EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPTRG00000014387 (Gene tree)
Gene ID: -
Gene Symbol: APOBEC3G
Alias: -
Full Name: apolipoprotein B mRNA editing enzyme catalytic subunit 3G
Gene Type: protein_coding
Species: Pan_troglodytes
Status: putative
Strand: Plus strand
Length: 11485 bases
Position: chr22:25651533-25663017
Accession: 6684
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTRP00000024786	APOBEC_N	PF08210.11	7.5e-85	1	2
ENSPTRP00000024786	APOBEC_N	PF08210.11	7.5e-85	2	2
ENSPTRP00000024786	APOBEC_C	PF05240.14	8.5e-63	1	2
ENSPTRP00000024786	APOBEC_C	PF05240.14	8.5e-63	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTRT00000026888	-	2547	XM_016939191	ENSPTRP00000024786	384 (aa)	XP_016794680	H2QLP9

Gene Model

Click here to download ENSPTRG00000014387's gene model file

Pathways

Pathway ID	Pathway Name	Source
ptr05170	Human immunodeficiency virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000014387's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPTRG00000014387	APOBEC3G	97	30.392	ENSPTRG00000029679	APOBEC2	80	30.882
ENSPTRG00000014387	APOBEC3G	99	47.532	ENSPTRG00000014385	APOBEC3C	100	47.532
ENSPTRG00000014387	APOBEC3G	98	65.464	ENSPTRG00000014384	APOBEC3B	96	65.464
ENSPTRG00000014387	APOBEC3G	95	43.784	ENSPTRG00000004640	AICDA	88	43.784
ENSPTRG00000014387	APOBEC3G	67	43.590	ENSPTRG00000004614	APOBEC1	71	43.590
ENSPTRG00000014387	APOBEC3G	73	39.860	ENSPTRG00000014390	APOBEC3H	98	38.608
ENSPTRG00000014387	APOBEC3G	97	48.792	ENSPTRG00000041588	APOBEC3D	100	48.792

