EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPTRG00000015570 (Gene tree)
Gene ID: 460812
Gene Symbol: GFM1
Alias: -
Full Name: G elongation factor mitochondrial 1
Gene Type: protein_coding
Species: Pan_troglodytes
Status: putative
Strand: Plus strand
Length: 48239 bases
Position: chr3:162241956-162290194
Accession: 13003
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTRP00000091665	GTP_EFTU	PF00009.27	2e-63	1	1
ENSPTRP00000082987	GTP_EFTU	PF00009.27	2.1e-63	1	1
ENSPTRP00000050977	GTP_EFTU	PF00009.27	3.2e-63	1	1
ENSPTRP00000084091	GTP_EFTU	PF00009.27	3.8e-56	1	1
ENSPTRP00000091665	GTP_EFTU_D2	PF03144.25	2.7e-16	1	1
ENSPTRP00000082987	GTP_EFTU_D2	PF03144.25	2.8e-16	1	1
ENSPTRP00000050977	GTP_EFTU_D2	PF03144.25	2.9e-16	1	1
ENSPTRP00000091665	EFG_IV	PF03764.18	1.2e-34	1	1
ENSPTRP00000082987	EFG_IV	PF03764.18	1.2e-34	1	1
ENSPTRP00000050977	EFG_IV	PF03764.18	1.3e-34	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTRT00000103866	-	3195	-	ENSPTRP00000082987	751 (aa)	-	A0A2I3T1A0
ENSPTRT00000081431	-	2244	-	ENSPTRP00000091665	747 (aa)	-	A0A2I3TRR9
ENSPTRT00000051055	-	3755	XM_016939969	ENSPTRP00000050977	770 (aa)	XP_016795458	H2R7Y8
ENSPTRT00000104386	-	744	-	ENSPTRP00000084091	247 (aa)	-	A0A2I3T4D7

Gene Model

Click here to download ENSPTRG00000015570's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000015570's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPTRG00000015570	GFM1	61	30.986	ENSPTRG00000009287	EFTUD2	54	30.986
ENSPTRG00000015570	GFM1	84	46.512	ENSPTRG00000016989	GFM2	91	34.789
ENSPTRG00000015570	GFM1	81	34.579	ENSPTRG00000016022	GUF1	63	37.908
ENSPTRG00000015570	GFM1	74	38.926	ENSPTRG00000010288	EEF2	87	40.909

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTRG00000015570	GFM1	100	99.740	ENSG00000168827	GFM1	100	100.000	Homo_sapiens
ENSPTRG00000015570	GFM1	93	77.603	ENSAPOG00000016489	gfm1	97	78.686	Acanthochromis_polyacanthus
ENSPTRG00000015570	GFM1	98	92.663	ENSAMEG00000013542	GFM1	98	92.663	Ailuropoda_melanoleuca
ENSPTRG00000015570	GFM1	98	75.068	ENSACIG00000014465	gfm1	94	76.033	Amphilophus_citrinellus
ENSPTRG00000015570	GFM1	99	78.418	ENSAOCG00000006023	gfm1	97	79.452	Amphiprion_ocellaris
ENSPTRG00000015570	GFM1	99	78.418	ENSAPEG00000024499	gfm1	99	80.056	Amphiprion_percula
ENSPTRG00000015570	GFM1	100	78.562	ENSATEG00000013789	gfm1	98	79.456	Anabas_testudineus
ENSPTRG00000015570	GFM1	97	83.333	ENSAPLG00000005022	GFM1	100	83.333	Anas_platyrhynchos
ENSPTRG00000015570	GFM1	97	81.326	ENSACAG00000006829	GFM1	99	81.326	Anolis_carolinensis
ENSPTRG00000015570	GFM1	100	94.674	ENSANAG00000035983	GFM1	98	94.966	Aotus_nancymaae
ENSPTRG00000015570	GFM1	100	79.361	ENSACLG00000016586	gfm1	99	80.357	Astatotilapia_calliptera
ENSPTRG00000015570	GFM1	100	78.562	ENSAMXG00000013435	gfm1	96	81.111	Astyanax_mexicanus
