EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPTRG00000016437 (Gene tree)
Gene ID: 461482
Gene Symbol: LARP1B
Alias: -
Full Name: La ribonucleoprotein domain family member 1B
Gene Type: protein_coding
Species: Pan_troglodytes
Status: putative
Strand: Plus strand
Length: 151639 bases
Position: chr4:131083523-131235161
Accession: 2980
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTRP00000088437	La	PF05383.17	5.2e-22	1	1
ENSPTRP00000089468	La	PF05383.17	6e-22	1	1
ENSPTRP00000040974	La	PF05383.17	1.2e-21	1	1
ENSPTRP00000087086	La	PF05383.17	1.3e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTRT00000050965	-	1557	XM_016952199	ENSPTRP00000040974	518 (aa)	XP_016807688	H2R0N2
ENSPTRT00000082704	-	4702	XM_009448267	ENSPTRP00000087086	914 (aa)	XP_009446542	K7CU93
ENSPTRT00000102627	-	2871	XM_009448275	ENSPTRP00000088437	335 (aa)	XP_009446550	A0A2I3TGS5
ENSPTRT00000078594	-	1074	-	ENSPTRP00000089468	357 (aa)	-	A0A2I3TKN0

Gene Model

Click here to download ENSPTRG00000016437's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000016437's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPTRG00000016437	LARP1B	96	59.451	ENSPTRG00000017447	LARP1	87	59.320

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTRG00000016437	LARP1B	100	99.421	ENSG00000138709	LARP1B	100	99.421	Homo_sapiens
ENSPTRG00000016437	LARP1B	97	56.742	ENSAPOG00000020101	larp1b	83	56.813	Acanthochromis_polyacanthus
ENSPTRG00000016437	LARP1B	100	91.045	ENSAMEG00000002748	LARP1B	100	91.045	Ailuropoda_melanoleuca
ENSPTRG00000016437	LARP1B	96	54.945	ENSACIG00000023890	larp1b	82	54.348	Amphilophus_citrinellus
ENSPTRG00000016437	LARP1B	97	48.387	ENSAOCG00000014268	larp1b	84	54.317	Amphiprion_ocellaris
ENSPTRG00000016437	LARP1B	98	57.375	ENSAPEG00000004126	larp1b	84	56.397	Amphiprion_percula
ENSPTRG00000016437	LARP1B	99	56.064	ENSATEG00000017849	larp1b	84	56.183	Anabas_testudineus
ENSPTRG00000016437	LARP1B	96	68.282	ENSAPLG00000010129	LARP1B	98	68.247	Anas_platyrhynchos
ENSPTRG00000016437	LARP1B	98	74.319	ENSACAG00000011338	LARP1B	86	77.230	Anolis_carolinensis
ENSPTRG00000016437	LARP1B	99	87.329	ENSANAG00000034618	LARP1B	100	77.871	Aotus_nancymaae
ENSPTRG00000016437	LARP1B	96	56.087	ENSACLG00000011948	larp1b	82	56.498	Astatotilapia_calliptera
ENSPTRG00000016437	LARP1B	84	56.005	ENSAMXG00000006805	larp1b	81	52.508	Astyanax_mexicanus
ENSPTRG00000016437	LARP1B	100	88.974	ENSBTAG00000012135	LARP1B	99	87.308	Bos_taurus
ENSPTRG00000016437	LARP1B	100	95.753	ENSCJAG00000003338	LARP1B	100	95.753	Callithrix_jacchus
ENSPTRG00000016437	LARP1B	100	90.949	ENSCAFG00000003831	LARP1B	100	90.949	Canis_familiaris
ENSPTRG00000016437	LARP1B	100	91.642	ENSCAFG00020018899	LARP1B	100	91.642	Canis_lupus_dingo
