EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPTRG00000016233 (Gene tree)
Gene ID: 461277
Gene Symbol: MRPS18C
Alias: -
Full Name: mitochondrial ribosomal protein S18C
Gene Type: protein_coding
Species: Pan_troglodytes
Status: putative
Strand: Minus strand
Length: 5485 bases
Position: chr4:46958737-46964221
Accession: 639
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTRP00000027890	Ribosomal_S18	PF01084.20	9.6e-23	1	1
ENSPTRP00000062972	Ribosomal_S18	PF01084.20	4.4e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTRT00000030213	-	796	XM_009447624	ENSPTRP00000027890	142 (aa)	XP_517249	H2QPT6
ENSPTRT00000086246	-	207	XM_009447627	ENSPTRP00000073806	68 (aa)	XP_009445902	A0A2I3SBD1
ENSPTRT00000083538	-	712	XM_009447625	ENSPTRP00000062972	114 (aa)	XP_009445901	A0A2I3RF11

Gene Model

Click here to download ENSPTRG00000016233's gene model file

Pathways

Pathway ID	Pathway Name	Source
ptr03010	Ribosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000016233's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPTRG00000016233	MRPS18C	100	77.193	ENSPTRG00000047058	-	100	77.193

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTRG00000016233	MRPS18C	100	100.000	ENSG00000163319	MRPS18C	100	100.000	Homo_sapiens
ENSPTRG00000016233	MRPS18C	100	79.577	ENSAMEG00000004915	MRPS18C	100	79.577	Ailuropoda_melanoleuca
ENSPTRG00000016233	MRPS18C	99	81.513	ENSANAG00000025323	-	94	81.513	Aotus_nancymaae
ENSPTRG00000016233	MRPS18C	100	81.944	ENSANAG00000028055	-	100	81.944	Aotus_nancymaae
ENSPTRG00000016233	MRPS18C	100	71.930	ENSBTAG00000049836	-	100	71.930	Bos_taurus
ENSPTRG00000016233	MRPS18C	100	81.250	ENSBTAG00000018155	MRPS18C	100	81.250	Bos_taurus
ENSPTRG00000016233	MRPS18C	100	93.103	ENSCJAG00000042247	MRPS18C	100	93.103	Callithrix_jacchus
ENSPTRG00000016233	MRPS18C	100	82.639	ENSCAFG00020010491	MRPS18C	100	82.639	Canis_lupus_dingo
ENSPTRG00000016233	MRPS18C	99	67.606	ENSCHIG00000018805	-	99	67.606	Capra_hircus
ENSPTRG00000016233	MRPS18C	75	69.444	ENSCHIG00000019359	-	98	69.444	Capra_hircus
ENSPTRG00000016233	MRPS18C	91	83.206	ENSCHIG00000004461	-	91	83.206	Capra_hircus
ENSPTRG00000016233	MRPS18C	100	73.239	ENSCHIG00000022740	-	100	73.239	Capra_hircus
ENSPTRG00000016233	MRPS18C	100	67.544	ENSCHIG00000016551	-	100	67.544	Capra_hircus
ENSPTRG00000016233	MRPS18C	100	85.417	ENSTSYG00000012924	MRPS18C	100	85.417	Carlito_syrichta
ENSPTRG00000016233	MRPS18C	100	84.028	ENSCPOG00000009198	MRPS18C	100	84.028	Cavia_porcellus
ENSPTRG00000016233	MRPS18C	100	80.556	ENSCCAG00000028283	-	100	80.556	Cebus_capucinus
ENSPTRG00000016233	MRPS18C	100	93.103	ENSCCAG00000026577	-	100	93.103	Cebus_capucinus
ENSPTRG00000016233	MRPS18C	99	81.560	ENSCCAG00000025155	-	95	81.560	Cebus_capucinus
