EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSPTRG00000016403 (Gene tree)
Gene ID
461462
Gene Symbol
PRDM5
Alias
-
Full Name
PR/SET domain 5
Gene Type
protein_coding
Species
Pan_troglodytes
Status
putative
Strand
Minus strand
Length
234901 bases
Position
chr4:123562199-123797099
Accession
12961
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPTRP00000087376zf-C2H2PF00096.269.2e-64110
ENSPTRP00000087376zf-C2H2PF00096.269.2e-64210
ENSPTRP00000087376zf-C2H2PF00096.269.2e-64310
ENSPTRP00000087376zf-C2H2PF00096.269.2e-64410
ENSPTRP00000087376zf-C2H2PF00096.269.2e-64510
ENSPTRP00000087376zf-C2H2PF00096.269.2e-64610
ENSPTRP00000087376zf-C2H2PF00096.269.2e-64710
ENSPTRP00000087376zf-C2H2PF00096.269.2e-64810
ENSPTRP00000087376zf-C2H2PF00096.269.2e-64910
ENSPTRP00000087376zf-C2H2PF00096.269.2e-641010
ENSPTRP00000064297zf-C2H2PF00096.265.3e-60110
ENSPTRP00000064297zf-C2H2PF00096.265.3e-60210
ENSPTRP00000064297zf-C2H2PF00096.265.3e-60310
ENSPTRP00000064297zf-C2H2PF00096.265.3e-60410
ENSPTRP00000064297zf-C2H2PF00096.265.3e-60510
ENSPTRP00000064297zf-C2H2PF00096.265.3e-60610
ENSPTRP00000064297zf-C2H2PF00096.265.3e-60710
ENSPTRP00000064297zf-C2H2PF00096.265.3e-60810
ENSPTRP00000064297zf-C2H2PF00096.265.3e-60910
ENSPTRP00000064297zf-C2H2PF00096.265.3e-601010
ENSPTRP00000028170zf-C2H2PF00096.262.4e-49110
ENSPTRP00000028170zf-C2H2PF00096.262.4e-49210
ENSPTRP00000028170zf-C2H2PF00096.262.4e-49310
ENSPTRP00000028170zf-C2H2PF00096.262.4e-49410
ENSPTRP00000028170zf-C2H2PF00096.262.4e-49510
ENSPTRP00000028170zf-C2H2PF00096.262.4e-49610
ENSPTRP00000028170zf-C2H2PF00096.262.4e-49710
ENSPTRP00000028170zf-C2H2PF00096.262.4e-49810
ENSPTRP00000028170zf-C2H2PF00096.262.4e-49910
ENSPTRP00000028170zf-C2H2PF00096.262.4e-491010
ENSPTRP00000085657zf-C2H2PF00096.261.1e-4216
ENSPTRP00000085657zf-C2H2PF00096.261.1e-4226
ENSPTRP00000085657zf-C2H2PF00096.261.1e-4236
ENSPTRP00000085657zf-C2H2PF00096.261.1e-4246
ENSPTRP00000085657zf-C2H2PF00096.261.1e-4256
ENSPTRP00000085657zf-C2H2PF00096.261.1e-4266
ENSPTRP00000069287zf-C2H2PF00096.261.1e-2615
ENSPTRP00000069287zf-C2H2PF00096.261.1e-2625
ENSPTRP00000069287zf-C2H2PF00096.261.1e-2635
ENSPTRP00000069287zf-C2H2PF00096.261.1e-2645
ENSPTRP00000069287zf-C2H2PF00096.261.1e-2655
ENSPTRP00000087376zf-metPF12874.78.1e-2314
ENSPTRP00000087376zf-metPF12874.78.1e-2324
ENSPTRP00000087376zf-metPF12874.78.1e-2334
ENSPTRP00000087376zf-metPF12874.78.1e-2344
ENSPTRP00000085657zf-metPF12874.71.4e-2013
ENSPTRP00000085657zf-metPF12874.71.4e-2023
ENSPTRP00000085657zf-metPF12874.71.4e-2033
ENSPTRP00000064297zf-metPF12874.71.5e-1913
ENSPTRP00000064297zf-metPF12874.71.5e-1923
ENSPTRP00000064297zf-metPF12874.71.5e-1933
ENSPTRP00000028170zf-metPF12874.71.4e-1613
ENSPTRP00000028170zf-metPF12874.71.4e-1623
ENSPTRP00000028170zf-metPF12874.71.4e-1633
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPTRT00000082300-5159XM_009448211ENSPTRP00000085657501 (aa)XP_009446486A0A2I3T8V2
ENSPTRT00000105307-666-ENSPTRP00000069287221 (aa)-A0A2I3RY95
ENSPTRT00000110385-336-ENSPTRP00000075523111 (aa)-A0A2I3SER0
