPTRG00000014268	PATZ1	100	98.981	ENSMOCG00000014488	Patz1	100	98.981	Microtus_ochrogaster
ENSPTRG00000014268	PATZ1	99	55.469	ENSMMOG00000021679	patz1	100	48.656	Mola_mola
ENSPTRG00000014268	PATZ1	100	56.860	ENSMALG00000021172	patz1	100	56.577	Monopterus_albus
ENSPTRG00000014268	PATZ1	100	98.981	MGP_CAROLIEiJ_G0016007	Patz1	100	98.981	Mus_caroli
ENSPTRG00000014268	PATZ1	100	99.127	ENSMUSG00000020453	Patz1	100	99.127	Mus_musculus
ENSPTRG00000014268	PATZ1	100	99.127	MGP_PahariEiJ_G0016884	Patz1	100	99.127	Mus_pahari
ENSPTRG00000014268	PATZ1	100	99.127	MGP_SPRETEiJ_G0016846	Patz1	100	99.127	Mus_spretus
ENSPTRG00000014268	PATZ1	100	99.220	ENSMLUG00000009942	PATZ1	100	99.220	Myotis_lucifugus
ENSPTRG00000014268	PATZ1	100	99.418	ENSNGAG00000010268	Patz1	100	99.418	Nannospalax_galili
ENSPTRG00000014268	PATZ1	100	60.039	ENSNBRG00000016032	patz1	100	59.768	Neolamprologus_brichardi
ENSPTRG00000014268	PATZ1	68	94.194	ENSMEUG00000016293	PATZ1	99	94.181	Notamacropus_eugenii
ENSPTRG00000014268	PATZ1	100	98.596	ENSODEG00000003589	PATZ1	100	98.596	Octodon_degus
ENSPTRG00000014268	PATZ1	100	58.918	ENSONIG00000004248	patz1	100	58.712	Oreochromis_niloticus
ENSPTRG00000014268	PATZ1	100	93.324	ENSOANG00000014654	PATZ1	100	93.614	Ornithorhynchus_anatinus
ENSPTRG00000014268	PATZ1	100	58.779	ENSORLG00020010937	patz1	100	58.626	Oryzias_latipes_hni
ENSPTRG00000014268	PATZ1	100	58.150	ENSORLG00015007396	patz1	100	58.003	Oryzias_latipes_hsok
ENSPTRG00000014268	PATZ1	100	57.459	ENSOMEG00000006636	patz1	100	57.459	Oryzias_melastigma
ENSPTRG00000014268	PATZ1	100	99.418	ENSOGAG00000027905	PATZ1	100	99.418	Otolemur_garnettii
ENSPTRG00000014268	PATZ1	100	100.000	ENSPPAG00000033227	PATZ1	100	100.000	Pan_paniscus
ENSPTRG00000014268	PATZ1	100	99.532	ENSPPRG00000001573	PATZ1	100	99.532	Panthera_pardus
ENSPTRG00000014268	PATZ1	86	99.494	ENSPTIG00000007937	PATZ1	91	99.494	Panthera_tigris_altaica
ENSPTRG00000014268	PATZ1	100	99.854	ENSPANG00000006821	PATZ1	100	99.854	Papio_anubis
ENSPTRG00000014268	PATZ1	100	62.313	ENSPKIG00000019584	patz1	100	61.567	Paramormyrops_kingsleyae
ENSPTRG00000014268	PATZ1	60	83.293	ENSPSIG00000016553	-	91	83.051	Pelodiscus_sinensis
ENSPTRG00000014268	PATZ1	58	95.960	ENSPSIG00000011562	-	100	96.571	Pelodiscus_sinensis
ENSPTRG00000014268	PATZ1	100	57.022	ENSPMGG00000010196	patz1	100	57.022	Periophthalmus_magnuspinnatus
ENSPTRG00000014268	PATZ1	100	99.064	ENSPEMG00000005321	Patz1	100	99.064	Peromyscus_maniculatus_bairdii
ENSPTRG00000014268	PATZ1	100	57.478	ENSPLAG00000010425	patz1	100	57.625	Poecilia_latipinna
ENSPTRG00000014268	PATZ1	100	57.562	ENSPMEG00000000255	patz1	100	57.709	Poecilia_mexicana
ENSPTRG00000014268	PATZ1	100	57.044	ENSPREG00000002440	patz1	100	57.182	Poecilia_reticulata
ENSPTRG00000014268	PATZ1	100	99.709	ENSPPYG00000011732	PATZ1	100	99.709	Pongo_abelii
ENSPTRG00000014268	PATZ1	100	99.532	ENSPCOG00000019729	PATZ1	100	99.532	Propithecus_coquereli
ENSPTRG00000014268	PATZ1	100	99.563	ENSPVAG00000001749	PATZ1	100	99.563	Pteropus_vampyrus
ENSPTRG00000014268	PATZ1	100	59.244	ENSPNYG00000013542	patz1	100	58.906	Pundamilia_nyererei
ENSPTRG00000014268	PATZ1	84	60.292	ENSPNAG00000017222	patz1	99	59.325	Pygocentrus_nattereri
ENSPTRG00000014268	PATZ1	100	99.854	ENSRBIG00000044231	PATZ1	100	99.854	Rhinopithecus_bieti
ENSPTRG00000014268	PATZ1	100	99.854	ENSRROG00000037155	PATZ1	100	99.854	Rhinopithecus_roxellana
ENSPTRG00000014268	PATZ1	100	99.854	ENSSBOG00000003894	PATZ1	100	99.854	Saimiri_boliviensis_boliviensis
ENSPTRG00000014268	PATZ1	79	88.462	ENSSFOG00015013244	patz1	78	88.462	Scleropages_formosus
ENSPTRG00000014268	PATZ1	100	87.198	ENSSPUG00000015298	PATZ1	100	86.771	Sphenodon_punctatus
ENSPTRG00000014268	PATZ1	85	98.969	ENSSSCG00000010027	PATZ1	100	99.074	Sus_scrofa
ENSPTRG00000014268	PATZ1	100	58.264	ENSTRUG00000015366	patz1	100	57.676	Takifugu_rubripes
ENSPTRG00000014268	PATZ1	100	99.272	ENSTTRG00000010279	PATZ1	100	99.272	Tursiops_truncatus
ENSPTRG00000014268	PATZ1	100	99.532	ENSUAMG00000015014	PATZ1	100	99.532	Ursus_americanus
ENSPTRG00000014268	PATZ1	100	73.043	ENSXETG00000004190	patz1	100	72.319	Xenopus_tropicalis
ENSPTRG00000014268	PATZ1	100	57.856	ENSXMAG00000015531	patz1	100	58.003	Xiphophorus_maculatus