ENSPTRG00000016233	MRPS18C	100	90.972	ENSCCAG00000019347	-	100	90.972	Cebus_capucinus
ENSPTRG00000016233	MRPS18C	100	95.690	ENSCATG00000040697	MRPS18C	100	95.690	Cercocebus_atys
ENSPTRG00000016233	MRPS18C	100	85.417	ENSCLAG00000017397	-	100	85.417	Chinchilla_lanigera
ENSPTRG00000016233	MRPS18C	100	83.562	ENSCLAG00000008205	-	100	83.562	Chinchilla_lanigera
ENSPTRG00000016233	MRPS18C	98	86.087	ENSCANG00000037347	-	97	86.087	Colobus_angolensis_palliatus
ENSPTRG00000016233	MRPS18C	100	95.690	ENSCANG00000038907	MRPS18C	100	95.690	Colobus_angolensis_palliatus
ENSPTRG00000016233	MRPS18C	100	79.167	ENSCANG00000041165	-	100	79.167	Colobus_angolensis_palliatus
ENSPTRG00000016233	MRPS18C	100	84.028	ENSCGRG00001000103	Mrps18c	100	84.028	Cricetulus_griseus_chok1gshd
ENSPTRG00000016233	MRPS18C	100	84.028	ENSCGRG00000002192	Mrps18c	100	84.028	Cricetulus_griseus_crigri
ENSPTRG00000016233	MRPS18C	99	83.099	ENSDORG00000012749	Mrps18c	100	83.099	Dipodomys_ordii
ENSPTRG00000016233	MRPS18C	100	57.746	ENSETEG00000012223	-	100	57.746	Echinops_telfairi
ENSPTRG00000016233	MRPS18C	100	86.111	ENSEASG00005013234	MRPS18C	100	86.111	Equus_asinus_asinus
ENSPTRG00000016233	MRPS18C	100	86.806	ENSECAG00000020387	MRPS18C	100	86.806	Equus_caballus
ENSPTRG00000016233	MRPS18C	100	61.111	ENSEEUG00000003504	MRPS18C	99	61.111	Erinaceus_europaeus
ENSPTRG00000016233	MRPS18C	100	83.333	ENSFCAG00000042464	MRPS18C	100	83.333	Felis_catus
ENSPTRG00000016233	MRPS18C	100	85.915	ENSFDAG00000000250	-	100	85.915	Fukomys_damarensis
ENSPTRG00000016233	MRPS18C	100	75.352	ENSFDAG00000008778	-	100	75.352	Fukomys_damarensis
ENSPTRG00000016233	MRPS18C	100	77.586	ENSGGOG00000037903	-	100	77.586	Gorilla_gorilla
ENSPTRG00000016233	MRPS18C	100	83.803	ENSGGOG00000008603	MRPS18C	100	83.803	Gorilla_gorilla
ENSPTRG00000016233	MRPS18C	100	86.842	ENSGGOG00000040785	-	100	86.842	Gorilla_gorilla
ENSPTRG00000016233	MRPS18C	100	79.861	ENSHGLG00000020134	-	100	79.861	Heterocephalus_glaber_female
ENSPTRG00000016233	MRPS18C	100	82.877	ENSHGLG00000002953	-	100	82.877	Heterocephalus_glaber_female
ENSPTRG00000016233	MRPS18C	100	77.778	ENSHGLG00000012671	-	98	77.778	Heterocephalus_glaber_female
ENSPTRG00000016233	MRPS18C	100	82.877	ENSHGLG00100016235	-	100	82.877	Heterocephalus_glaber_male
ENSPTRG00000016233	MRPS18C	100	77.778	ENSHGLG00100015568	-	98	77.778	Heterocephalus_glaber_male
ENSPTRG00000016233	MRPS18C	100	79.861	ENSHGLG00100019678	-	100	79.861	Heterocephalus_glaber_male
ENSPTRG00000016233	MRPS18C	100	84.722	ENSSTOG00000007989	MRPS18C	100	84.722	Ictidomys_tridecemlineatus
ENSPTRG00000016233	MRPS18C	100	71.053	ENSJJAG00000022437	Mrps18c	100	71.053	Jaculus_jaculus
ENSPTRG00000016233	MRPS18C	100	84.722	ENSLAFG00000001059	MRPS18C	100	84.722	Loxodonta_africana
