EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPTRG00000015157 (Gene tree)
Gene ID: 100614564
Gene Symbol: CMSS1
Alias: -
Full Name: cms1 ribosomal small subunit homolog
Gene Type: protein_coding
Species: Pan_troglodytes
Status: putative
Strand: Plus strand
Length: 366272 bases
Position: chr3:102503355-102869626
Accession: 57112
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTRP00000085022	CMS1	PF14617.6	3.6e-32	1	1
ENSPTRP00000026158	CMS1	PF14617.6	4.4e-32	1	1
ENSPTRP00000085943	CMS1	PF14617.6	5.4e-32	1	1
ENSPTRP00000087549	CMS1	PF14617.6	5.5e-32	1	1
ENSPTRP00000026158	DEAD	PF00270.29	1.6e-05	1	1
ENSPTRP00000085022	DEAD	PF00270.29	1.7e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTRT00000028345	-	1130	XM_003309920	ENSPTRP00000026158	261 (aa)	XP_003309968	H2QN02
ENSPTRT00000101200	-	826	XM_009445995	ENSPTRP00000085022	245 (aa)	XP_009444270	A0A2I3T753
ENSPTRT00000078453	-	834	-	ENSPTRP00000085943	277 (aa)	-	A0A2I3T9S4
ENSPTRT00000101828	-	840	XM_003309919	ENSPTRP00000087549	279 (aa)	XP_003309967	K7A0J3

Gene Model

Click here to download ENSPTRG00000015157's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000015157's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTRG00000015157	CMSS1	100	98.208	ENSG00000184220	CMSS1	100	98.208	Homo_sapiens
ENSPTRG00000015157	CMSS1	82	64.356	ENSAPOG00000010604	cmss1	96	59.322	Acanthochromis_polyacanthus
ENSPTRG00000015157	CMSS1	99	90.204	ENSAMEG00000004092	CMSS1	100	89.575	Ailuropoda_melanoleuca
ENSPTRG00000015157	CMSS1	82	53.960	ENSACIG00000021854	cmss1	75	53.960	Amphilophus_citrinellus
ENSPTRG00000015157	CMSS1	100	50.512	ENSAOCG00000013361	cmss1	100	52.508	Amphiprion_ocellaris
ENSPTRG00000015157	CMSS1	82	64.356	ENSAPEG00000005829	cmss1	100	52.333	Amphiprion_percula
ENSPTRG00000015157	CMSS1	100	52.862	ENSATEG00000008209	cmss1	100	53.767	Anabas_testudineus
ENSPTRG00000015157	CMSS1	93	68.696	ENSAPLG00000010542	CMSS1	100	68.696	Anas_platyrhynchos
ENSPTRG00000015157	CMSS1	98	67.078	ENSACAG00000011065	CMSS1	98	63.433	Anolis_carolinensis
ENSPTRG00000015157	CMSS1	100	93.878	ENSANAG00000023565	CMSS1	100	93.214	Aotus_nancymaae
ENSPTRG00000015157	CMSS1	100	49.013	ENSACLG00000027294	cmss1	100	49.671	Astatotilapia_calliptera
ENSPTRG00000015157	CMSS1	100	45.847	ENSAMXG00000002046	cmss1	100	47.297	Astyanax_mexicanus
ENSPTRG00000015157	CMSS1	100	86.738	ENSBTAG00000013663	CMSS1	100	86.738	Bos_taurus
ENSPTRG00000015157	CMSS1	100	93.878	ENSCJAG00000000610	CMSS1	100	93.214	Callithrix_jacchus
ENSPTRG00000015157	CMSS1	100	91.020	ENSCAFG00000009230	CMSS1	95	89.655	Canis_familiaris
ENSPTRG00000015157	CMSS1	83	92.118	ENSCAFG00020024156	-	68	87.500	Canis_lupus_dingo
ENSPTRG00000015157	CMSS1	100	91.020	ENSCAFG00020009464	-	95	89.961	Canis_lupus_dingo
ENSPTRG00000015157	CMSS1	99	88.525	ENSCHIG00000013003	CMSS1	93	87.938	Capra_hircus
