EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPTRG00000016105 (Gene tree)
Gene ID: 461291
Gene Symbol: YTHDC1
Alias: -
Full Name: YTH domain containing 1
Gene Type: protein_coding
Species: Pan_troglodytes
Status: putative
Strand: Plus strand
Length: 36715 bases
Position: chr4:62088013-62124727
Accession: 12940
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTRP00000071213	YTH	PF04146.15	1.1e-39	1	1
ENSPTRP00000027697	YTH	PF04146.15	1.7e-39	1	1
ENSPTRP00000077492	YTH	PF04146.15	1.8e-39	1	1
ENSPTRP00000053484	YTH	PF04146.15	1.8e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTRT00000030009	-	3263	XM_003310368	ENSPTRP00000027697	709 (aa)	XP_003310416	H2QPJ9
ENSPTRT00000030007	-	3341	XM_009447803	ENSPTRP00000053484	735 (aa)	XP_009446078	H2RA35
ENSPTRT00000108572	-	2184	-	ENSPTRP00000077492	727 (aa)	-	A0A2I3SKQ4
ENSPTRT00000080997	-	1611	-	ENSPTRP00000071213	536 (aa)	-	A0A2I3S2Q3

Gene Model

Click here to download ENSPTRG00000016105's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000016105's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTRG00000016105	YTHDC1	100	99.728	ENSG00000083896	YTHDC1	100	99.728	Homo_sapiens
ENSPTRG00000016105	YTHDC1	58	59.102	ENSAPOG00000013997	ythdc1	57	62.500	Acanthochromis_polyacanthus
ENSPTRG00000016105	YTHDC1	100	96.346	ENSAMEG00000005688	YTHDC1	100	96.346	Ailuropoda_melanoleuca
ENSPTRG00000016105	YTHDC1	64	69.531	ENSACIG00000019728	ythdc1	80	59.649	Amphilophus_citrinellus
ENSPTRG00000016105	YTHDC1	58	60.360	ENSAOCG00000000239	ythdc1	59	67.703	Amphiprion_ocellaris
ENSPTRG00000016105	YTHDC1	50	64.420	ENSAPEG00000000618	ythdc1	53	68.946	Amphiprion_percula
ENSPTRG00000016105	YTHDC1	97	82.852	ENSAPLG00000009921	YTHDC1	92	85.863	Anas_platyrhynchos
ENSPTRG00000016105	YTHDC1	97	81.923	ENSACAG00000009697	YTHDC1	93	82.991	Anolis_carolinensis
ENSPTRG00000016105	YTHDC1	100	99.014	ENSANAG00000001522	YTHDC1	100	99.014	Aotus_nancymaae
ENSPTRG00000016105	YTHDC1	93	50.980	ENSACLG00000019371	ythdc1	59	66.268	Astatotilapia_calliptera
ENSPTRG00000016105	YTHDC1	97	61.278	ENSAMXG00000006978	ythdc1	92	65.973	Astyanax_mexicanus
ENSPTRG00000016105	YTHDC1	100	96.472	ENSBTAG00000015572	YTHDC1	100	96.472	Bos_taurus
ENSPTRG00000016105	YTHDC1	100	99.437	ENSCJAG00000009934	YTHDC1	100	99.437	Callithrix_jacchus
ENSPTRG00000016105	YTHDC1	100	96.346	ENSCAFG00000002821	YTHDC1	100	96.346	Canis_familiaris
ENSPTRG00000016105	YTHDC1	100	96.346	ENSCAFG00020027112	YTHDC1	100	96.346	Canis_lupus_dingo
ENSPTRG00000016105	YTHDC1	99	96.442	ENSCHIG00000004810	YTHDC1	97	96.442	Capra_hircus
ENSPTRG00000016105	YTHDC1	100	99.013	ENSTSYG00000011668	YTHDC1	100	99.013	Carlito_syrichta
ENSPTRG00000016105	YTHDC1	98	71.857	ENSCAPG00000008722	YTHDC1	90	69.969	Cavia_aperea
ENSPTRG00000016105	YTHDC1	97	96.008	ENSCPOG00000010929	YTHDC1	100	90.973	Cavia_porcellus