ENSPTRG00000016233	MRPS18C	100	79.167	ENSMFAG00000041276	-	100	79.167	Macaca_fascicularis
ENSPTRG00000016233	MRPS18C	100	93.966	ENSMFAG00000003991	MRPS18C	100	93.966	Macaca_fascicularis
ENSPTRG00000016233	MRPS18C	100	83.333	ENSMMUG00000048717	-	100	83.333	Macaca_mulatta
ENSPTRG00000016233	MRPS18C	100	81.944	ENSMMUG00000039146	-	100	81.944	Macaca_mulatta
ENSPTRG00000016233	MRPS18C	100	93.966	ENSMMUG00000015353	MRPS18C	100	93.966	Macaca_mulatta
ENSPTRG00000016233	MRPS18C	100	93.966	ENSMNEG00000043663	MRPS18C	100	93.966	Macaca_nemestrina
ENSPTRG00000016233	MRPS18C	100	75.000	ENSMNEG00000018700	-	100	75.000	Macaca_nemestrina
ENSPTRG00000016233	MRPS18C	100	95.690	ENSMLEG00000038884	MRPS18C	100	95.690	Mandrillus_leucophaeus
ENSPTRG00000016233	MRPS18C	100	84.483	ENSMICG00000032609	-	100	84.483	Microcebus_murinus
ENSPTRG00000016233	MRPS18C	100	79.487	ENSMICG00000037615	-	100	79.487	Microcebus_murinus
ENSPTRG00000016233	MRPS18C	100	81.250	ENSMOCG00000015591	-	100	81.250	Microtus_ochrogaster
ENSPTRG00000016233	MRPS18C	100	79.167	ENSMOCG00000009898	-	100	79.167	Microtus_ochrogaster
ENSPTRG00000016233	MRPS18C	97	72.222	ENSMODG00000020773	MRPS18C	99	72.222	Monodelphis_domestica
ENSPTRG00000016233	MRPS18C	100	78.767	MGP_CAROLIEiJ_G0027458	Mrps18c	100	78.767	Mus_caroli
ENSPTRG00000016233	MRPS18C	100	78.082	ENSMUSG00000016833	Mrps18c	100	78.082	Mus_musculus
ENSPTRG00000016233	MRPS18C	100	80.137	MGP_PahariEiJ_G0017236	Mrps18c	100	80.137	Mus_pahari
ENSPTRG00000016233	MRPS18C	83	77.049	MGP_SPRETEiJ_G0028455	Mrps18c	93	77.049	Mus_spretus
ENSPTRG00000016233	MRPS18C	100	78.472	ENSMLUG00000017057	MRPS18C	100	78.472	Myotis_lucifugus
ENSPTRG00000016233	MRPS18C	87	86.508	ENSNGAG00000015980	Mrps18c	100	83.333	Nannospalax_galili
ENSPTRG00000016233	MRPS18C	100	88.194	ENSNLEG00000018188	-	100	88.194	Nomascus_leucogenys
ENSPTRG00000016233	MRPS18C	100	95.139	ENSNLEG00000009119	MRPS18C	100	95.139	Nomascus_leucogenys
ENSPTRG00000016233	MRPS18C	68	81.443	ENSOPRG00000004113	MRPS18C	68	81.443	Ochotona_princeps
ENSPTRG00000016233	MRPS18C	100	82.192	ENSODEG00000007599	-	100	82.192	Octodon_degus
ENSPTRG00000016233	MRPS18C	100	84.028	ENSODEG00000020349	-	100	84.028	Octodon_degus
ENSPTRG00000016233	MRPS18C	100	81.250	ENSOARG00000002770	MRPS18C	100	81.250	Ovis_aries
ENSPTRG00000016233	MRPS18C	100	100.000	ENSPPAG00000037122	MRPS18C	100	100.000	Pan_paniscus
ENSPTRG00000016233	MRPS18C	100	78.448	ENSPPAG00000037400	-	100	78.448	Pan_paniscus
ENSPTRG00000016233	MRPS18C	100	84.028	ENSPPRG00000011089	MRPS18C	100	84.028	Panthera_pardus
ENSPTRG00000016233	MRPS18C	100	83.333	ENSPTIG00000021242	MRPS18C	100	83.333	Panthera_tigris_altaica
ENSPTRG00000016233	MRPS18C	100	81.944	ENSPANG00000034202	-	100	81.944	Papio_anubis