ENSPTRT00000030504-1248-ENSPTRP00000028170415 (aa)-H2QQ36
ENSPTRT00000087378-5245XM_003310461ENSPTRP00000064297599 (aa)XP_003310509A0A2I3RHY7
ENSPTRT00000088647-5343XM_001151366ENSPTRP00000087376630 (aa)XP_001151366K7BTV3
Gene Model
Click here to download ENSPTRG00000016403's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000016403's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSPTRG00000016403PRDM57741.325ENSPTRG00000011108ZNF2267340.610
ENSPTRG00000016403PRDM57338.411ENSPTRG00000049327-8034.279
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPTRG00000016403PRDM510099.841ENSG00000138738PRDM510099.841Homo_sapiens
ENSPTRG00000016403PRDM510089.333ENSAPOG00000023220prdm510089.333Acanthochromis_polyacanthus
ENSPTRG00000016403PRDM59191.493ENSAMEG00000003050PRDM510092.138Ailuropoda_melanoleuca
ENSPTRG00000016403PRDM510089.333ENSACIG00000000406prdm510089.333Amphilophus_citrinellus
ENSPTRG00000016403PRDM510089.333ENSAOCG00000014806prdm510089.333Amphiprion_ocellaris
ENSPTRG00000016403PRDM59779.132ENSAPEG00000016846prdm510073.913Amphiprion_percula
ENSPTRG00000016403PRDM510089.333ENSATEG00000013829prdm510089.333Anabas_testudineus
ENSPTRG00000016403PRDM59390.190ENSAPLG00000013828PRDM510090.190Anas_platyrhynchos
ENSPTRG00000016403PRDM510090.190ENSACAG00000012999PRDM510090.190Anolis_carolinensis
ENSPTRG00000016403PRDM5100100.000ENSANAG00000027411PRDM5100100.000Aotus_nancymaae
ENSPTRG00000016403PRDM510089.333ENSACLG00000017996prdm510089.333Astatotilapia_calliptera
ENSPTRG00000016403PRDM58089.423ENSAMXG00000041864prdm59979.737Astyanax_mexicanus
ENSPTRG00000016403PRDM510098.734ENSBTAG00000012111PRDM510098.734Bos_taurus
ENSPTRG00000016403PRDM510099.548ENSCJAG00000003133PRDM510099.548Callithrix_jacchus
ENSPTRG00000016403PRDM58799.497ENSCAFG00000004179PRDM59699.497Canis_familiaris
ENSPTRG00000016403PRDM510099.367ENSCAFG00020017685PRDM510099.367Canis_lupus_dingo
ENSPTRG00000016403PRDM510098.418ENSCHIG00000018772PRDM510098.418Capra_hircus
ENSPTRG00000016403PRDM59497.276ENSTSYG00000009630PRDM59598.473Carlito_syrichta
ENSPTRG00000016403PRDM59098.667ENSCAPG00000015217PRDM510099.474Cavia_aperea
ENSPTRG00000016403PRDM59598.734ENSCPOG00000012883PRDM510099.474Cavia_porcellus
ENSPTRG00000016403PRDM5100100.000ENSCCAG00000023157PRDM5100100.000Cebus_capucinus
ENSPTRG00000016403PRDM5100100.000ENSCATG00000042510PRDM5100100.000Cercocebus_atys
ENSPTRG00000016403PRDM59598.734ENSCLAG00000005392PRDM510099.474Chinchilla_lanigera
ENSPTRG00000016403PRDM510099.333ENSCSAG00000003729PRDM510099.684Chlorocebus_sabaeus
ENSPTRG00000016403PRDM59998.667ENSCHOG00000007801PRDM58998.667Choloepus_hoffmanni
ENSPTRG00000016403PRDM510090.506ENSCPBG00000024735PRDM510090.506Chrysemys_picta_bellii
ENSPTRG00000016403PRDM5100100.000ENSCANG00000036807PRDM5100100.000Colobus_angolensis_palliatus
ENSPTRG00000016403PRDM510097.831ENSCGRG00001010581Prdm510097.831Cricetulus_griseus_chok1gshd
ENSPTRG00000016403PRDM58896.000ENSCGRG00000010996-9997.417Cricetulus_griseus_crigri
ENSPTRG00000016403PRDM510088.667ENSCSEG00000019979prdm510088.667Cynoglossus_semilaevis
