EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPTRG00000014555 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: RAB%2C member of RAS oncogene family like 2A
Gene Type: protein_coding
Species: Pan_troglodytes
Status: putative
Strand: Plus strand
Length: 13252 bases
Position: chr2B:9634-22885
Accession: 742840
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTRP00000058452	MMR_HSR1	PF01926.23	0.00013	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTRT00000066875	-	714	XM_009443144	ENSPTRP00000058452	237 (aa)	XP_009441419	H2RD86
ENSPTRT00000083763	-	495	XM_016949569	ENSPTRP00000064191	164 (aa)	XP_016805059	A0A2I3RHN0
ENSPTRT00000110717	-	618	-	ENSPTRP00000078065	205 (aa)	-	A0A2I3SM70
ENSPTRT00000096383	-	267	-	ENSPTRP00000091610	89 (aa)	-	A0A2I3TRL8

Gene Model

Click here to download ENSPTRG00000014555's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000014555's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPTRG00000014555	-	61	35.897	ENSPTRG00000021673	RAB9A	76	35.897
ENSPTRG00000014555	-	62	30.065	ENSPTRG00000044137	RAB6A	74	30.065
ENSPTRG00000014555	-	63	35.032	ENSPTRG00000044969	RAB22A	80	35.032
ENSPTRG00000014555	-	63	32.468	ENSPTRG00000005524	RAB35	77	32.468
ENSPTRG00000014555	-	66	30.247	ENSPTRG00000048374	RAB6B	77	30.247
ENSPTRG00000014555	-	62	30.719	ENSPTRG00000048400	-	72	30.719
ENSPTRG00000014555	-	61	32.667	ENSPTRG00000006125	-	82	32.667
ENSPTRG00000014555	-	66	36.747	ENSPTRG00000003915	RAB1B	83	36.747
ENSPTRG00000014555	-	62	30.719	ENSPTRG00000042083	RAB39B	72	30.719
ENSPTRG00000014555	-	66	35.366	ENSPTRG00000011989	RAB1A	81	35.366
ENSPTRG00000014555	-	63	31.613	ENSPTRG00000020284	RAB2A	70	35.659
ENSPTRG00000014555	-	66	35.185	ENSPTRG00000005071	RAB5B	74	35.185
ENSPTRG00000014555	-	66	35.185	ENSPTRG00000014682	RAB5A	74	35.185
ENSPTRG00000014555	-	70	33.140	ENSPTRG00000004125	RAB30	84	33.140
ENSPTRG00000014555	-	66	34.731	ENSPTRG00000016455	RAB33B	72	34.731
ENSPTRG00000014555	-	59	38.889	ENSPTRG00000002384	RAB18	70	38.889
ENSPTRG00000014555	-	61	30.872	ENSPTRG00000001446	RAB25	70	30.872
ENSPTRG00000014555	-	61	35.032	ENSPTRG00000028227	RAB9B	77	35.032
ENSPTRG00000014555	-	71	33.908	ENSPTRG00000009853	RAB12	80	32.381
ENSPTRG00000014555	-	64	35.000	ENSPTRG00000015359	RAB7A	77	35.000
ENSPTRG00000014555	-	66	34.568	ENSPTRG00000009194	RAB5C	74	34.568
ENSPTRG00000014555	-	68	35.152	ENSPTRG00000021312	RAB14	76	35.152
ENSPTRG00000014555	-	67	34.756	ENSPTRG00000010422	RAB11B	74	34.756
ENSPTRG00000014555	-	61	37.584	ENSPTRG00000044358	-	71	37.415

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTRG00000014555	-	100	97.479	ENSG00000079974	RABL2B	100	100.000	Homo_sapiens
ENSPTRG00000014555	-	100	97.059	ENSG00000144134	RABL2A	100	98.246	Homo_sapiens
ENSPTRG00000014555	-	96	69.565	ENSAPOG00000023708	rabl2	99	69.565	Acanthochromis_polyacanthus
ENSPTRG00000014555	-	97	82.128	ENSAMEG00000003173	-	99	82.128	Ailuropoda_melanoleuca
