EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPTRG00000015377 (Gene tree)
Gene ID: 738526
Gene Symbol: MBD4
Alias: -
Full Name: methyl-CpG binding domain 4%2C DNA glycosylase
Gene Type: protein_coding
Species: Pan_troglodytes
Status: putative
Strand: Minus strand
Length: 8911 bases
Position: chr3:132701989-132710899
Accession: 2038
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTRP00000026489	MBD	PF01429.19	2.1e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTRT00000086897	-	789	-	ENSPTRP00000079153	262 (aa)	-	A0A2I3SQ64
ENSPTRT00000028703	-	2316	XM_009446395	ENSPTRP00000026489	580 (aa)	XP_009444670	H2QNC3

Gene Model

Click here to download ENSPTRG00000015377's gene model file

Pathways

Pathway ID	Pathway Name	Source
ptr03410	Base excision repair	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000015377's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTRG00000015377	MBD4	100	99.483	ENSG00000129071	MBD4	100	99.483	Homo_sapiens
ENSPTRG00000015377	MBD4	99	77.375	ENSAMEG00000004562	MBD4	99	77.375	Ailuropoda_melanoleuca
ENSPTRG00000015377	MBD4	85	41.980	ENSAOCG00000001157	mbd4	95	42.406	Amphiprion_ocellaris
ENSPTRG00000015377	MBD4	85	42.178	ENSAPEG00000016131	mbd4	95	42.604	Amphiprion_percula
ENSPTRG00000015377	MBD4	99	72.174	ENSBTAG00000021645	MBD4	100	72.174	Bos_taurus
ENSPTRG00000015377	MBD4	100	88.276	ENSCJAG00000017293	MBD4	100	88.276	Callithrix_jacchus
ENSPTRG00000015377	MBD4	99	76.603	ENSCAFG00000004867	MBD4	99	76.603	Canis_familiaris
ENSPTRG00000015377	MBD4	99	76.603	ENSCAFG00020007082	MBD4	99	76.603	Canis_lupus_dingo
ENSPTRG00000015377	MBD4	99	70.609	ENSCHIG00000009760	MBD4	100	70.609	Capra_hircus
ENSPTRG00000015377	MBD4	100	88.640	ENSCCAG00000029796	MBD4	100	88.640	Cebus_capucinus
ENSPTRG00000015377	MBD4	100	92.083	ENSCATG00000035211	MBD4	100	92.083	Cercocebus_atys
ENSPTRG00000015377	MBD4	98	70.053	ENSCLAG00000008974	MBD4	99	70.053	Chinchilla_lanigera
ENSPTRG00000015377	MBD4	100	91.738	ENSCSAG00000009037	MBD4	100	91.738	Chlorocebus_sabaeus
ENSPTRG00000015377	MBD4	87	49.808	ENSCPBG00000014704	MBD4	89	49.808	Chrysemys_picta_bellii
ENSPTRG00000015377	MBD4	100	92.427	ENSCANG00000007120	MBD4	100	92.427	Colobus_angolensis_palliatus
ENSPTRG00000015377	MBD4	99	66.957	ENSCGRG00001003507	Mbd4	100	66.783	Cricetulus_griseus_chok1gshd
ENSPTRG00000015377	MBD4	99	66.957	ENSCGRG00000010974	Mbd4	100	66.783	Cricetulus_griseus_crigri
ENSPTRG00000015377	MBD4	99	76.174	ENSDNOG00000049619	MBD4	100	76.174	Dasypus_novemcinctus
ENSPTRG00000015377	MBD4	81	63.753	ENSDORG00000000902	-	97	63.180	Dipodomys_ordii