ENSPTRG00000015570	GFM1	100	92.440	ENSBTAG00000027795	GFM1	98	92.935	Bos_taurus
ENSPTRG00000015570	GFM1	97	55.601	WBGene00009246	gfm-1	99	55.526	Caenorhabditis_elegans
ENSPTRG00000015570	GFM1	100	94.807	ENSCJAG00000000363	GFM1	98	95.109	Callithrix_jacchus
ENSPTRG00000015570	GFM1	99	92.183	ENSCAFG00000009006	GFM1	100	93.491	Canis_familiaris
ENSPTRG00000015570	GFM1	98	92.935	ENSCAFG00020005878	GFM1	99	93.499	Canis_lupus_dingo
ENSPTRG00000015570	GFM1	100	92.706	ENSCHIG00000015220	GFM1	98	93.207	Capra_hircus
ENSPTRG00000015570	GFM1	100	94.024	ENSTSYG00000002013	GFM1	98	94.701	Carlito_syrichta
ENSPTRG00000015570	GFM1	97	81.044	ENSCAPG00000005699	GFM1	98	81.018	Cavia_aperea
ENSPTRG00000015570	GFM1	100	91.645	ENSCPOG00000001194	GFM1	98	92.663	Cavia_porcellus
ENSPTRG00000015570	GFM1	100	94.674	ENSCCAG00000025561	GFM1	98	94.959	Cebus_capucinus
ENSPTRG00000015570	GFM1	98	100.000	ENSCATG00000037622	GFM1	100	97.204	Cercocebus_atys
ENSPTRG00000015570	GFM1	98	91.588	ENSCLAG00000002503	GFM1	98	91.588	Chinchilla_lanigera
ENSPTRG00000015570	GFM1	100	96.937	ENSCSAG00000012162	GFM1	100	96.937	Chlorocebus_sabaeus
ENSPTRG00000015570	GFM1	100	83.422	ENSCHOG00000004867	GFM1	98	83.967	Choloepus_hoffmanni
ENSPTRG00000015570	GFM1	100	81.782	ENSCPBG00000018367	GFM1	98	82.609	Chrysemys_picta_bellii
ENSPTRG00000015570	GFM1	95	59.254	ENSCING00000011960	-	94	59.254	Ciona_intestinalis
ENSPTRG00000015570	GFM1	95	59.778	ENSCSAVG00000008514	-	99	59.778	Ciona_savignyi
ENSPTRG00000015570	GFM1	100	97.976	ENSCANG00000031714	GFM1	100	97.976	Colobus_angolensis_palliatus
ENSPTRG00000015570	GFM1	100	92.175	ENSCGRG00001022095	GFM1	98	93.071	Cricetulus_griseus_chok1gshd
ENSPTRG00000015570	GFM1	100	92.175	ENSCGRG00000012043	GFM1	98	93.071	Cricetulus_griseus_crigri
ENSPTRG00000015570	GFM1	96	76.217	ENSCSEG00000017088	gfm1	98	76.217	Cynoglossus_semilaevis
ENSPTRG00000015570	GFM1	99	80.697	ENSCVAG00000004126	gfm1	99	81.268	Cyprinodon_variegatus
ENSPTRG00000015570	GFM1	100	78.029	ENSDARG00000063624	gfm1	97	80.000	Danio_rerio
ENSPTRG00000015570	GFM1	54	89.976	ENSDNOG00000016385	-	100	89.976	Dasypus_novemcinctus
ENSPTRG00000015570	GFM1	100	89.523	ENSDORG00000014165	Gfm1	98	89.946	Dipodomys_ordii
ENSPTRG00000015570	GFM1	95	67.465	FBgn0263133	mEFG1	95	67.465	Drosophila_melanogaster
ENSPTRG00000015570	GFM1	89	91.549	ENSETEG00000019197	GFM1	90	91.549	Echinops_telfairi
ENSPTRG00000015570	GFM1	90	66.074	ENSEBUG00000012794	gfm1	99	66.074	Eptatretus_burgeri
ENSPTRG00000015570	GFM1	96	68.552	ENSEEUG00000000429	GFM1	99	68.552	Erinaceus_europaeus
ENSPTRG00000015570	GFM1	100	76.565	ENSELUG00000014728	gfm1	98	77.446	Esox_lucius
ENSPTRG00000015570	GFM1	98	93.478	ENSFCAG00000013291	GFM1	98	93.478	Felis_catus
ENSPTRG00000015570	GFM1	90	83.432	ENSFALG00000007619	GFM1	100	83.432	Ficedula_albicollis
ENSPTRG00000015570	GFM1	100	91.379	ENSFDAG00000016559	GFM1	98	92.391	Fukomys_damarensis