ENSPTRG00000015157	CMSS1	100	89.388	ENSTSYG00000009266	CMSS1	99	89.189	Carlito_syrichta
ENSPTRG00000015157	CMSS1	91	72.368	ENSCAPG00000013584	CMSS1	87	79.058	Cavia_aperea
ENSPTRG00000015157	CMSS1	100	87.755	ENSCPOG00000014680	CMSS1	100	86.022	Cavia_porcellus
ENSPTRG00000015157	CMSS1	100	94.694	ENSCCAG00000034685	CMSS1	100	94.643	Cebus_capucinus
ENSPTRG00000015157	CMSS1	100	97.143	ENSCATG00000031980	CMSS1	100	96.935	Cercocebus_atys
ENSPTRG00000015157	CMSS1	93	93.450	ENSCLAG00000011241	CMSS1	98	93.450	Chinchilla_lanigera
ENSPTRG00000015157	CMSS1	100	97.143	ENSCSAG00000006024	CMSS1	100	97.143	Chlorocebus_sabaeus
ENSPTRG00000015157	CMSS1	100	69.388	ENSCHOG00000012098	CMSS1	100	69.176	Choloepus_hoffmanni
ENSPTRG00000015157	CMSS1	77	41.327	ENSCING00000014848	-	100	41.711	Ciona_intestinalis
ENSPTRG00000015157	CMSS1	51	41.270	ENSCSAVG00000002309	-	99	41.270	Ciona_savignyi
ENSPTRG00000015157	CMSS1	100	96.327	ENSCANG00000031337	CMSS1	100	96.057	Colobus_angolensis_palliatus
ENSPTRG00000015157	CMSS1	100	83.265	ENSCGRG00001014305	Cmss1	100	81.004	Cricetulus_griseus_chok1gshd
ENSPTRG00000015157	CMSS1	100	83.673	ENSCGRG00000006722	Cmss1	99	82.745	Cricetulus_griseus_crigri
ENSPTRG00000015157	CMSS1	100	50.505	ENSCSEG00000004958	cmss1	100	50.820	Cynoglossus_semilaevis
ENSPTRG00000015157	CMSS1	100	51.211	ENSCVAG00000005039	cmss1	100	52.577	Cyprinodon_variegatus
ENSPTRG00000015157	CMSS1	100	45.667	ENSDARG00000112579	cmss1	100	47.797	Danio_rerio
ENSPTRG00000015157	CMSS1	100	86.531	ENSDNOG00000040418	CMSS1	93	84.733	Dasypus_novemcinctus
ENSPTRG00000015157	CMSS1	100	88.980	ENSDORG00000010461	Cmss1	100	86.738	Dipodomys_ordii
ENSPTRG00000015157	CMSS1	54	49.242	ENSEBUG00000002156	-	96	49.242	Eptatretus_burgeri
ENSPTRG00000015157	CMSS1	93	92.544	ENSEASG00005010966	CMSS1	99	92.694	Equus_asinus_asinus
ENSPTRG00000015157	CMSS1	99	89.754	ENSECAG00000015662	CMSS1	99	91.593	Equus_caballus
ENSPTRG00000015157	CMSS1	100	56.272	ENSEEUG00000007624	-	100	56.272	Erinaceus_europaeus
ENSPTRG00000015157	CMSS1	100	47.573	ENSELUG00000019459	cmss1	100	51.333	Esox_lucius
ENSPTRG00000015157	CMSS1	100	92.653	ENSFCAG00000044577	CMSS1	100	92.115	Felis_catus
ENSPTRG00000015157	CMSS1	96	64.407	ENSFALG00000005816	CMSS1	99	64.407	Ficedula_albicollis
ENSPTRG00000015157	CMSS1	93	90.789	ENSFDAG00000012577	CMSS1	100	90.789	Fukomys_damarensis
ENSPTRG00000015157	CMSS1	93	60.606	ENSFHEG00000012008	cmss1	95	60.606	Fundulus_heteroclitus
ENSPTRG00000015157	CMSS1	99	50.515	ENSGMOG00000016729	cmss1	100	52.448	Gadus_morhua
ENSPTRG00000015157	CMSS1	97	67.511	ENSGALG00000015267	CMSS1	100	63.602	Gallus_gallus
ENSPTRG00000015157	CMSS1	84	63.285	ENSGAFG00000021217	cmss1	77	63.366	Gambusia_affinis
ENSPTRG00000015157	CMSS1	99	48.227	ENSGACG00000002798	cmss1	100	48.746	Gasterosteus_aculeatus
ENSPTRG00000015157	CMSS1	96	70.940	ENSGAGG00000019861	CMSS1	91	70.940	Gopherus_agassizii