ENSPTRG00000016105	YTHDC1	100	99.436	ENSCCAG00000035754	YTHDC1	100	99.436	Cebus_capucinus
ENSPTRG00000016105	YTHDC1	100	99.592	ENSCATG00000036320	YTHDC1	100	99.592	Cercocebus_atys
ENSPTRG00000016105	YTHDC1	99	97.793	ENSCLAG00000005482	YTHDC1	99	97.793	Chinchilla_lanigera
ENSPTRG00000016105	YTHDC1	100	98.505	ENSCSAG00000005252	YTHDC1	100	98.505	Chlorocebus_sabaeus
ENSPTRG00000016105	YTHDC1	97	85.356	ENSCPBG00000021965	YTHDC1	94	86.433	Chrysemys_picta_bellii
ENSPTRG00000016105	YTHDC1	100	99.718	ENSCANG00000004769	YTHDC1	100	99.718	Colobus_angolensis_palliatus
ENSPTRG00000016105	YTHDC1	100	97.415	ENSCGRG00001000816	Ythdc1	100	97.415	Cricetulus_griseus_chok1gshd
ENSPTRG00000016105	YTHDC1	99	97.286	ENSCGRG00000009807	Ythdc1	99	97.286	Cricetulus_griseus_crigri
ENSPTRG00000016105	YTHDC1	58	59.307	ENSCSEG00000020404	ythdc1	59	66.906	Cynoglossus_semilaevis
ENSPTRG00000016105	YTHDC1	51	67.518	ENSCVAG00000022349	ythdc1	59	65.783	Cyprinodon_variegatus
ENSPTRG00000016105	YTHDC1	97	59.733	ENSDARG00000051953	ythdc1	58	78.378	Danio_rerio
ENSPTRG00000016105	YTHDC1	100	95.788	ENSDNOG00000004949	YTHDC1	100	95.788	Dasypus_novemcinctus
ENSPTRG00000016105	YTHDC1	99	98.352	ENSDORG00000013045	Ythdc1	100	98.288	Dipodomys_ordii
ENSPTRG00000016105	YTHDC1	79	100.000	ENSETEG00000001878	YTHDC1	78	100.000	Echinops_telfairi
ENSPTRG00000016105	YTHDC1	100	96.888	ENSEASG00005018383	YTHDC1	100	96.888	Equus_asinus_asinus
ENSPTRG00000016105	YTHDC1	100	96.482	ENSECAG00000018303	YTHDC1	100	97.281	Equus_caballus
ENSPTRG00000016105	YTHDC1	100	95.658	ENSEEUG00000015466	YTHDC1	100	95.658	Erinaceus_europaeus
ENSPTRG00000016105	YTHDC1	96	60.646	ENSELUG00000014029	ythdc1	95	62.974	Esox_lucius
ENSPTRG00000016105	YTHDC1	100	97.191	ENSFCAG00000026791	YTHDC1	100	97.191	Felis_catus
ENSPTRG00000016105	YTHDC1	69	88.063	ENSFALG00000006581	YTHDC1	87	92.124	Ficedula_albicollis
ENSPTRG00000016105	YTHDC1	99	97.711	ENSFDAG00000018560	YTHDC1	100	97.711	Fukomys_damarensis
ENSPTRG00000016105	YTHDC1	65	66.667	ENSFHEG00000001286	ythdc1	60	55.449	Fundulus_heteroclitus
ENSPTRG00000016105	YTHDC1	64	64.311	ENSGMOG00000018815	ythdc1	79	64.311	Gadus_morhua
ENSPTRG00000016105	YTHDC1	99	84.701	ENSGALG00000035906	YTHDC1	91	84.888	Gallus_gallus
ENSPTRG00000016105	YTHDC1	70	65.052	ENSGAFG00000001759	ythdc1	54	67.391	Gambusia_affinis
ENSPTRG00000016105	YTHDC1	58	62.326	ENSGACG00000015486	ythdc1	57	63.017	Gasterosteus_aculeatus
ENSPTRG00000016105	YTHDC1	97	85.769	ENSGAGG00000007108	YTHDC1	93	86.510	Gopherus_agassizii
ENSPTRG00000016105	YTHDC1	100	99.592	ENSGGOG00000021958	YTHDC1	100	99.592	Gorilla_gorilla
ENSPTRG00000016105	YTHDC1	93	54.297	ENSHBUG00000019288	ythdc1	59	66.268	Haplochromis_burtoni
ENSPTRG00000016105	YTHDC1	100	97.551	ENSHGLG00000006319	-	100	97.551	Heterocephalus_glaber_female