ENSPTRG00000016403PRDM510089.333ENSCVAG00000013692prdm510089.333Cyprinodon_variegatus
ENSPTRG00000016403PRDM59891.096ENSDARG00000006288prdm59988.462Danio_rerio
ENSPTRG00000016403PRDM59197.043ENSDNOG00000002009PRDM510098.107Dasypus_novemcinctus
ENSPTRG00000016403PRDM510097.785ENSDORG00000007739Prdm510097.785Dipodomys_ordii
ENSPTRG00000016403PRDM58898.291ENSETEG00000020268PRDM59085.039Echinops_telfairi
ENSPTRG00000016403PRDM59989.933ENSEBUG00000004301prdm510089.933Eptatretus_burgeri
ENSPTRG00000016403PRDM510099.518ENSEASG00005018365PRDM510099.518Equus_asinus_asinus
ENSPTRG00000016403PRDM510087.500ENSECAG00000024747-10087.500Equus_caballus
ENSPTRG00000016403PRDM59998.696ENSECAG00000011516PRDM59098.696Equus_caballus
ENSPTRG00000016403PRDM59996.875ENSEEUG00000010306PRDM510096.875Erinaceus_europaeus
ENSPTRG00000016403PRDM59893.443ENSELUG00000005894prdm59389.427Esox_lucius
ENSPTRG00000016403PRDM510099.051ENSFCAG00000025656PRDM510099.051Felis_catus
ENSPTRG00000016403PRDM59980.685ENSFALG00000008381PRDM510080.685Ficedula_albicollis
ENSPTRG00000016403PRDM510099.277ENSFDAG00000021361PRDM510099.277Fukomys_damarensis
ENSPTRG00000016403PRDM59891.096ENSFHEG00000013040prdm59991.096Fundulus_heteroclitus
ENSPTRG00000016403PRDM59794.118ENSGMOG00000012038prdm510093.333Gadus_morhua
ENSPTRG00000016403PRDM510090.000ENSGALG00000011963PRDM510090.000Gallus_gallus
ENSPTRG00000016403PRDM59893.443ENSGAFG00000019233prdm59589.427Gambusia_affinis
ENSPTRG00000016403PRDM59893.750ENSGAGG00000020362PRDM59993.750Gopherus_agassizii
ENSPTRG00000016403PRDM5100100.000ENSGGOG00000013562PRDM5100100.000Gorilla_gorilla
ENSPTRG00000016403PRDM510089.333ENSHBUG00000023375prdm510089.333Haplochromis_burtoni
ENSPTRG00000016403PRDM59697.980ENSHGLG00000003010PRDM59997.980Heterocephalus_glaber_female
ENSPTRG00000016403PRDM510099.548ENSHGLG00100003696PRDM510099.548Heterocephalus_glaber_male
ENSPTRG00000016403PRDM59989.933ENSHCOG00000012131prdm59988.571Hippocampus_comes
ENSPTRG00000016403PRDM59893.750ENSIPUG00000001248prdm510089.333Ictalurus_punctatus
ENSPTRG00000016403PRDM59594.620ENSSTOG00000004741PRDM510096.316Ictidomys_tridecemlineatus
ENSPTRG00000016403PRDM59798.000ENSJJAG00000011464Prdm510098.101Jaculus_jaculus
ENSPTRG00000016403PRDM510088.667ENSKMAG00000013663prdm510088.667Kryptolebias_marmoratus
ENSPTRG00000016403PRDM510089.333ENSLBEG00000022736prdm510089.333Labrus_bergylta
ENSPTRG00000016403PRDM58790.506ENSLACG00000009187PRDM59990.506Latimeria_chalumnae
ENSPTRG00000016403PRDM59989.933ENSLOCG00000009778prdm59989.933Lepisosteus_oculatus
ENSPTRG00000016403PRDM510098.000ENSLAFG00000006532PRDM510099.051Loxodonta_africana
ENSPTRG00000016403PRDM5100100.000ENSMFAG00000045845PRDM5100100.000Macaca_fascicularis
ENSPTRG00000016403PRDM5100100.000ENSMMUG00000003249PRDM5100100.000Macaca_mulatta
ENSPTRG00000016403PRDM5100100.000ENSMNEG00000019018PRDM5100100.000Macaca_nemestrina
ENSPTRG00000016403PRDM59599.332ENSMLEG00000023145PRDM510099.684Mandrillus_leucophaeus
ENSPTRG00000016403PRDM510088.667ENSMAMG00000013419prdm510088.667Mastacembelus_armatus