ENSPTRG00000015570	GFM1	100	78.961	ENSFHEG00000006091	gfm1	98	80.136	Fundulus_heteroclitus
ENSPTRG00000015570	GFM1	96	78.838	ENSGMOG00000010161	gfm1	99	78.838	Gadus_morhua
ENSPTRG00000015570	GFM1	98	82.128	ENSGALG00000009634	GFM1	99	82.128	Gallus_gallus
ENSPTRG00000015570	GFM1	100	80.027	ENSGAFG00000012527	gfm1	98	81.224	Gambusia_affinis
ENSPTRG00000015570	GFM1	99	77.321	ENSGACG00000009864	gfm1	97	79.172	Gasterosteus_aculeatus
ENSPTRG00000015570	GFM1	99	79.508	ENSGAGG00000002769	-	91	90.955	Gopherus_agassizii
ENSPTRG00000015570	GFM1	100	100.000	ENSGGOG00000003085	GFM1	100	100.000	Gorilla_gorilla
ENSPTRG00000015570	GFM1	100	79.494	ENSHBUG00000002120	gfm1	97	81.543	Haplochromis_burtoni
ENSPTRG00000015570	GFM1	100	92.042	ENSHGLG00000016855	GFM1	98	93.071	Heterocephalus_glaber_female
ENSPTRG00000015570	GFM1	100	92.042	ENSHGLG00100013049	GFM1	98	93.071	Heterocephalus_glaber_male
ENSPTRG00000015570	GFM1	99	79.223	ENSHCOG00000007638	gfm1	98	80.274	Hippocampus_comes
ENSPTRG00000015570	GFM1	100	78.562	ENSIPUG00000005873	gfm1	97	80.441	Ictalurus_punctatus
ENSPTRG00000015570	GFM1	98	91.304	ENSSTOG00000010150	GFM1	99	91.304	Ictidomys_tridecemlineatus
ENSPTRG00000015570	GFM1	100	90.584	ENSJJAG00000016447	Gfm1	98	91.440	Jaculus_jaculus
ENSPTRG00000015570	GFM1	100	76.964	ENSKMAG00000020768	gfm1	98	78.095	Kryptolebias_marmoratus
ENSPTRG00000015570	GFM1	93	80.199	ENSLBEG00000021315	gfm1	100	80.199	Labrus_bergylta
ENSPTRG00000015570	GFM1	100	79.494	ENSLACG00000012295	GFM1	99	80.548	Latimeria_chalumnae
ENSPTRG00000015570	GFM1	97	75.309	ENSLOCG00000003778	gfm1	99	75.309	Lepisosteus_oculatus
ENSPTRG00000015570	GFM1	99	89.376	ENSLAFG00000010945	GFM1	100	89.931	Loxodonta_africana
ENSPTRG00000015570	GFM1	100	97.571	ENSMFAG00000035731	GFM1	100	97.571	Macaca_fascicularis
ENSPTRG00000015570	GFM1	98	100.000	ENSMMUG00000004961	GFM1	98	100.000	Macaca_mulatta
ENSPTRG00000015570	GFM1	100	98.381	ENSMNEG00000033245	GFM1	100	98.381	Macaca_nemestrina
ENSPTRG00000015570	GFM1	97	97.365	ENSMLEG00000030908	GFM1	100	97.308	Mandrillus_leucophaeus
ENSPTRG00000015570	GFM1	100	79.361	ENSMAMG00000011760	gfm1	98	80.408	Mastacembelus_armatus
ENSPTRG00000015570	GFM1	100	79.494	ENSMZEG00005016639	gfm1	97	81.543	Maylandia_zebra
ENSPTRG00000015570	GFM1	97	82.345	ENSMGAG00000010641	GFM1	97	82.345	Meleagris_gallopavo
ENSPTRG00000015570	GFM1	100	92.440	ENSMAUG00000000611	Gfm1	98	93.478	Mesocricetus_auratus
ENSPTRG00000015570	GFM1	98	94.293	ENSMICG00000049086	GFM1	98	94.293	Microcebus_murinus
ENSPTRG00000015570	GFM1	100	91.777	ENSMOCG00000000465	Gfm1	98	92.527	Microtus_ochrogaster
ENSPTRG00000015570	GFM1	99	79.111	ENSMMOG00000012538	gfm1	98	79.863	Mola_mola
ENSPTRG00000015570	GFM1	98	86.179	ENSMODG00000015673	GFM1	98	86.915	Monodelphis_domestica
ENSPTRG00000015570	GFM1	99	78.600	ENSMALG00000012508	gfm1	95	80.501	Monopterus_albus