ENSPTRG00000016105	YTHDC1	96	71.954	ENSHGLG00000003239	-	67	73.501	Heterocephalus_glaber_female
ENSPTRG00000016105	YTHDC1	100	96.494	ENSHGLG00100001556	-	100	96.694	Heterocephalus_glaber_male
ENSPTRG00000016105	YTHDC1	96	70.000	ENSHGLG00100008060	-	68	71.538	Heterocephalus_glaber_male
ENSPTRG00000016105	YTHDC1	54	70.213	ENSHCOG00000001520	ythdc1	84	70.213	Hippocampus_comes
ENSPTRG00000016105	YTHDC1	97	65.524	ENSIPUG00000018136	ythdc1	61	82.232	Ictalurus_punctatus
ENSPTRG00000016105	YTHDC1	100	98.913	ENSSTOG00000013652	YTHDC1	100	98.913	Ictidomys_tridecemlineatus
ENSPTRG00000016105	YTHDC1	97	91.313	ENSJJAG00000010268	Ythdc1	93	93.304	Jaculus_jaculus
ENSPTRG00000016105	YTHDC1	58	59.417	ENSKMAG00000006483	ythdc1	85	65.476	Kryptolebias_marmoratus
ENSPTRG00000016105	YTHDC1	64	63.462	ENSLBEG00000020831	ythdc1	72	75.000	Labrus_bergylta
ENSPTRG00000016105	YTHDC1	90	71.457	ENSLACG00000004893	YTHDC1	92	73.261	Latimeria_chalumnae
ENSPTRG00000016105	YTHDC1	93	73.246	ENSLOCG00000003045	ythdc1	92	87.028	Lepisosteus_oculatus
ENSPTRG00000016105	YTHDC1	100	97.007	ENSLAFG00000021592	YTHDC1	100	97.007	Loxodonta_africana
ENSPTRG00000016105	YTHDC1	100	99.728	ENSMFAG00000031927	YTHDC1	100	99.728	Macaca_fascicularis
ENSPTRG00000016105	YTHDC1	100	99.725	ENSMMUG00000002265	YTHDC1	100	99.725	Macaca_mulatta
ENSPTRG00000016105	YTHDC1	100	99.718	ENSMNEG00000033751	YTHDC1	100	99.718	Macaca_nemestrina
ENSPTRG00000016105	YTHDC1	100	99.577	ENSMLEG00000042147	YTHDC1	100	99.577	Mandrillus_leucophaeus
ENSPTRG00000016105	YTHDC1	55	61.871	ENSMAMG00000013122	ythdc1	58	66.826	Mastacembelus_armatus
ENSPTRG00000016105	YTHDC1	93	50.980	ENSMZEG00005023173	ythdc1	59	66.268	Maylandia_zebra
ENSPTRG00000016105	YTHDC1	97	81.696	ENSMGAG00000010391	YTHDC1	92	85.337	Meleagris_gallopavo
ENSPTRG00000016105	YTHDC1	100	97.143	ENSMAUG00000001286	Ythdc1	100	97.143	Mesocricetus_auratus
ENSPTRG00000016105	YTHDC1	100	98.100	ENSMICG00000034640	YTHDC1	100	98.100	Microcebus_murinus
ENSPTRG00000016105	YTHDC1	100	97.415	ENSMOCG00000020201	Ythdc1	100	97.415	Microtus_ochrogaster
ENSPTRG00000016105	YTHDC1	66	56.904	ENSMODG00000009173	-	88	60.427	Monodelphis_domestica
ENSPTRG00000016105	YTHDC1	85	73.818	ENSMODG00000014337	-	95	69.802	Monodelphis_domestica
ENSPTRG00000016105	YTHDC1	95	52.794	ENSMODG00000010076	-	96	51.689	Monodelphis_domestica
ENSPTRG00000016105	YTHDC1	97	88.031	ENSMODG00000020754	-	92	87.665	Monodelphis_domestica
ENSPTRG00000016105	YTHDC1	59	67.797	ENSMALG00000013412	ythdc1	56	69.341	Monopterus_albus
ENSPTRG00000016105	YTHDC1	99	95.018	MGP_CAROLIEiJ_G0027347	Ythdc1	96	95.018	Mus_caroli
ENSPTRG00000016105	YTHDC1	100	96.879	ENSMUSG00000035851	Ythdc1	100	96.879	Mus_musculus
ENSPTRG00000016105	YTHDC1	100	97.151	MGP_PahariEiJ_G0017126	Ythdc1	100	97.151	Mus_pahari
