EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPTRG00000016060 (Gene tree)
Gene ID: 107974320
Gene Symbol: FIP1L1
Alias: -
Full Name: factor interacting with PAPOLA and CPSF1
Gene Type: protein_coding
Species: Pan_troglodytes
Status: putative
Strand: Minus strand
Length: 82942 bases
Position: chr4:77248222-77331163
Accession: 603
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTRP00000071865	Fip1	PF05182.13	1.3e-24	1	1
ENSPTRP00000093648	Fip1	PF05182.13	1.5e-24	1	1
ENSPTRP00000076751	Fip1	PF05182.13	1.5e-24	1	1
ENSPTRP00000027624	Fip1	PF05182.13	1.6e-24	1	1
ENSPTRP00000090492	Fip1	PF05182.13	1.6e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTRT00000029934	-	2195	XM_016951730	ENSPTRP00000027624	594 (aa)	XP_016807219	H2QPG9
ENSPTRT00000107422	-	1980	XM_016951739	ENSPTRP00000071865	520 (aa)	XP_016807228	A0A2I3S4B7
ENSPTRT00000108999	-	2184	XM_016951731	ENSPTRP00000076751	588 (aa)	XP_016807220	A0A2I3SI79
ENSPTRT00000093231	-	1749	-	ENSPTRP00000093648	582 (aa)	-	A0A2I3SM07
ENSPTRT00000083846	-	2662	XM_016951729	ENSPTRP00000090492	603 (aa)	XP_016807218	K7CRR8

Gene Model

Click here to download ENSPTRG00000016060's gene model file

Pathways

Pathway ID	Pathway Name	Source
ptr03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000016060's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPTRG00000016060	FIP1L1	100	100.000	ENSPTRG00000050184	-	100	100.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTRG00000016060	FIP1L1	100	100.000	ENSG00000145216	FIP1L1	100	100.000	Homo_sapiens
ENSPTRG00000016060	FIP1L1	100	100.000	ENSANAG00000032461	FIP1L1	100	100.000	Aotus_nancymaae
ENSPTRG00000016060	FIP1L1	100	100.000	ENSCJAG00000018490	FIP1L1	100	100.000	Callithrix_jacchus
ENSPTRG00000016060	FIP1L1	100	99.337	ENSCAFG00020001745	FIP1L1	100	99.337	Canis_lupus_dingo
ENSPTRG00000016060	FIP1L1	100	97.500	ENSTSYG00000002808	FIP1L1	100	97.500	Carlito_syrichta
ENSPTRG00000016060	FIP1L1	100	99.834	ENSCSAG00000004975	FIP1L1	100	99.834	Chlorocebus_sabaeus
ENSPTRG00000016060	FIP1L1	100	100.000	ENSCANG00000004785	FIP1L1	100	100.000	Colobus_angolensis_palliatus
ENSPTRG00000016060	FIP1L1	100	92.523	ENSDORG00000005629	-	100	92.523	Dipodomys_ordii
ENSPTRG00000016060	FIP1L1	100	99.668	ENSECAG00000019415	FIP1L1	100	99.668	Equus_caballus
ENSPTRG00000016060	FIP1L1	100	100.000	ENSGGOG00000006427	FIP1L1	100	100.000	Gorilla_gorilla
ENSPTRG00000016060	FIP1L1	100	98.822	ENSLAFG00000002605	FIP1L1	100	98.822	Loxodonta_africana
ENSPTRG00000016060	FIP1L1	100	100.000	ENSMFAG00000034699	FIP1L1	100	100.000	Macaca_fascicularis
ENSPTRG00000016060	FIP1L1	100	100.000	ENSMNEG00000026332	FIP1L1	100	100.000	Macaca_nemestrina
ENSPTRG00000016060	FIP1L1	100	100.000	ENSMLEG00000041763	FIP1L1	100	100.000	Mandrillus_leucophaeus
ENSPTRG00000016060	FIP1L1	100	93.077	ENSMICG00000008149	FIP1L1	100	93.077	Microcebus_murinus
ENSPTRG00000016060	FIP1L1	100	100.000	ENSNLEG00000008187	FIP1L1	100	100.000	Nomascus_leucogenys
ENSPTRG00000016060	FIP1L1	100	97.678	ENSOCUG00000000100	FIP1L1	100	97.678	Oryctolagus_cuniculus
ENSPTRG00000016060	FIP1L1	100	98.824	ENSOGAG00000009545	FIP1L1	100	98.824	Otolemur_garnettii
ENSPTRG00000016060	FIP1L1	100	99.327	ENSPPRG00000002221	FIP1L1	100	99.327	Panthera_pardus
ENSPTRG00000016060	FIP1L1	95	99.292	ENSPTIG00000010757	FIP1L1	95	99.292	Panthera_tigris_altaica
ENSPTRG00000016060	FIP1L1	100	100.000	ENSPANG00000011213	FIP1L1	100	100.000	Papio_anubis
ENSPTRG00000016060	FIP1L1	100	99.834	ENSPPYG00000014773	FIP1L1	100	99.834	Pongo_abelii
ENSPTRG00000016060	FIP1L1	88	99.289	ENSPCOG00000021280	FIP1L1	82	99.289	Propithecus_coquereli
ENSPTRG00000016060	FIP1L1	100	100.000	ENSRBIG00000042397	FIP1L1	100	100.000	Rhinopithecus_bieti
ENSPTRG00000016060	FIP1L1	100	99.660	ENSSSCG00000031636	FIP1L1	100	99.660	Sus_scrofa
ENSPTRG00000016060	FIP1L1	93	96.909	ENSTTRG00000015793	FIP1L1	100	96.909	Tursiops_truncatus
ENSPTRG00000016060	FIP1L1	84	99.409	ENSUAMG00000010607	FIP1L1	98	99.409	Ursus_americanus