ENSPTRG00000016233	MRPS18C	100	93.966	ENSPANG00000033931	MRPS18C	100	93.966	Papio_anubis
ENSPTRG00000016233	MRPS18C	100	82.639	ENSPEMG00000008390	Mrps18c	100	82.639	Peromyscus_maniculatus_bairdii
ENSPTRG00000016233	MRPS18C	92	76.692	ENSPCIG00000005376	-	94	76.692	Phascolarctos_cinereus
ENSPTRG00000016233	MRPS18C	70	90.909	ENSPCIG00000019737	-	97	90.909	Phascolarctos_cinereus
ENSPTRG00000016233	MRPS18C	98	64.539	ENSPCIG00000000097	-	99	64.539	Phascolarctos_cinereus
ENSPTRG00000016233	MRPS18C	100	96.528	ENSPPYG00000025867	MRPS18C	100	96.528	Pongo_abelii
ENSPTRG00000016233	MRPS18C	99	90.845	ENSPPYG00000025835	-	99	90.845	Pongo_abelii
ENSPTRG00000016233	MRPS18C	100	80.556	ENSPCAG00000004975	MRPS18C	100	80.556	Procavia_capensis
ENSPTRG00000016233	MRPS18C	100	84.722	ENSPCOG00000017634	MRPS18C	100	84.722	Propithecus_coquereli
ENSPTRG00000016233	MRPS18C	68	77.778	ENSPVAG00000006439	MRPS18C	100	77.778	Pteropus_vampyrus
ENSPTRG00000016233	MRPS18C	100	76.027	ENSRNOG00000002178	Mrps18c	100	76.027	Rattus_norvegicus
ENSPTRG00000016233	MRPS18C	100	78.070	ENSRBIG00000031637	-	100	78.070	Rhinopithecus_bieti
ENSPTRG00000016233	MRPS18C	100	95.690	ENSRBIG00000041685	MRPS18C	100	95.690	Rhinopithecus_bieti
ENSPTRG00000016233	MRPS18C	100	83.803	ENSRBIG00000035023	-	100	83.803	Rhinopithecus_bieti
ENSPTRG00000016233	MRPS18C	100	95.690	ENSRROG00000044334	MRPS18C	100	95.690	Rhinopithecus_roxellana
ENSPTRG00000016233	MRPS18C	100	83.803	ENSRROG00000033834	-	100	83.803	Rhinopithecus_roxellana
ENSPTRG00000016233	MRPS18C	100	77.193	ENSRROG00000030722	-	100	77.193	Rhinopithecus_roxellana
ENSPTRG00000016233	MRPS18C	95	76.642	ENSSBOG00000032292	-	98	76.642	Saimiri_boliviensis_boliviensis
ENSPTRG00000016233	MRPS18C	100	74.648	ENSSBOG00000029234	-	100	74.648	Saimiri_boliviensis_boliviensis
ENSPTRG00000016233	MRPS18C	100	92.361	ENSSBOG00000027568	-	100	92.361	Saimiri_boliviensis_boliviensis
ENSPTRG00000016233	MRPS18C	99	85.315	ENSSBOG00000022205	-	92	85.315	Saimiri_boliviensis_boliviensis
ENSPTRG00000016233	MRPS18C	92	75.735	ENSSHAG00000007084	MRPS18C	94	75.735	Sarcophilus_harrisii
ENSPTRG00000016233	MRPS18C	100	84.028	ENSSSCG00000038042	MRPS18C	100	84.028	Sus_scrofa
ENSPTRG00000016233	MRPS18C	100	82.639	ENSTBEG00000012505	MRPS18C	100	82.639	Tupaia_belangeri
ENSPTRG00000016233	MRPS18C	100	84.722	ENSTTRG00000004897	MRPS18C	100	84.722	Tursiops_truncatus
ENSPTRG00000016233	MRPS18C	100	87.500	ENSUAMG00000012878	MRPS18C	100	87.500	Ursus_americanus
ENSPTRG00000016233	MRPS18C	100	87.500	ENSUMAG00000008829	MRPS18C	100	87.500	Ursus_maritimus
ENSPTRG00000016233	MRPS18C	100	81.944	ENSVPAG00000011358	MRPS18C	100	81.944	Vicugna_pacos
ENSPTRG00000016233	MRPS18C	100	83.333	ENSVVUG00000015672	MRPS18C	100	83.333	Vulpes_vulpes