ENSPTRG00000014555	-	96	67.686	ENSACIG00000000670	rabl2	99	67.686	Amphilophus_citrinellus
ENSPTRG00000014555	-	96	70.000	ENSAOCG00000008069	rabl2	99	70.000	Amphiprion_ocellaris
ENSPTRG00000014555	-	96	69.130	ENSAPEG00000003164	rabl2	99	69.130	Amphiprion_percula
ENSPTRG00000014555	-	96	70.000	ENSATEG00000001111	rabl2	99	70.000	Anabas_testudineus
ENSPTRG00000014555	-	68	86.335	ENSACAG00000000418	-	91	86.335	Anolis_carolinensis
ENSPTRG00000014555	-	100	89.121	ENSANAG00000021001	-	100	89.121	Aotus_nancymaae
ENSPTRG00000014555	-	96	69.432	ENSACLG00000025632	rabl2	99	69.432	Astatotilapia_calliptera
ENSPTRG00000014555	-	97	70.996	ENSAMXG00000040611	rabl2	100	70.996	Astyanax_mexicanus
ENSPTRG00000014555	-	97	80.342	ENSBTAG00000004876	RABL2B	99	80.342	Bos_taurus
ENSPTRG00000014555	-	100	89.540	ENSCJAG00000018414	-	100	89.540	Callithrix_jacchus
ENSPTRG00000014555	-	97	84.848	ENSCAFG00020006938	-	99	84.848	Canis_lupus_dingo
ENSPTRG00000014555	-	89	85.915	ENSCHIG00000000591	-	99	80.335	Capra_hircus
ENSPTRG00000014555	-	100	83.682	ENSTSYG00000004323	-	100	83.682	Carlito_syrichta
ENSPTRG00000014555	-	95	85.022	ENSCPOG00000026899	-	98	85.022	Cavia_porcellus
ENSPTRG00000014555	-	100	90.795	ENSCCAG00000025944	-	100	90.795	Cebus_capucinus
ENSPTRG00000014555	-	100	89.540	ENSCATG00000034307	-	100	89.540	Cercocebus_atys
ENSPTRG00000014555	-	95	85.778	ENSCLAG00000017218	-	96	85.778	Chinchilla_lanigera
ENSPTRG00000014555	-	100	89.212	ENSCSAG00000004698	-	100	89.212	Chlorocebus_sabaeus
ENSPTRG00000014555	-	92	76.818	ENSCPBG00000011715	-	93	76.818	Chrysemys_picta_bellii
ENSPTRG00000014555	-	84	62.814	ENSCING00000004961	-	87	62.814	Ciona_intestinalis
ENSPTRG00000014555	-	82	62.755	ENSCSAVG00000006042	-	89	62.755	Ciona_savignyi
ENSPTRG00000014555	-	100	90.756	ENSCANG00000030879	-	100	90.756	Colobus_angolensis_palliatus
ENSPTRG00000014555	-	97	83.550	ENSCGRG00001021894	Rabl2	99	83.550	Cricetulus_griseus_chok1gshd
ENSPTRG00000014555	-	89	71.362	ENSCSEG00000005479	rabl2	94	70.136	Cynoglossus_semilaevis
ENSPTRG00000014555	-	94	70.536	ENSCVAG00000011432	rabl2	98	70.536	Cyprinodon_variegatus
ENSPTRG00000014555	-	96	69.869	ENSDARG00000063321	rabl2	99	69.869	Danio_rerio
ENSPTRG00000014555	-	97	84.348	ENSDNOG00000035151	-	99	84.348	Dasypus_novemcinctus
ENSPTRG00000014555	-	97	85.281	ENSDORG00000000003	Rabl2	99	85.281	Dipodomys_ordii
ENSPTRG00000014555	-	97	82.684	ENSEASG00005008239	-	99	82.684	Equus_asinus_asinus
ENSPTRG00000014555	-	97	82.251	ENSECAG00000026942	-	99	82.251	Equus_caballus
ENSPTRG00000014555	-	97	84.416	ENSFCAG00000033642	-	99	84.416	Felis_catus
ENSPTRG00000014555	-	100	80.753	ENSFDAG00000002113	-	100	80.753	Fukomys_damarensis
ENSPTRG00000014555	-	99	67.234	ENSFHEG00000015015	rabl2	85	67.234	Fundulus_heteroclitus
ENSPTRG00000014555	-	87	71.014	ENSGMOG00000018928	rabl2	100	71.014	Gadus_morhua
ENSPTRG00000014555	-	95	72.247	ENSGALG00000032458	RABL2B	97	72.247	Gallus_gallus
ENSPTRG00000014555	-	89	72.512	ENSGAFG00000005188	rabl2	95	70.485	Gambusia_affinis