ENSPTRG00000016105	YTHDC1	100	97.151	MGP_SPRETEiJ_G0028339	Ythdc1	100	97.151	Mus_spretus
ENSPTRG00000016105	YTHDC1	99	96.276	ENSMLUG00000016300	YTHDC1	100	96.276	Myotis_lucifugus
ENSPTRG00000016105	YTHDC1	81	89.066	ENSNGAG00000024000	Ythdc1	93	96.675	Nannospalax_galili
ENSPTRG00000016105	YTHDC1	60	63.665	ENSNBRG00000007663	ythdc1	70	66.019	Neolamprologus_brichardi
ENSPTRG00000016105	YTHDC1	99	98.898	ENSNLEG00000009202	YTHDC1	99	98.898	Nomascus_leucogenys
ENSPTRG00000016105	YTHDC1	82	81.940	ENSMEUG00000007128	YTHDC1	81	81.940	Notamacropus_eugenii
ENSPTRG00000016105	YTHDC1	75	98.867	ENSOPRG00000008986	YTHDC1	74	98.867	Ochotona_princeps
ENSPTRG00000016105	YTHDC1	100	97.179	ENSODEG00000001715	YTHDC1	100	97.179	Octodon_degus
ENSPTRG00000016105	YTHDC1	93	54.492	ENSONIG00000012651	ythdc1	59	66.746	Oreochromis_niloticus
ENSPTRG00000016105	YTHDC1	89	77.064	ENSOANG00000014398	YTHDC1	55	97.468	Ornithorhynchus_anatinus
ENSPTRG00000016105	YTHDC1	97	77.290	ENSOCUG00000015886	YTHDC1	57	93.842	Oryctolagus_cuniculus
ENSPTRG00000016105	YTHDC1	56	61.111	ENSORLG00000030544	ythdc1	60	66.988	Oryzias_latipes
ENSPTRG00000016105	YTHDC1	56	60.386	ENSORLG00020019316	ythdc1	60	66.988	Oryzias_latipes_hni
ENSPTRG00000016105	YTHDC1	93	53.242	ENSOMEG00000000551	ythdc1	72	53.818	Oryzias_melastigma
ENSPTRG00000016105	YTHDC1	100	96.735	ENSOGAG00000003362	YTHDC1	100	96.735	Otolemur_garnettii
ENSPTRG00000016105	YTHDC1	100	96.472	ENSOARG00000008633	YTHDC1	100	96.472	Ovis_aries
ENSPTRG00000016105	YTHDC1	100	100.000	ENSPPAG00000041315	YTHDC1	100	100.000	Pan_paniscus
ENSPTRG00000016105	YTHDC1	100	97.425	ENSPPRG00000011979	YTHDC1	100	97.425	Panthera_pardus
ENSPTRG00000016105	YTHDC1	99	97.115	ENSPTIG00000015527	YTHDC1	100	97.115	Panthera_tigris_altaica
ENSPTRG00000016105	YTHDC1	100	99.592	ENSPANG00000021590	YTHDC1	100	99.592	Papio_anubis
ENSPTRG00000016105	YTHDC1	97	67.748	ENSPKIG00000018497	ythdc1	93	68.103	Paramormyrops_kingsleyae
ENSPTRG00000016105	YTHDC1	97	85.549	ENSPSIG00000002782	YTHDC1	92	85.884	Pelodiscus_sinensis
ENSPTRG00000016105	YTHDC1	56	56.667	ENSPMGG00000000970	-	75	64.808	Periophthalmus_magnuspinnatus
ENSPTRG00000016105	YTHDC1	99	97.655	ENSPEMG00000013850	Ythdc1	100	97.568	Peromyscus_maniculatus_bairdii
ENSPTRG00000016105	YTHDC1	97	87.838	ENSPCIG00000006870	YTHDC1	92	88.244	Phascolarctos_cinereus
ENSPTRG00000016105	YTHDC1	51	65.693	ENSPFOG00000013404	ythdc1	60	65.625	Poecilia_formosa
ENSPTRG00000016105	YTHDC1	51	65.693	ENSPLAG00000011079	ythdc1	85	65.625	Poecilia_latipinna
ENSPTRG00000016105	YTHDC1	51	65.693	ENSPMEG00000009238	ythdc1	60	65.625	Poecilia_mexicana
ENSPTRG00000016105	YTHDC1	68	63.370	ENSPREG00000016973	ythdc1	76	51.521	Poecilia_reticulata
ENSPTRG00000016105	YTHDC1	88	98.438	ENSPPYG00000014726	YTHDC1	100	98.438	Pongo_abelii