ENSPTRG00000016403PRDM510089.333ENSMZEG00005020645prdm510089.333Maylandia_zebra
ENSPTRG00000016403PRDM59389.873ENSMGAG00000010710PRDM510089.873Meleagris_gallopavo
ENSPTRG00000016403PRDM510097.831ENSMAUG00000006768Prdm510097.831Mesocricetus_auratus
ENSPTRG00000016403PRDM510098.795ENSMICG00000001459PRDM510098.795Microcebus_murinus
ENSPTRG00000016403PRDM510097.831ENSMOCG00000016267Prdm510097.831Microtus_ochrogaster
ENSPTRG00000016403PRDM510089.333ENSMMOG00000006035prdm510089.333Mola_mola
ENSPTRG00000016403PRDM510089.333ENSMODG00000018942PRDM510089.333Monodelphis_domestica
ENSPTRG00000016403PRDM510089.333ENSMALG00000013934prdm510089.333Monopterus_albus
ENSPTRG00000016403PRDM510098.072MGP_CAROLIEiJ_G0028463Prdm510098.072Mus_caroli
ENSPTRG00000016403PRDM510097.831ENSMUSG00000029913Prdm510097.831Mus_musculus
ENSPTRG00000016403PRDM510098.072MGP_PahariEiJ_G0022203Prdm510098.072Mus_pahari
ENSPTRG00000016403PRDM510097.831MGP_SPRETEiJ_G0029467Prdm510097.831Mus_spretus
ENSPTRG00000016403PRDM510098.734ENSMPUG00000017415PRDM510098.734Mustela_putorius_furo
ENSPTRG00000016403PRDM58790.625ENSMLUG00000006097PRDM510090.625Myotis_lucifugus
ENSPTRG00000016403PRDM510098.101ENSNGAG00000018317Prdm510098.101Nannospalax_galili
ENSPTRG00000016403PRDM59878.367ENSNBRG00000004976prdm510081.132Neolamprologus_brichardi
ENSPTRG00000016403PRDM5100100.000ENSNLEG00000009107PRDM5100100.000Nomascus_leucogenys
ENSPTRG00000016403PRDM59089.831ENSMEUG00000006576-7191.525Notamacropus_eugenii
ENSPTRG00000016403PRDM58797.338ENSOPRG00000011066-8976.507Ochotona_princeps
ENSPTRG00000016403PRDM59999.051ENSODEG00000009133PRDM510099.051Octodon_degus
ENSPTRG00000016403PRDM510089.333ENSONIG00000003111prdm59988.608Oreochromis_niloticus
ENSPTRG00000016403PRDM59893.939ENSOANG00000015109PRDM59793.939Ornithorhynchus_anatinus
ENSPTRG00000016403PRDM57586.667ENSOANG00000006197-10086.667Ornithorhynchus_anatinus
ENSPTRG00000016403PRDM59388.927ENSOCUG00000013454PRDM510090.460Oryctolagus_cuniculus
ENSPTRG00000016403PRDM510089.333ENSORLG00000016247prdm510089.333Oryzias_latipes
ENSPTRG00000016403PRDM510089.333ENSORLG00020018051prdm510089.333Oryzias_latipes_hni
ENSPTRG00000016403PRDM510089.333ENSORLG00015013760prdm510089.333Oryzias_latipes_hsok
ENSPTRG00000016403PRDM510089.333ENSOMEG00000005143prdm510089.333Oryzias_melastigma
ENSPTRG00000016403PRDM57698.667ENSOGAG00000009996PRDM59398.667Otolemur_garnettii
ENSPTRG00000016403PRDM59198.120ENSOARG00000015473PRDM510099.495Ovis_aries
ENSPTRG00000016403PRDM59599.667ENSPPAG00000043045PRDM510099.830Pan_paniscus
ENSPTRG00000016403PRDM510099.051ENSPPRG00000001020PRDM510099.051Panthera_pardus
ENSPTRG00000016403PRDM59597.183ENSPTIG00000010807PRDM59599.051Panthera_tigris_altaica
ENSPTRG00000016403PRDM5100100.000ENSPANG00000023612PRDM5100100.000Papio_anubis
ENSPTRG00000016403PRDM510087.288ENSPKIG00000015492prdm510087.288Paramormyrops_kingsleyae
ENSPTRG00000016403PRDM510090.506ENSPSIG00000013505PRDM510090.506Pelodiscus_sinensis
ENSPTRG00000016403PRDM510088.667ENSPMGG00000012622prdm510088.667Periophthalmus_magnuspinnatus
ENSPTRG00000016403PRDM56791.753ENSPMAG00000005248prdm510091.753Petromyzon_marinus