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTRG00000014387	APOBEC3G	100	95.052	ENSG00000239713	APOBEC3G	100	95.052	Homo_sapiens
ENSPTRG00000014387	APOBEC3G	97	50.262	ENSAMEG00000010815	-	91	50.262	Ailuropoda_melanoleuca
ENSPTRG00000014387	APOBEC3G	96	63.978	ENSANAG00000020573	-	93	63.978	Aotus_nancymaae
ENSPTRG00000014387	APOBEC3G	98	65.699	ENSANAG00000028416	-	99	65.699	Aotus_nancymaae
ENSPTRG00000014387	APOBEC3G	99	70.235	ENSANAG00000031271	APOBEC3G	99	70.235	Aotus_nancymaae
ENSPTRG00000014387	APOBEC3G	94	65.110	ENSANAG00000027961	-	99	65.110	Aotus_nancymaae
ENSPTRG00000014387	APOBEC3G	97	52.332	ENSBTAG00000037800	-	100	52.332	Bos_taurus
ENSPTRG00000014387	APOBEC3G	94	61.140	ENSCJAG00000011578	-	78	61.140	Callithrix_jacchus
ENSPTRG00000014387	APOBEC3G	99	67.624	ENSCJAG00000023368	APOBEC3G	99	67.624	Callithrix_jacchus
ENSPTRG00000014387	APOBEC3G	65	52.000	ENSCAFG00000023589	-	90	52.000	Canis_familiaris
ENSPTRG00000014387	APOBEC3G	99	45.000	ENSCAFG00000015211	-	98	45.000	Canis_familiaris
ENSPTRG00000014387	APOBEC3G	80	43.719	ENSCAFG00020002641	-	84	42.254	Canis_lupus_dingo
ENSPTRG00000014387	APOBEC3G	96	45.455	ENSCAFG00020002661	-	84	42.453	Canis_lupus_dingo
ENSPTRG00000014387	APOBEC3G	97	50.521	ENSCHIG00000012694	-	93	51.075	Capra_hircus
ENSPTRG00000014387	APOBEC3G	98	67.460	ENSCCAG00000033147	-	93	67.925	Cebus_capucinus
ENSPTRG00000014387	APOBEC3G	99	64.491	ENSCCAG00000032232	-	99	64.491	Cebus_capucinus
ENSPTRG00000014387	APOBEC3G	97	66.933	ENSCCAG00000032509	-	99	66.933	Cebus_capucinus
ENSPTRG00000014387	APOBEC3G	97	63.492	ENSCCAG00000030928	-	92	63.492	Cebus_capucinus
ENSPTRG00000014387	APOBEC3G	98	76.353	ENSCSAG00000006376	APOBEC3G	87	76.353	Chlorocebus_sabaeus
ENSPTRG00000014387	APOBEC3G	97	73.029	ENSCANG00000029968	-	74	73.029	Colobus_angolensis_palliatus
ENSPTRG00000014387	APOBEC3G	91	36.559	ENSDNOG00000039749	-	78	37.097	Dasypus_novemcinctus
ENSPTRG00000014387	APOBEC3G	96	54.404	ENSEASG00005018643	-	86	52.500	Equus_asinus_asinus
ENSPTRG00000014387	APOBEC3G	96	53.403	ENSECAG00000022371	APOBEC3Z1B	85	53.403	Equus_caballus
ENSPTRG00000014387	APOBEC3G	97	52.577	ENSECAG00000032756	-	66	52.577	Equus_caballus
ENSPTRG00000014387	APOBEC3G	99	94.906	ENSGGOG00000013750	APOBEC3G	99	94.906	Gorilla_gorilla
ENSPTRG00000014387	APOBEC3G	97	52.941	ENSLAFG00000008890	-	91	52.941	Loxodonta_africana
ENSPTRG00000014387	APOBEC3G	96	45.876	ENSLAFG00000020906	-	95	49.444	Loxodonta_africana
ENSPTRG00000014387	APOBEC3G	97	54.839	ENSLAFG00000005275	-	99	54.839	Loxodonta_africana
ENSPTRG00000014387	APOBEC3G	99	77.105	ENSMFAG00000044711	APOBEC3G	88	77.105	Macaca_fascicularis
ENSPTRG00000014387	APOBEC3G	99	77.953	ENSMMUG00000039346	APOBEC3G	96	77.953	Macaca_mulatta
ENSPTRG00000014387	APOBEC3G	99	77.895	ENSMNEG00000038847	APOBEC3G	96	77.895	Macaca_nemestrina
ENSPTRG00000014387	APOBEC3G	99	79.365	ENSMLEG00000024444	APOBEC3G	95	79.365	Mandrillus_leucophaeus
ENSPTRG00000014387	APOBEC3G	96	55.376	ENSMICG00000047191	-	99	55.376	Microcebus_murinus