ENSPTRG00000015377	MBD4	99	79.652	ENSEASG00005014800	MBD4	100	79.652	Equus_asinus_asinus
ENSPTRG00000015377	MBD4	99	79.826	ENSECAG00000022106	MBD4	100	79.826	Equus_caballus
ENSPTRG00000015377	MBD4	95	61.343	ENSEEUG00000011459	MBD4	99	61.343	Erinaceus_europaeus
ENSPTRG00000015377	MBD4	99	78.756	ENSFCAG00000000083	MBD4	99	78.756	Felis_catus
ENSPTRG00000015377	MBD4	82	44.581	ENSFALG00000013663	MBD4	99	44.643	Ficedula_albicollis
ENSPTRG00000015377	MBD4	87	50.672	ENSGAGG00000018644	MBD4	89	50.577	Gopherus_agassizii
ENSPTRG00000015377	MBD4	100	98.103	ENSGGOG00000010698	MBD4	100	98.103	Gorilla_gorilla
ENSPTRG00000015377	MBD4	98	72.855	ENSHGLG00000009034	MBD4	99	72.855	Heterocephalus_glaber_female
ENSPTRG00000015377	MBD4	98	72.855	ENSHGLG00100000135	MBD4	99	72.855	Heterocephalus_glaber_male
ENSPTRG00000015377	MBD4	99	72.917	ENSSTOG00000020663	MBD4	100	72.917	Ictidomys_tridecemlineatus
ENSPTRG00000015377	MBD4	99	74.913	ENSLAFG00000010609	MBD4	99	74.913	Loxodonta_africana
ENSPTRG00000015377	MBD4	100	91.910	ENSMFAG00000002266	MBD4	100	91.910	Macaca_fascicularis
ENSPTRG00000015377	MBD4	100	91.938	ENSMMUG00000012723	MBD4	100	91.938	Macaca_mulatta
ENSPTRG00000015377	MBD4	96	91.771	ENSMNEG00000029752	MBD4	99	91.771	Macaca_nemestrina
ENSPTRG00000015377	MBD4	100	91.910	ENSMLEG00000024859	MBD4	100	91.910	Mandrillus_leucophaeus
ENSPTRG00000015377	MBD4	100	81.552	ENSMICG00000008022	MBD4	100	81.552	Microcebus_murinus
ENSPTRG00000015377	MBD4	68	47.727	ENSMOCG00000002466	-	97	47.727	Microtus_ochrogaster
ENSPTRG00000015377	MBD4	86	59.681	ENSMODG00000006399	-	99	59.281	Monodelphis_domestica
ENSPTRG00000015377	MBD4	85	42.570	ENSMALG00000021517	mbd4	87	42.570	Monopterus_albus
ENSPTRG00000015377	MBD4	99	66.435	MGP_CAROLIEiJ_G0028760	Mbd4	100	66.435	Mus_caroli
ENSPTRG00000015377	MBD4	99	65.739	ENSMUSG00000030322	Mbd4	100	65.739	Mus_musculus
ENSPTRG00000015377	MBD4	99	67.188	MGP_PahariEiJ_G0022511	-	100	67.188	Mus_pahari
ENSPTRG00000015377	MBD4	99	65.565	MGP_SPRETEiJ_G0029788	Mbd4	100	65.565	Mus_spretus
ENSPTRG00000015377	MBD4	99	75.563	ENSMPUG00000017195	MBD4	99	75.563	Mustela_putorius_furo
ENSPTRG00000015377	MBD4	93	80.074	ENSMLUG00000014766	MBD4	99	79.450	Myotis_lucifugus
ENSPTRG00000015377	MBD4	100	96.724	ENSNLEG00000005337	MBD4	100	96.724	Nomascus_leucogenys
ENSPTRG00000015377	MBD4	50	100.000	ENSMEUG00000015599	-	77	100.000	Notamacropus_eugenii
ENSPTRG00000015377	MBD4	99	65.345	ENSOPRG00000000473	MBD4	99	65.345	Ochotona_princeps
ENSPTRG00000015377	MBD4	85	40.977	ENSONIG00000017212	mbd4	62	69.903	Oreochromis_niloticus