ENSPTRG00000014555	-	96	68.696	ENSGACG00000012474	rabl2	99	68.696	Gasterosteus_aculeatus
ENSPTRG00000014555	-	96	69.432	ENSHBUG00000010964	rabl2	99	69.432	Haplochromis_burtoni
ENSPTRG00000014555	-	97	83.550	ENSHGLG00000005750	-	99	83.550	Heterocephalus_glaber_female
ENSPTRG00000014555	-	97	83.550	ENSHGLG00100016281	-	99	83.550	Heterocephalus_glaber_male
ENSPTRG00000014555	-	97	86.580	ENSSTOG00000002723	-	99	86.580	Ictidomys_tridecemlineatus
ENSPTRG00000014555	-	97	83.983	ENSJJAG00000010792	Rabl2	99	83.983	Jaculus_jaculus
ENSPTRG00000014555	-	96	70.000	ENSKMAG00000012723	rabl2	99	70.000	Kryptolebias_marmoratus
ENSPTRG00000014555	-	91	72.350	ENSLBEG00000003644	rabl2	93	72.350	Labrus_bergylta
ENSPTRG00000014555	-	96	72.727	ENSLACG00000003722	rabl2	99	72.727	Latimeria_chalumnae
ENSPTRG00000014555	-	95	72.566	ENSLOCG00000016767	rabl2	96	72.566	Lepisosteus_oculatus
ENSPTRG00000014555	-	100	90.756	ENSMFAG00000044775	-	100	90.756	Macaca_fascicularis
ENSPTRG00000014555	-	100	90.377	ENSMMUG00000022914	RABL2B	100	90.377	Macaca_mulatta
ENSPTRG00000014555	-	100	90.336	ENSMNEG00000028460	-	100	90.336	Macaca_nemestrina
ENSPTRG00000014555	-	100	89.916	ENSMLEG00000032621	-	100	89.916	Mandrillus_leucophaeus
ENSPTRG00000014555	-	96	69.130	ENSMAMG00000008168	rabl2	99	69.130	Mastacembelus_armatus
ENSPTRG00000014555	-	93	71.041	ENSMZEG00005019758	rabl2	98	71.041	Maylandia_zebra
ENSPTRG00000014555	-	97	83.117	ENSMAUG00000010955	Rabl2	99	83.117	Mesocricetus_auratus
ENSPTRG00000014555	-	100	88.235	ENSMICG00000031301	-	100	88.235	Microcebus_murinus
ENSPTRG00000014555	-	97	83.043	ENSMOCG00000002775	Rabl2	99	83.043	Microtus_ochrogaster
ENSPTRG00000014555	-	93	80.717	ENSMODG00000010838	-	97	80.717	Monodelphis_domestica
ENSPTRG00000014555	-	93	70.721	ENSMALG00000005944	rabl2	95	70.721	Monopterus_albus
ENSPTRG00000014555	-	97	80.087	MGP_CAROLIEiJ_G0020176	Rabl2	98	80.087	Mus_caroli
ENSPTRG00000014555	-	97	79.654	ENSMUSG00000022621	Rabl2	99	79.654	Mus_musculus
ENSPTRG00000014555	-	97	80.087	MGP_PahariEiJ_G0020181	Rabl2	99	80.087	Mus_pahari
ENSPTRG00000014555	-	97	79.221	MGP_SPRETEiJ_G0021073	Rabl2	99	79.221	Mus_spretus
ENSPTRG00000014555	-	97	83.983	ENSMPUG00000001806	-	99	83.983	Mustela_putorius_furo
ENSPTRG00000014555	-	94	83.036	ENSNGAG00000012843	Rabl2	93	83.036	Nannospalax_galili
ENSPTRG00000014555	-	96	69.432	ENSNBRG00000000489	rabl2	99	69.432	Neolamprologus_brichardi
ENSPTRG00000014555	-	100	91.597	ENSNLEG00000030435	-	100	91.597	Nomascus_leucogenys
ENSPTRG00000014555	-	95	84.889	ENSODEG00000015650	-	96	84.889	Octodon_degus
ENSPTRG00000014555	-	100	67.083	ENSONIG00000014885	rabl2	99	69.869	Oreochromis_niloticus
ENSPTRG00000014555	-	91	69.124	ENSORLG00000009874	rabl2	92	69.124	Oryzias_latipes
ENSPTRG00000014555	-	91	69.124	ENSORLG00020001721	rabl2	92	69.124	Oryzias_latipes_hni
ENSPTRG00000014555	-	91	69.124	ENSORLG00015014268	rabl2	92	69.124	Oryzias_latipes_hsok