ENSPTRG00000016403PRDM59877.273ENSPFOG00000018630prdm59978.075Poecilia_formosa
ENSPTRG00000016403PRDM510089.333ENSPLAG00000014148prdm510088.608Poecilia_latipinna
ENSPTRG00000016403PRDM510089.333ENSPMEG00000018002prdm510089.333Poecilia_mexicana
ENSPTRG00000016403PRDM510089.333ENSPREG00000018366prdm510089.333Poecilia_reticulata
ENSPTRG00000016403PRDM510099.684ENSPPYG00000015031PRDM510099.684Pongo_abelii
ENSPTRG00000016403PRDM58898.000ENSPCAG00000011671PRDM59698.000Procavia_capensis
ENSPTRG00000016403PRDM510099.095ENSPCOG00000022828PRDM510099.095Propithecus_coquereli
ENSPTRG00000016403PRDM59394.620ENSPVAG00000012309PRDM510094.620Pteropus_vampyrus
ENSPTRG00000016403PRDM510089.333ENSPNYG00000012194prdm510089.333Pundamilia_nyererei
ENSPTRG00000016403PRDM58984.615ENSPNAG00000023191-9786.986Pygocentrus_nattereri
ENSPTRG00000016403PRDM59891.096ENSPNAG00000026181prdm59991.096Pygocentrus_nattereri
ENSPTRG00000016403PRDM59992.226ENSRNOG00000023679Prdm59992.226Rattus_norvegicus
ENSPTRG00000016403PRDM5100100.000ENSRBIG00000041307PRDM5100100.000Rhinopithecus_bieti
ENSPTRG00000016403PRDM58893.827ENSRROG00000035343PRDM59693.827Rhinopithecus_roxellana
ENSPTRG00000016403PRDM510099.548ENSSBOG00000022100PRDM510099.548Saimiri_boliviensis_boliviensis
ENSPTRG00000016403PRDM58591.803ENSSHAG00000003250PRDM510089.868Sarcophilus_harrisii
ENSPTRG00000016403PRDM510090.000ENSSFOG00015020478prdm510090.000Scleropages_formosus
ENSPTRG00000016403PRDM510089.333ENSSMAG00000018844prdm510089.333Scophthalmus_maximus
ENSPTRG00000016403PRDM59993.443ENSSDUG00000020397prdm510089.333Seriola_dumerili
ENSPTRG00000016403PRDM59993.814ENSSLDG00000013353prdm510089.333Seriola_lalandi_dorsalis
ENSPTRG00000016403PRDM593100.000ENSSARG00000014129-8097.436Sorex_araneus
ENSPTRG00000016403PRDM510090.950ENSSPUG00000009941PRDM510090.950Sphenodon_punctatus
ENSPTRG00000016403PRDM510089.333ENSSPAG00000013866prdm510088.291Stegastes_partitus
ENSPTRG00000016403PRDM510099.367ENSSSCG00000009101PRDM510099.367Sus_scrofa
ENSPTRG00000016403PRDM59390.190ENSTGUG00000001920PRDM510090.190Taeniopygia_guttata
ENSPTRG00000016403PRDM510089.333ENSTRUG00000013850prdm510089.333Takifugu_rubripes
ENSPTRG00000016403PRDM510075.497ENSTNIG00000005901prdm510070.943Tetraodon_nigroviridis
ENSPTRG00000016403PRDM59593.425ENSTBEG00000015386PRDM58596.970Tupaia_belangeri
ENSPTRG00000016403PRDM510098.734ENSTTRG00000010996PRDM510098.734Tursiops_truncatus
ENSPTRG00000016403PRDM59397.436ENSUAMG00000009994PRDM58497.436Ursus_americanus
ENSPTRG00000016403PRDM59599.367ENSUMAG00000003733PRDM59999.740Ursus_maritimus
ENSPTRG00000016403PRDM59787.418ENSVPAG00000007435PRDM510087.418Vicugna_pacos
ENSPTRG00000016403PRDM59397.274ENSVVUG00000013192PRDM510099.367Vulpes_vulpes
ENSPTRG00000016403PRDM510082.979ENSXETG00000002101prdm510082.979Xenopus_tropicalis
ENSPTRG00000016403PRDM510089.333ENSXCOG00000008567prdm510089.333Xiphophorus_couchianus
ENSPTRG00000016403PRDM59893.443ENSXMAG00000013825prdm510089.333Xiphophorus_maculatus

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