ENSPTRG00000015157	CMSS1	100	98.776	ENSGGOG00000014125	CMSS1	100	98.084	Gorilla_gorilla
ENSPTRG00000015157	CMSS1	100	48.980	ENSHBUG00000008431	cmss1	100	50.000	Haplochromis_burtoni
ENSPTRG00000015157	CMSS1	93	90.749	ENSHGLG00000019481	CMSS1	100	84.585	Heterocephalus_glaber_female
ENSPTRG00000015157	CMSS1	99	86.475	ENSHGLG00100010314	CMSS1	100	84.825	Heterocephalus_glaber_male
ENSPTRG00000015157	CMSS1	100	53.356	ENSHCOG00000003222	cmss1	100	54.054	Hippocampus_comes
ENSPTRG00000015157	CMSS1	100	47.157	ENSIPUG00000011591	cmss1	100	48.630	Ictalurus_punctatus
ENSPTRG00000015157	CMSS1	99	91.393	ENSSTOG00000019366	CMSS1	100	89.964	Ictidomys_tridecemlineatus
ENSPTRG00000015157	CMSS1	99	86.420	ENSJJAG00000014894	Cmss1	100	83.513	Jaculus_jaculus
ENSPTRG00000015157	CMSS1	82	53.960	ENSKMAG00000002390	cmss1	81	53.960	Kryptolebias_marmoratus
ENSPTRG00000015157	CMSS1	90	52.917	ENSLBEG00000006298	cmss1	83	58.621	Labrus_bergylta
ENSPTRG00000015157	CMSS1	93	63.913	ENSLACG00000009293	CMSS1	100	63.913	Latimeria_chalumnae
ENSPTRG00000015157	CMSS1	100	51.056	ENSLOCG00000009391	cmss1	100	51.408	Lepisosteus_oculatus
ENSPTRG00000015157	CMSS1	93	90.351	ENSLAFG00000017509	CMSS1	100	90.351	Loxodonta_africana
ENSPTRG00000015157	CMSS1	100	97.551	ENSMFAG00000045006	CMSS1	100	97.318	Macaca_fascicularis
ENSPTRG00000015157	CMSS1	100	97.143	ENSMMUG00000002939	CMSS1	100	96.935	Macaca_mulatta
ENSPTRG00000015157	CMSS1	100	97.143	ENSMNEG00000031315	CMSS1	100	96.935	Macaca_nemestrina
ENSPTRG00000015157	CMSS1	100	96.735	ENSMLEG00000033660	CMSS1	100	96.552	Mandrillus_leucophaeus
ENSPTRG00000015157	CMSS1	100	51.974	ENSMAMG00000017176	cmss1	100	53.103	Mastacembelus_armatus
ENSPTRG00000015157	CMSS1	100	49.013	ENSMZEG00005021886	cmss1	100	49.671	Maylandia_zebra
ENSPTRG00000015157	CMSS1	93	67.982	ENSMGAG00000014360	CMSS1	100	67.982	Meleagris_gallopavo
ENSPTRG00000015157	CMSS1	100	59.498	ENSMAUG00000020609	Cmss1	100	59.498	Mesocricetus_auratus
ENSPTRG00000015157	CMSS1	100	92.653	ENSMICG00000048977	CMSS1	100	91.756	Microcebus_murinus
ENSPTRG00000015157	CMSS1	100	82.449	ENSMOCG00000021937	Cmss1	100	81.720	Microtus_ochrogaster
ENSPTRG00000015157	CMSS1	82	61.881	ENSMMOG00000019794	cmss1	95	57.082	Mola_mola
ENSPTRG00000015157	CMSS1	100	75.510	ENSMODG00000002275	CMSS1	98	72.137	Monodelphis_domestica
ENSPTRG00000015157	CMSS1	100	53.082	ENSMALG00000004250	cmss1	100	52.577	Monopterus_albus
ENSPTRG00000015157	CMSS1	99	82.449	MGP_CAROLIEiJ_G0020824	Cmss1	100	81.429	Mus_caroli
ENSPTRG00000015157	CMSS1	99	83.265	ENSMUSG00000022748	Cmss1	100	82.143	Mus_musculus
ENSPTRG00000015157	CMSS1	99	82.449	MGP_PahariEiJ_G0016524	Cmss1	100	80.714	Mus_pahari
ENSPTRG00000015157	CMSS1	99	82.857	MGP_SPRETEiJ_G0021724	Cmss1	100	81.429	Mus_spretus
ENSPTRG00000015157	CMSS1	99	93.443	ENSMPUG00000011324	CMSS1	100	91.538	Mustela_putorius_furo
ENSPTRG00000015157	CMSS1	100	91.498	ENSMLUG00000001131	CMSS1	99	90.769	Myotis_lucifugus