ENSPTRG00000016437	LARP1B	100	88.690	ENSCHIG00000023144	LARP1B	100	88.690	Capra_hircus
ENSPTRG00000016437	LARP1B	98	84.498	ENSTSYG00000002037	-	100	81.180	Carlito_syrichta
ENSPTRG00000016437	LARP1B	76	91.071	ENSCPOG00000034668	-	93	91.071	Cavia_porcellus
ENSPTRG00000016437	LARP1B	100	96.332	ENSCCAG00000021948	LARP1B	100	96.332	Cebus_capucinus
ENSPTRG00000016437	LARP1B	100	96.389	ENSCATG00000013541	LARP1B	100	96.389	Cercocebus_atys
ENSPTRG00000016437	LARP1B	100	86.269	ENSCLAG00000006448	-	100	86.269	Chinchilla_lanigera
ENSPTRG00000016437	LARP1B	100	97.052	ENSCSAG00000003582	LARP1B	100	97.052	Chlorocebus_sabaeus
ENSPTRG00000016437	LARP1B	100	81.550	ENSCHOG00000005354	LARP1B	99	81.441	Choloepus_hoffmanni
ENSPTRG00000016437	LARP1B	99	76.175	ENSCPBG00000017480	LARP1B	86	76.393	Chrysemys_picta_bellii
ENSPTRG00000016437	LARP1B	100	91.739	ENSCANG00000026958	LARP1B	100	91.739	Colobus_angolensis_palliatus
ENSPTRG00000016437	LARP1B	100	89.552	ENSCGRG00001004660	-	100	89.552	Cricetulus_griseus_chok1gshd
ENSPTRG00000016437	LARP1B	100	89.254	ENSCGRG00000001914	-	100	89.254	Cricetulus_griseus_crigri
ENSPTRG00000016437	LARP1B	96	54.458	ENSCSEG00000013519	larp1b	85	53.838	Cynoglossus_semilaevis
ENSPTRG00000016437	LARP1B	97	55.484	ENSCVAG00000005046	larp1b	84	55.111	Cyprinodon_variegatus
ENSPTRG00000016437	LARP1B	97	53.564	ENSDARG00000061169	larp1b	78	54.447	Danio_rerio
ENSPTRG00000016437	LARP1B	98	89.970	ENSDNOG00000018765	-	100	87.867	Dasypus_novemcinctus
ENSPTRG00000016437	LARP1B	89	82.353	ENSETEG00000012497	LARP1B	89	82.353	Echinops_telfairi
ENSPTRG00000016437	LARP1B	94	51.676	ENSEBUG00000003668	larp1b	87	51.404	Eptatretus_burgeri
ENSPTRG00000016437	LARP1B	99	92.216	ENSEASG00005018106	LARP1B	99	92.216	Equus_asinus_asinus
ENSPTRG00000016437	LARP1B	98	92.097	ENSECAG00000001088	LARP1B	81	88.743	Equus_caballus
ENSPTRG00000016437	LARP1B	70	52.648	ENSELUG00000023774	larp1b	72	52.799	Esox_lucius
ENSPTRG00000016437	LARP1B	100	91.045	ENSFCAG00000014650	-	100	91.045	Felis_catus
ENSPTRG00000016437	LARP1B	100	68.152	ENSFALG00000008098	LARP1B	99	69.348	Ficedula_albicollis
ENSPTRG00000016437	LARP1B	97	56.009	ENSFHEG00000010264	larp1b	79	56.176	Fundulus_heteroclitus
ENSPTRG00000016437	LARP1B	83	65.986	ENSGMOG00000005207	larp1b	62	67.687	Gadus_morhua
ENSPTRG00000016437	LARP1B	98	69.301	ENSGALG00000010207	LARP1B	87	69.011	Gallus_gallus
ENSPTRG00000016437	LARP1B	91	58.169	ENSGAFG00000012012	larp1b	93	58.440	Gambusia_affinis
ENSPTRG00000016437	LARP1B	97	52.086	ENSGACG00000004609	larp1b	83	54.439	Gasterosteus_aculeatus
ENSPTRG00000016437	LARP1B	99	76.009	ENSGAGG00000017209	LARP1B	85	76.227	Gopherus_agassizii
ENSPTRG00000016437	LARP1B	100	99.228	ENSGGOG00000015900	LARP1B	100	99.228	Gorilla_gorilla
ENSPTRG00000016437	LARP1B	96	56.474	ENSHBUG00000009730	larp1b	82	56.620	Haplochromis_burtoni