ENSPTRG00000015570	GFM1	100	90.584	MGP_CAROLIEiJ_G0025052	Gfm1	98	91.304	Mus_caroli
ENSPTRG00000015570	GFM1	100	90.849	ENSMUSG00000027774	Gfm1	98	91.576	Mus_musculus
ENSPTRG00000015570	GFM1	100	90.849	MGP_PahariEiJ_G0026495	Gfm1	98	91.576	Mus_pahari
ENSPTRG00000015570	GFM1	100	90.849	MGP_SPRETEiJ_G0025994	Gfm1	98	91.576	Mus_spretus
ENSPTRG00000015570	GFM1	100	92.042	ENSMPUG00000002859	GFM1	98	92.663	Mustela_putorius_furo
ENSPTRG00000015570	GFM1	100	92.971	ENSMLUG00000000452	GFM1	98	93.750	Myotis_lucifugus
ENSPTRG00000015570	GFM1	100	91.102	ENSNGAG00000012375	Gfm1	98	92.098	Nannospalax_galili
ENSPTRG00000015570	GFM1	97	81.655	ENSNBRG00000004631	gfm1	99	81.655	Neolamprologus_brichardi
ENSPTRG00000015570	GFM1	100	99.190	ENSNLEG00000004176	GFM1	100	99.190	Nomascus_leucogenys
ENSPTRG00000015570	GFM1	91	78.394	ENSMEUG00000007784	GFM1	100	78.394	Notamacropus_eugenii
ENSPTRG00000015570	GFM1	100	90.280	ENSOPRG00000009860	GFM1	99	91.168	Ochotona_princeps
ENSPTRG00000015570	GFM1	98	93.342	ENSODEG00000004316	GFM1	98	93.342	Octodon_degus
ENSPTRG00000015570	GFM1	100	79.627	ENSONIG00000003772	gfm1	97	81.543	Oreochromis_niloticus
ENSPTRG00000015570	GFM1	65	92.500	ENSOANG00000013873	-	88	92.547	Ornithorhynchus_anatinus
ENSPTRG00000015570	GFM1	98	93.750	ENSOCUG00000013561	GFM1	98	93.750	Oryctolagus_cuniculus
ENSPTRG00000015570	GFM1	94	81.805	ENSORLG00000006487	gfm1	100	81.805	Oryzias_latipes
ENSPTRG00000015570	GFM1	97	81.129	ENSORLG00020003362	gfm1	97	81.129	Oryzias_latipes_hni
ENSPTRG00000015570	GFM1	97	80.716	ENSORLG00015005829	gfm1	97	80.716	Oryzias_latipes_hsok
ENSPTRG00000015570	GFM1	100	79.627	ENSOMEG00000012894	gfm1	97	81.543	Oryzias_melastigma
ENSPTRG00000015570	GFM1	100	92.042	ENSOGAG00000008298	GFM1	98	92.663	Otolemur_garnettii
ENSPTRG00000015570	GFM1	97	92.720	ENSOARG00000002409	GFM1	100	92.720	Ovis_aries
ENSPTRG00000015570	GFM1	100	100.000	ENSPPAG00000033881	GFM1	100	100.000	Pan_paniscus
ENSPTRG00000015570	GFM1	98	93.342	ENSPPRG00000009281	GFM1	98	93.342	Panthera_pardus
ENSPTRG00000015570	GFM1	98	93.207	ENSPTIG00000012416	GFM1	98	93.207	Panthera_tigris_altaica
ENSPTRG00000015570	GFM1	100	98.381	ENSPANG00000016512	GFM1	100	98.381	Papio_anubis
ENSPTRG00000015570	GFM1	97	81.129	ENSPKIG00000004876	gfm1	97	81.129	Paramormyrops_kingsleyae
ENSPTRG00000015570	GFM1	99	83.288	ENSPSIG00000012567	GFM1	99	82.930	Pelodiscus_sinensis
ENSPTRG00000015570	GFM1	96	79.889	ENSPMGG00000014068	gfm1	99	79.889	Periophthalmus_magnuspinnatus
ENSPTRG00000015570	GFM1	100	91.777	ENSPEMG00000008942	Gfm1	98	92.527	Peromyscus_maniculatus_bairdii
ENSPTRG00000015570	GFM1	98	73.571	ENSPCIG00000020195	GFM1	96	86.829	Phascolarctos_cinereus
ENSPTRG00000015570	GFM1	100	80.160	ENSPFOG00000011022	gfm1	98	81.361	Poecilia_formosa
ENSPTRG00000015570	GFM1	97	81.931	ENSPLAG00000019585	gfm1	98	80.401	Poecilia_latipinna