ENSPTRG00000014555	-	91	70.046	ENSOMEG00000008576	rabl2	95	70.046	Oryzias_melastigma
ENSPTRG00000014555	-	100	86.611	ENSOGAG00000009123	-	100	86.611	Otolemur_garnettii
ENSPTRG00000014555	-	95	85.463	ENSPPRG00000014642	-	96	85.463	Panthera_pardus
ENSPTRG00000014555	-	97	84.416	ENSPTIG00000018747	-	99	84.416	Panthera_tigris_altaica
ENSPTRG00000014555	-	100	93.697	ENSPANG00000036121	-	100	93.697	Papio_anubis
ENSPTRG00000014555	-	86	76.214	ENSPKIG00000025372	rabl2	88	76.214	Paramormyrops_kingsleyae
ENSPTRG00000014555	-	92	78.182	ENSPSIG00000014041	-	93	78.182	Pelodiscus_sinensis
ENSPTRG00000014555	-	87	70.531	ENSPMGG00000012946	rabl2	96	70.531	Periophthalmus_magnuspinnatus
ENSPTRG00000014555	-	97	81.818	ENSPEMG00000024045	Rabl2	99	81.818	Peromyscus_maniculatus_bairdii
ENSPTRG00000014555	-	87	84.615	ENSPCIG00000012436	-	81	84.615	Phascolarctos_cinereus
ENSPTRG00000014555	-	94	71.556	ENSPFOG00000017960	rabl2	96	71.556	Poecilia_formosa
ENSPTRG00000014555	-	94	72.197	ENSPLAG00000015685	rabl2	96	72.197	Poecilia_latipinna
ENSPTRG00000014555	-	94	72.197	ENSPMEG00000004703	rabl2	96	72.197	Poecilia_mexicana
ENSPTRG00000014555	-	87	72.947	ENSPREG00000014761	rabl2	96	72.947	Poecilia_reticulata
ENSPTRG00000014555	-	100	90.795	ENSPPYG00000012000	-	100	90.795	Pongo_abelii
ENSPTRG00000014555	-	100	87.448	ENSPCOG00000024865	-	100	87.448	Propithecus_coquereli
ENSPTRG00000014555	-	99	85.654	ENSPVAG00000004539	-	100	85.654	Pteropus_vampyrus
ENSPTRG00000014555	-	96	69.432	ENSPNYG00000004845	rabl2	99	69.432	Pundamilia_nyererei
ENSPTRG00000014555	-	89	75.829	ENSPNAG00000024254	rabl2	100	71.674	Pygocentrus_nattereri
ENSPTRG00000014555	-	97	81.385	ENSRNOG00000013947	Rabl2	88	81.385	Rattus_norvegicus
ENSPTRG00000014555	-	100	89.496	ENSRBIG00000033607	-	100	89.496	Rhinopithecus_bieti
ENSPTRG00000014555	-	100	90.336	ENSRROG00000031130	-	100	90.336	Rhinopithecus_roxellana
ENSPTRG00000014555	-	100	90.377	ENSSBOG00000033266	-	100	90.377	Saimiri_boliviensis_boliviensis
ENSPTRG00000014555	-	89	73.585	ENSSFOG00015020738	rabl2	100	69.099	Scleropages_formosus
ENSPTRG00000014555	-	91	72.350	ENSSMAG00000004606	rabl2	93	72.350	Scophthalmus_maximus
ENSPTRG00000014555	-	97	69.528	ENSSDUG00000014765	rabl2	100	69.528	Seriola_dumerili
ENSPTRG00000014555	-	71	90.000	ENSSSCG00000025041	-	100	90.000	Sus_scrofa
ENSPTRG00000014555	-	90	72.222	ENSTGUG00000016028	-	99	72.222	Taeniopygia_guttata
ENSPTRG00000014555	-	96	69.565	ENSTRUG00000012454	rabl2	99	69.565	Takifugu_rubripes
ENSPTRG00000014555	-	96	69.130	ENSTNIG00000017951	rabl2	99	69.130	Tetraodon_nigroviridis
ENSPTRG00000014555	-	100	78.903	ENSUAMG00000015761	-	98	78.903	Ursus_americanus
ENSPTRG00000014555	-	97	84.416	ENSUMAG00000017116	-	99	84.416	Ursus_maritimus
ENSPTRG00000014555	-	97	83.983	ENSVVUG00000025761	-	99	83.983	Vulpes_vulpes
ENSPTRG00000014555	-	100	70.954	ENSXETG00000015712	rabl2b	100	70.954	Xenopus_tropicalis
ENSPTRG00000014555	-	86	75.122	ENSXMAG00000004569	rabl2	96	71.429	Xiphophorus_maculatus