ENSPTRG00000016105	YTHDC1	77	100.000	ENSPCAG00000009607	YTHDC1	77	93.860	Procavia_capensis
ENSPTRG00000016105	YTHDC1	100	93.623	ENSPCOG00000019105	YTHDC1	100	93.623	Propithecus_coquereli
ENSPTRG00000016105	YTHDC1	100	94.189	ENSPVAG00000015551	YTHDC1	100	94.189	Pteropus_vampyrus
ENSPTRG00000016105	YTHDC1	93	50.980	ENSPNYG00000011687	ythdc1	59	66.268	Pundamilia_nyererei
ENSPTRG00000016105	YTHDC1	97	68.880	ENSPNAG00000028365	ythdc1	93	68.813	Pygocentrus_nattereri
ENSPTRG00000016105	YTHDC1	100	96.346	ENSRNOG00000001996	Ythdc1	100	96.346	Rattus_norvegicus
ENSPTRG00000016105	YTHDC1	99	98.623	ENSRBIG00000028279	YTHDC1	99	98.623	Rhinopithecus_bieti
ENSPTRG00000016105	YTHDC1	100	99.718	ENSRROG00000035028	YTHDC1	100	99.718	Rhinopithecus_roxellana
ENSPTRG00000016105	YTHDC1	100	99.457	ENSSBOG00000022353	YTHDC1	100	99.457	Saimiri_boliviensis_boliviensis
ENSPTRG00000016105	YTHDC1	97	88.031	ENSSHAG00000002538	YTHDC1	91	87.500	Sarcophilus_harrisii
ENSPTRG00000016105	YTHDC1	97	66.603	ENSSFOG00015003298	ythdc1	60	84.419	Scleropages_formosus
ENSPTRG00000016105	YTHDC1	58	59.251	ENSSMAG00000009086	ythdc1	60	65.947	Scophthalmus_maximus
ENSPTRG00000016105	YTHDC1	55	61.017	ENSSDUG00000022008	ythdc1	59	67.225	Seriola_dumerili
ENSPTRG00000016105	YTHDC1	55	61.017	ENSSLDG00000007926	ythdc1	59	67.225	Seriola_lalandi_dorsalis
ENSPTRG00000016105	YTHDC1	80	97.099	ENSSARG00000010960	YTHDC1	100	97.099	Sorex_araneus
ENSPTRG00000016105	YTHDC1	97	80.385	ENSSPUG00000009357	YTHDC1	92	83.915	Sphenodon_punctatus
ENSPTRG00000016105	YTHDC1	58	61.261	ENSSPAG00000011449	ythdc1	59	67.703	Stegastes_partitus
ENSPTRG00000016105	YTHDC1	100	96.761	ENSSSCG00000035505	YTHDC1	100	96.761	Sus_scrofa
ENSPTRG00000016105	YTHDC1	97	84.586	ENSTGUG00000004452	-	92	85.337	Taeniopygia_guttata
ENSPTRG00000016105	YTHDC1	63	69.231	ENSTRUG00000010142	ythdc1	69	70.000	Takifugu_rubripes
ENSPTRG00000016105	YTHDC1	89	63.636	ENSTNIG00000013243	ythdc1	89	65.068	Tetraodon_nigroviridis
ENSPTRG00000016105	YTHDC1	96	86.408	ENSTBEG00000011546	YTHDC1	92	86.784	Tupaia_belangeri
ENSPTRG00000016105	YTHDC1	100	95.399	ENSTTRG00000005083	YTHDC1	100	95.399	Tursiops_truncatus
ENSPTRG00000016105	YTHDC1	93	97.277	ENSUAMG00000010388	YTHDC1	100	97.277	Ursus_americanus
ENSPTRG00000016105	YTHDC1	99	83.172	ENSUMAG00000013668	YTHDC1	98	83.172	Ursus_maritimus
ENSPTRG00000016105	YTHDC1	100	98.166	ENSVPAG00000009040	YTHDC1	100	98.166	Vicugna_pacos
ENSPTRG00000016105	YTHDC1	99	97.397	ENSVVUG00000005387	YTHDC1	100	96.076	Vulpes_vulpes
ENSPTRG00000016105	YTHDC1	97	70.229	ENSXETG00000017960	ythdc1	91	72.504	Xenopus_tropicalis
ENSPTRG00000016105	YTHDC1	71	50.000	ENSXCOG00000000530	ythdc1	87	51.361	Xiphophorus_couchianus
ENSPTRG00000016105	YTHDC1	58	58.482	ENSXMAG00000005196	ythdc1	61	64.904	Xiphophorus_maculatus