ENSPTRG00000016437	LARP1B	97	74.233	ENSHGLG00000013922	-	96	73.394	Heterocephalus_glaber_female
ENSPTRG00000016437	LARP1B	100	84.956	ENSHGLG00000006728	-	99	85.251	Heterocephalus_glaber_female
ENSPTRG00000016437	LARP1B	100	85.672	ENSHGLG00100014041	-	99	85.586	Heterocephalus_glaber_male
ENSPTRG00000016437	LARP1B	97	74.233	ENSHGLG00100016491	-	96	73.394	Heterocephalus_glaber_male
ENSPTRG00000016437	LARP1B	76	59.632	ENSHCOG00000000918	larp1b	96	60.198	Hippocampus_comes
ENSPTRG00000016437	LARP1B	86	59.080	ENSIPUG00000012138	larp1b	80	54.797	Ictalurus_punctatus
ENSPTRG00000016437	LARP1B	100	88.988	ENSSTOG00000008596	-	100	88.988	Ictidomys_tridecemlineatus
ENSPTRG00000016437	LARP1B	99	80.967	ENSSTOG00000021917	-	94	80.967	Ictidomys_tridecemlineatus
ENSPTRG00000016437	LARP1B	91	66.013	ENSSTOG00000033183	-	97	65.101	Ictidomys_tridecemlineatus
ENSPTRG00000016437	LARP1B	96	74.455	ENSSTOG00000034510	-	91	70.487	Ictidomys_tridecemlineatus
ENSPTRG00000016437	LARP1B	99	84.985	ENSJJAG00000022360	Larp1b	99	84.985	Jaculus_jaculus
ENSPTRG00000016437	LARP1B	96	54.167	ENSKMAG00000011589	larp1b	84	55.098	Kryptolebias_marmoratus
ENSPTRG00000016437	LARP1B	97	56.082	ENSLBEG00000005655	larp1b	85	54.839	Labrus_bergylta
ENSPTRG00000016437	LARP1B	99	71.319	ENSLACG00000015247	LARP1B	100	68.193	Latimeria_chalumnae
ENSPTRG00000016437	LARP1B	99	63.263	ENSLOCG00000010684	larp1b	93	64.842	Lepisosteus_oculatus
ENSPTRG00000016437	LARP1B	99	91.071	ENSLAFG00000008473	-	99	91.566	Loxodonta_africana
ENSPTRG00000016437	LARP1B	100	98.069	ENSMFAG00000002218	LARP1B	100	98.069	Macaca_fascicularis
ENSPTRG00000016437	LARP1B	70	93.103	ENSMFAG00000003306	-	94	93.103	Macaca_fascicularis
ENSPTRG00000016437	LARP1B	100	97.876	ENSMMUG00000021347	LARP1B	100	97.876	Macaca_mulatta
ENSPTRG00000016437	LARP1B	91	97.500	ENSMNEG00000030406	LARP1B	100	97.500	Macaca_nemestrina
ENSPTRG00000016437	LARP1B	65	93.706	ENSMNEG00000027747	-	94	93.706	Macaca_nemestrina
ENSPTRG00000016437	LARP1B	100	93.545	ENSMLEG00000009306	LARP1B	100	93.545	Mandrillus_leucophaeus
ENSPTRG00000016437	LARP1B	99	55.861	ENSMAMG00000000081	larp1b	85	55.966	Mastacembelus_armatus
ENSPTRG00000016437	LARP1B	76	61.891	ENSMZEG00005002545	larp1b	94	60.733	Maylandia_zebra
ENSPTRG00000016437	LARP1B	94	62.819	ENSMGAG00000004809	LARP1B	98	62.693	Meleagris_gallopavo
ENSPTRG00000016437	LARP1B	100	88.657	ENSMAUG00000007879	-	100	88.657	Mesocricetus_auratus
ENSPTRG00000016437	LARP1B	98	70.392	ENSMICG00000028052	-	99	70.751	Microcebus_murinus
ENSPTRG00000016437	LARP1B	99	76.257	ENSMICG00000037883	-	97	76.257	Microcebus_murinus
ENSPTRG00000016437	LARP1B	100	92.836	ENSMICG00000036111	LARP1B	100	92.836	Microcebus_murinus
ENSPTRG00000016437	LARP1B	79	90.494	ENSMOCG00000001490	Larp1b	95	90.494	Microtus_ochrogaster