ENSPTRG00000015570	GFM1	100	80.027	ENSPMEG00000012376	gfm1	98	81.224	Poecilia_mexicana
ENSPTRG00000015570	GFM1	100	79.760	ENSPREG00000001332	gfm1	93	80.952	Poecilia_reticulata
ENSPTRG00000015570	GFM1	100	98.668	ENSPPYG00000014244	GFM1	100	98.668	Pongo_abelii
ENSPTRG00000015570	GFM1	94	87.624	ENSPCAG00000008934	GFM1	100	87.624	Procavia_capensis
ENSPTRG00000015570	GFM1	98	94.701	ENSPCOG00000022259	GFM1	98	94.701	Propithecus_coquereli
ENSPTRG00000015570	GFM1	100	92.971	ENSPVAG00000013605	GFM1	98	93.478	Pteropus_vampyrus
ENSPTRG00000015570	GFM1	100	79.494	ENSPNYG00000006037	gfm1	100	80.379	Pundamilia_nyererei
ENSPTRG00000015570	GFM1	100	78.961	ENSPNAG00000001237	gfm1	97	80.833	Pygocentrus_nattereri
ENSPTRG00000015570	GFM1	100	90.716	ENSRNOG00000012873	Gfm1	98	91.712	Rattus_norvegicus
ENSPTRG00000015570	GFM1	100	97.571	ENSRBIG00000031363	GFM1	100	97.571	Rhinopithecus_bieti
ENSPTRG00000015570	GFM1	100	97.571	ENSRROG00000031081	GFM1	100	97.571	Rhinopithecus_roxellana
ENSPTRG00000015570	GFM1	92	57.184	YLR069C	-	90	57.184	Saccharomyces_cerevisiae
ENSPTRG00000015570	GFM1	100	95.951	ENSSBOG00000023252	GFM1	98	95.380	Saimiri_boliviensis_boliviensis
ENSPTRG00000015570	GFM1	99	86.364	ENSSHAG00000017772	GFM1	98	87.228	Sarcophilus_harrisii
ENSPTRG00000015570	GFM1	100	78.989	ENSSFOG00015003117	gfm1	99	80.907	Scleropages_formosus
ENSPTRG00000015570	GFM1	100	76.698	ENSSMAG00000013221	gfm1	98	77.687	Scophthalmus_maximus
ENSPTRG00000015570	GFM1	100	77.896	ENSSDUG00000018665	gfm1	98	79.048	Seriola_dumerili
ENSPTRG00000015570	GFM1	100	77.896	ENSSLDG00000020606	gfm1	98	79.048	Seriola_lalandi_dorsalis
ENSPTRG00000015570	GFM1	97	80.495	ENSSPUG00000018686	GFM1	98	80.495	Sphenodon_punctatus
ENSPTRG00000015570	GFM1	100	78.296	ENSSPAG00000008800	gfm1	98	79.320	Stegastes_partitus
ENSPTRG00000015570	GFM1	100	91.921	ENSSSCG00000025651	GFM1	97	92.527	Sus_scrofa
ENSPTRG00000015570	GFM1	97	80.028	ENSTRUG00000009244	gfm1	97	80.028	Takifugu_rubripes
ENSPTRG00000015570	GFM1	97	80.854	ENSTNIG00000007729	gfm1	97	80.854	Tetraodon_nigroviridis
ENSPTRG00000015570	GFM1	81	97.368	ENSTBEG00000017404	GFM1	82	97.368	Tupaia_belangeri
ENSPTRG00000015570	GFM1	100	91.029	ENSTTRG00000001735	GFM1	97	92.663	Tursiops_truncatus
ENSPTRG00000015570	GFM1	98	92.935	ENSUAMG00000026381	GFM1	98	92.935	Ursus_americanus
ENSPTRG00000015570	GFM1	98	92.799	ENSUMAG00000011268	GFM1	98	92.799	Ursus_maritimus
ENSPTRG00000015570	GFM1	100	88.859	ENSVPAG00000009444	GFM1	98	89.266	Vicugna_pacos
ENSPTRG00000015570	GFM1	99	91.165	ENSVVUG00000020091	GFM1	100	93.047	Vulpes_vulpes
ENSPTRG00000015570	GFM1	100	82.205	ENSXETG00000032551	GFM1	97	83.858	Xenopus_tropicalis
ENSPTRG00000015570	GFM1	85	86.730	ENSXCOG00000012590	gfm1	88	86.730	Xiphophorus_couchianus
ENSPTRG00000015570	GFM1	100	79.760	ENSXMAG00000000261	gfm1	98	80.952	Xiphophorus_maculatus