ENSPTRG00000015157	CMSS1	99	86.885	ENSNGAG00000020316	Cmss1	100	84.229	Nannospalax_galili
ENSPTRG00000015157	CMSS1	100	48.684	ENSNBRG00000003095	cmss1	100	50.172	Neolamprologus_brichardi
ENSPTRG00000015157	CMSS1	100	97.959	ENSNLEG00000034172	CMSS1	100	97.849	Nomascus_leucogenys
ENSPTRG00000015157	CMSS1	93	66.228	ENSMEUG00000014505	CMSS1	100	66.228	Notamacropus_eugenii
ENSPTRG00000015157	CMSS1	100	91.429	ENSOPRG00000002986	CMSS1	100	90.323	Ochotona_princeps
ENSPTRG00000015157	CMSS1	99	87.243	ENSODEG00000005226	-	100	84.946	Octodon_degus
ENSPTRG00000015157	CMSS1	100	70.251	ENSODEG00000009446	-	100	70.251	Octodon_degus
ENSPTRG00000015157	CMSS1	97	86.076	ENSODEG00000003558	-	100	80.783	Octodon_degus
ENSPTRG00000015157	CMSS1	99	76.132	ENSODEG00000001853	-	100	73.835	Octodon_degus
ENSPTRG00000015157	CMSS1	82	60.891	ENSONIG00000006678	cmss1	77	60.891	Oreochromis_niloticus
ENSPTRG00000015157	CMSS1	100	73.279	ENSOANG00000007529	CMSS1	100	73.820	Ornithorhynchus_anatinus
ENSPTRG00000015157	CMSS1	100	91.020	ENSOCUG00000025366	CMSS1	95	90.038	Oryctolagus_cuniculus
ENSPTRG00000015157	CMSS1	93	59.825	ENSORLG00000020340	cmss1	100	53.401	Oryzias_latipes
ENSPTRG00000015157	CMSS1	96	54.894	ENSORLG00020012235	cmss1	99	54.506	Oryzias_latipes_hni
ENSPTRG00000015157	CMSS1	82	56.931	ENSORLG00015015551	cmss1	75	56.931	Oryzias_latipes_hsok
ENSPTRG00000015157	CMSS1	100	53.448	ENSOMEG00000012555	cmss1	100	54.671	Oryzias_melastigma
ENSPTRG00000015157	CMSS1	93	91.667	ENSOGAG00000002045	CMSS1	100	91.667	Otolemur_garnettii
ENSPTRG00000015157	CMSS1	99	88.571	ENSOARG00000017899	CMSS1	89	87.984	Ovis_aries
ENSPTRG00000015157	CMSS1	100	99.184	ENSPPAG00000038515	CMSS1	100	98.921	Pan_paniscus
ENSPTRG00000015157	CMSS1	100	92.653	ENSPPRG00000016767	CMSS1	100	92.115	Panthera_pardus
ENSPTRG00000015157	CMSS1	100	93.061	ENSPTIG00000018274	CMSS1	100	92.473	Panthera_tigris_altaica
ENSPTRG00000015157	CMSS1	100	92.653	ENSPANG00000019980	CMSS1	100	92.086	Papio_anubis
ENSPTRG00000015157	CMSS1	92	60.870	ENSPKIG00000012609	cmss1	100	55.351	Paramormyrops_kingsleyae
ENSPTRG00000015157	CMSS1	93	72.489	ENSPSIG00000003849	CMSS1	100	72.489	Pelodiscus_sinensis
ENSPTRG00000015157	CMSS1	90	57.522	ENSPMGG00000010286	cmss1	87	61.084	Periophthalmus_magnuspinnatus
ENSPTRG00000015157	CMSS1	99	84.016	ENSPEMG00000016384	Cmss1	100	82.500	Peromyscus_maniculatus_bairdii
ENSPTRG00000015157	CMSS1	83	51.961	ENSPMAG00000001146	cmss1	99	52.475	Petromyzon_marinus
ENSPTRG00000015157	CMSS1	100	75.510	ENSPCIG00000015656	CMSS1	100	72.348	Phascolarctos_cinereus
ENSPTRG00000015157	CMSS1	100	52.098	ENSPFOG00000016849	cmss1	100	52.448	Poecilia_formosa
ENSPTRG00000015157	CMSS1	100	51.748	ENSPLAG00000008323	cmss1	100	52.098	Poecilia_latipinna
ENSPTRG00000015157	CMSS1	100	50.164	ENSPMEG00000021020	cmss1	100	53.103	Poecilia_mexicana