ENSPTRG00000014387	APOBEC3G	99	57.754	ENSMICG00000043748	-	97	57.754	Microcebus_murinus
ENSPTRG00000014387	APOBEC3G	93	50.267	ENSMPUG00000013235	-	96	50.267	Mustela_putorius_furo
ENSPTRG00000014387	APOBEC3G	94	47.024	ENSMLUG00000026771	-	96	47.024	Myotis_lucifugus
ENSPTRG00000014387	APOBEC3G	92	42.268	ENSMLUG00000028652	-	90	42.132	Myotis_lucifugus
ENSPTRG00000014387	APOBEC3G	83	43.202	ENSMLUG00000024853	-	100	43.202	Myotis_lucifugus
ENSPTRG00000014387	APOBEC3G	59	48.649	ENSMLUG00000022226	-	90	48.649	Myotis_lucifugus
ENSPTRG00000014387	APOBEC3G	85	48.352	ENSMLUG00000000517	-	100	48.352	Myotis_lucifugus
ENSPTRG00000014387	APOBEC3G	91	48.128	ENSMLUG00000023022	-	88	48.128	Myotis_lucifugus
ENSPTRG00000014387	APOBEC3G	85	53.077	ENSMLUG00000008631	-	100	53.077	Myotis_lucifugus
ENSPTRG00000014387	APOBEC3G	96	39.362	ENSMLUG00000000977	-	96	39.362	Myotis_lucifugus
ENSPTRG00000014387	APOBEC3G	91	44.974	ENSMLUG00000014565	-	100	44.974	Myotis_lucifugus
ENSPTRG00000014387	APOBEC3G	96	46.524	ENSMLUG00000024957	-	91	46.524	Myotis_lucifugus
ENSPTRG00000014387	APOBEC3G	97	70.149	ENSNLEG00000018922	-	100	70.149	Nomascus_leucogenys
ENSPTRG00000014387	APOBEC3G	92	49.730	ENSOPRG00000002326	-	98	49.730	Ochotona_princeps
ENSPTRG00000014387	APOBEC3G	90	48.387	ENSOCUG00000023532	-	70	48.387	Oryctolagus_cuniculus
ENSPTRG00000014387	APOBEC3G	96	61.376	ENSOGAG00000032518	-	98	61.376	Otolemur_garnettii
ENSPTRG00000014387	APOBEC3G	96	56.545	ENSOGAG00000024822	-	94	56.545	Otolemur_garnettii
ENSPTRG00000014387	APOBEC3G	97	51.832	ENSOARG00000016213	APOBEC3Z1	100	51.832	Ovis_aries
ENSPTRG00000014387	APOBEC3G	96	95.562	ENSPPAG00000033277	-	82	95.562	Pan_paniscus
ENSPTRG00000014387	APOBEC3G	100	86.198	ENSPPYG00000011833	APOBEC3G	96	86.198	Pongo_abelii
ENSPTRG00000014387	APOBEC3G	96	44.986	ENSPCAG00000015518	-	76	44.986	Procavia_capensis
ENSPTRG00000014387	APOBEC3G	67	53.488	ENSPCAG00000001848	-	94	53.488	Procavia_capensis
ENSPTRG00000014387	APOBEC3G	92	55.367	ENSPCOG00000016357	-	88	55.367	Propithecus_coquereli
ENSPTRG00000014387	APOBEC3G	97	51.323	ENSPVAG00000004045	-	95	51.323	Pteropus_vampyrus
ENSPTRG00000014387	APOBEC3G	97	79.062	ENSRBIG00000035436	APOBEC3G	99	74.713	Rhinopithecus_bieti
ENSPTRG00000014387	APOBEC3G	100	65.195	ENSSBOG00000021384	-	99	65.195	Saimiri_boliviensis_boliviensis
ENSPTRG00000014387	APOBEC3G	96	62.903	ENSSBOG00000029091	-	90	62.903	Saimiri_boliviensis_boliviensis
ENSPTRG00000014387	APOBEC3G	97	65.605	ENSSBOG00000018208	-	99	65.605	Saimiri_boliviensis_boliviensis
ENSPTRG00000014387	APOBEC3G	100	70.207	ENSSBOG00000023468	-	81	70.207	Saimiri_boliviensis_boliviensis
ENSPTRG00000014387	APOBEC3G	97	60.322	ENSSBOG00000025673	-	99	60.322	Saimiri_boliviensis_boliviensis
ENSPTRG00000014387	APOBEC3G	99	67.624	ENSSBOG00000026566	-	99	67.624	Saimiri_boliviensis_boliviensis
ENSPTRG00000014387	APOBEC3G	92	50.532	ENSTTRG00000009395	-	94	50.532	Tursiops_truncatus
ENSPTRG00000014387	APOBEC3G	91	49.741	ENSUMAG00000014447	-	95	49.741	Ursus_maritimus
ENSPTRG00000014387	APOBEC3G	93	49.744	ENSUMAG00000002249	-	90	49.744	Ursus_maritimus