ENSPTRG00000015377	MBD4	74	44.138	ENSOANG00000004589	-	96	44.138	Ornithorhynchus_anatinus
ENSPTRG00000015377	MBD4	99	68.782	ENSOCUG00000013006	MBD4	100	68.782	Oryctolagus_cuniculus
ENSPTRG00000015377	MBD4	99	76.910	ENSOGAG00000010236	MBD4	100	76.910	Otolemur_garnettii
ENSPTRG00000015377	MBD4	99	70.957	ENSOARG00000014699	MBD4	100	70.957	Ovis_aries
ENSPTRG00000015377	MBD4	100	98.793	ENSPPAG00000036528	MBD4	100	98.793	Pan_paniscus
ENSPTRG00000015377	MBD4	99	77.547	ENSPPRG00000016480	MBD4	99	77.547	Panthera_pardus
ENSPTRG00000015377	MBD4	100	92.943	ENSPANG00000015047	MBD4	100	92.943	Papio_anubis
ENSPTRG00000015377	MBD4	88	49.813	ENSPSIG00000007892	MBD4	90	49.813	Pelodiscus_sinensis
ENSPTRG00000015377	MBD4	90	61.333	ENSPEMG00000006226	Mbd4	97	61.333	Peromyscus_maniculatus_bairdii
ENSPTRG00000015377	MBD4	92	58.118	ENSPCIG00000002276	-	100	57.749	Phascolarctos_cinereus
ENSPTRG00000015377	MBD4	100	95.869	ENSPPYG00000013417	MBD4	100	95.869	Pongo_abelii
ENSPTRG00000015377	MBD4	95	70.758	ENSPCAG00000012915	MBD4	99	70.758	Procavia_capensis
ENSPTRG00000015377	MBD4	99	79.102	ENSPVAG00000005238	MBD4	99	79.102	Pteropus_vampyrus
ENSPTRG00000015377	MBD4	99	66.090	ENSRNOG00000010919	Mbd4	100	66.090	Rattus_norvegicus
ENSPTRG00000015377	MBD4	100	92.771	ENSRBIG00000027722	MBD4	100	92.771	Rhinopithecus_bieti
ENSPTRG00000015377	MBD4	100	92.599	ENSRROG00000029136	MBD4	100	92.599	Rhinopithecus_roxellana
ENSPTRG00000015377	MBD4	99	89.100	ENSSBOG00000016810	MBD4	100	88.581	Saimiri_boliviensis_boliviensis
ENSPTRG00000015377	MBD4	93	56.377	ENSSHAG00000012953	MBD4	94	56.377	Sarcophilus_harrisii
ENSPTRG00000015377	MBD4	85	42.376	ENSSFOG00015016292	mbd4	95	42.376	Scleropages_formosus
ENSPTRG00000015377	MBD4	81	61.538	ENSSARG00000004496	-	80	61.538	Sorex_araneus
ENSPTRG00000015377	MBD4	86	49.615	ENSSPUG00000017344	MBD4	91	49.615	Sphenodon_punctatus
ENSPTRG00000015377	MBD4	99	76.042	ENSSSCG00000033303	MBD4	100	76.042	Sus_scrofa
ENSPTRG00000015377	MBD4	85	38.235	ENSTNIG00000017927	mbd4	55	67.978	Tetraodon_nigroviridis
ENSPTRG00000015377	MBD4	88	60.550	ENSTBEG00000003041	-	88	60.550	Tupaia_belangeri
ENSPTRG00000015377	MBD4	94	77.960	ENSTTRG00000011265	MBD4	98	77.960	Tursiops_truncatus
ENSPTRG00000015377	MBD4	86	80.240	ENSUAMG00000000814	MBD4	99	80.240	Ursus_americanus
ENSPTRG00000015377	MBD4	99	78.435	ENSUMAG00000017542	MBD4	100	78.435	Ursus_maritimus
ENSPTRG00000015377	MBD4	64	75.229	ENSVPAG00000004040	-	68	75.229	Vicugna_pacos
ENSPTRG00000015377	MBD4	99	76.125	ENSVVUG00000014222	MBD4	99	76.125	Vulpes_vulpes