ENSPTRG00000015157	CMSS1	95	58.898	ENSPREG00000007618	cmss1	69	62.376	Poecilia_reticulata
ENSPTRG00000015157	CMSS1	100	97.143	ENSPPYG00000013606	CMSS1	100	96.057	Pongo_abelii
ENSPTRG00000015157	CMSS1	100	92.653	ENSPCOG00000020035	CMSS1	100	91.039	Propithecus_coquereli
ENSPTRG00000015157	CMSS1	100	78.367	ENSPVAG00000017031	CMSS1	100	77.419	Pteropus_vampyrus
ENSPTRG00000015157	CMSS1	91	48.921	ENSPNYG00000013428	cmss1	97	49.640	Pundamilia_nyererei
ENSPTRG00000015157	CMSS1	100	48.013	ENSPNAG00000007912	cmss1	100	48.675	Pygocentrus_nattereri
ENSPTRG00000015157	CMSS1	99	82.857	ENSRNOG00000027888	Cmss1	100	81.154	Rattus_norvegicus
ENSPTRG00000015157	CMSS1	100	95.918	ENSRBIG00000037931	CMSS1	100	95.402	Rhinopithecus_bieti
ENSPTRG00000015157	CMSS1	100	95.918	ENSRROG00000042910	CMSS1	100	95.402	Rhinopithecus_roxellana
ENSPTRG00000015157	CMSS1	100	94.694	ENSSBOG00000030980	CMSS1	100	93.893	Saimiri_boliviensis_boliviensis
ENSPTRG00000015157	CMSS1	100	74.699	ENSSHAG00000009321	CMSS1	99	74.206	Sarcophilus_harrisii
ENSPTRG00000015157	CMSS1	100	53.691	ENSSFOG00015001509	cmss1	100	55.102	Scleropages_formosus
ENSPTRG00000015157	CMSS1	100	51.203	ENSSMAG00000001653	cmss1	100	52.174	Scophthalmus_maximus
ENSPTRG00000015157	CMSS1	92	59.389	ENSSDUG00000007719	cmss1	100	53.608	Seriola_dumerili
ENSPTRG00000015157	CMSS1	84	63.285	ENSSLDG00000012300	cmss1	94	50.661	Seriola_lalandi_dorsalis
ENSPTRG00000015157	CMSS1	100	75.102	ENSSARG00000003584	CMSS1	100	74.643	Sorex_araneus
ENSPTRG00000015157	CMSS1	92	69.469	ENSSPUG00000003865	CMSS1	100	69.469	Sphenodon_punctatus
ENSPTRG00000015157	CMSS1	97	53.261	ENSSPAG00000019182	cmss1	82	55.431	Stegastes_partitus
ENSPTRG00000015157	CMSS1	100	92.653	ENSSSCG00000011970	CMSS1	100	91.756	Sus_scrofa
ENSPTRG00000015157	CMSS1	93	65.502	ENSTGUG00000013635	CMSS1	100	65.502	Taeniopygia_guttata
ENSPTRG00000015157	CMSS1	100	51.056	ENSTRUG00000015265	cmss1	100	51.761	Takifugu_rubripes
ENSPTRG00000015157	CMSS1	82	55.941	ENSTNIG00000002880	cmss1	88	51.029	Tetraodon_nigroviridis
ENSPTRG00000015157	CMSS1	93	67.544	ENSTBEG00000016722	CMSS1	100	59.643	Tupaia_belangeri
ENSPTRG00000015157	CMSS1	100	87.755	ENSTTRG00000001562	CMSS1	100	86.380	Tursiops_truncatus
ENSPTRG00000015157	CMSS1	99	91.803	ENSUAMG00000024209	CMSS1	100	93.722	Ursus_americanus
ENSPTRG00000015157	CMSS1	99	91.803	ENSUMAG00000001983	CMSS1	99	90.698	Ursus_maritimus
ENSPTRG00000015157	CMSS1	93	75.000	ENSVPAG00000000263	CMSS1	100	67.742	Vicugna_pacos
ENSPTRG00000015157	CMSS1	100	90.204	ENSVVUG00000021647	-	100	89.837	Vulpes_vulpes
ENSPTRG00000015157	CMSS1	88	92.593	ENSVVUG00000007776	-	85	92.593	Vulpes_vulpes
ENSPTRG00000015157	CMSS1	100	55.160	ENSXETG00000011858	cmss1	100	54.480	Xenopus_tropicalis
ENSPTRG00000015157	CMSS1	85	62.500	ENSXCOG00000018724	cmss1	69	62.871	Xiphophorus_couchianus
ENSPTRG00000015157	CMSS1	85	62.500	ENSXMAG00000011243	cmss1	76	62.871	Xiphophorus_maculatus