ENSPTRG00000016437	LARP1B	99	85.060	ENSMODG00000012300	LARP1B	81	85.605	Monodelphis_domestica
ENSPTRG00000016437	LARP1B	99	56.051	ENSMALG00000003638	larp1b	84	56.742	Monopterus_albus
ENSPTRG00000016437	LARP1B	100	87.463	MGP_CAROLIEiJ_G0024962	Larp1b	100	87.463	Mus_caroli
ENSPTRG00000016437	LARP1B	100	88.657	ENSMUSG00000025762	Larp1b	100	88.657	Mus_musculus
ENSPTRG00000016437	LARP1B	100	88.358	MGP_PahariEiJ_G0026403	Larp1b	100	88.358	Mus_pahari
ENSPTRG00000016437	LARP1B	100	88.657	MGP_SPRETEiJ_G0025897	Larp1b	100	88.657	Mus_spretus
ENSPTRG00000016437	LARP1B	98	92.097	ENSMPUG00000017365	LARP1B	81	89.727	Mustela_putorius_furo
ENSPTRG00000016437	LARP1B	96	82.108	ENSMLUG00000010229	LARP1B	97	82.108	Myotis_lucifugus
ENSPTRG00000016437	LARP1B	76	56.815	ENSNBRG00000023846	larp1b	77	56.550	Neolamprologus_brichardi
ENSPTRG00000016437	LARP1B	100	98.263	ENSNLEG00000013819	LARP1B	100	98.263	Nomascus_leucogenys
ENSPTRG00000016437	LARP1B	87	80.769	ENSMEUG00000010308	LARP1B	88	80.769	Notamacropus_eugenii
ENSPTRG00000016437	LARP1B	98	73.252	ENSOPRG00000005478	LARP1B	99	71.397	Ochotona_princeps
ENSPTRG00000016437	LARP1B	100	86.567	ENSODEG00000001292	-	100	86.567	Octodon_degus
ENSPTRG00000016437	LARP1B	96	55.390	ENSONIG00000012386	larp1b	93	55.246	Oreochromis_niloticus
ENSPTRG00000016437	LARP1B	98	90.881	ENSOCUG00000013330	LARP1B	98	87.322	Oryctolagus_cuniculus
ENSPTRG00000016437	LARP1B	97	55.952	ENSORLG00000017954	larp1b	82	56.074	Oryzias_latipes
ENSPTRG00000016437	LARP1B	97	55.844	ENSORLG00020013081	larp1b	82	55.965	Oryzias_latipes_hni
ENSPTRG00000016437	LARP1B	97	56.074	ENSORLG00015009580	larp1b	82	56.074	Oryzias_latipes_hsok
ENSPTRG00000016437	LARP1B	97	55.748	ENSOMEG00000004210	larp1b	82	55.857	Oryzias_melastigma
ENSPTRG00000016437	LARP1B	99	88.889	ENSOGAG00000005771	LARP1B	98	88.800	Otolemur_garnettii
ENSPTRG00000016437	LARP1B	100	88.755	ENSOARG00000015300	LARP1B	100	88.755	Ovis_aries
ENSPTRG00000016437	LARP1B	100	99.720	ENSPPAG00000030439	LARP1B	100	99.720	Pan_paniscus
ENSPTRG00000016437	LARP1B	100	91.045	ENSPPRG00000002743	-	100	91.045	Panthera_pardus
ENSPTRG00000016437	LARP1B	100	91.045	ENSPTIG00000011225	LARP1B	100	91.045	Panthera_tigris_altaica
ENSPTRG00000016437	LARP1B	100	97.812	ENSPANG00000012488	LARP1B	100	97.812	Papio_anubis
ENSPTRG00000016437	LARP1B	96	51.007	ENSPKIG00000014360	larp1b	89	50.728	Paramormyrops_kingsleyae
ENSPTRG00000016437	LARP1B	96	77.098	ENSPSIG00000012885	LARP1B	93	76.644	Pelodiscus_sinensis
ENSPTRG00000016437	LARP1B	79	60.414	ENSPMGG00000007207	larp1b	84	60.276	Periophthalmus_magnuspinnatus
ENSPTRG00000016437	LARP1B	94	52.323	ENSPMAG00000002700	larp1b	94	53.254	Petromyzon_marinus
ENSPTRG00000016437	LARP1B	99	84.331	ENSPCIG00000026516	LARP1B	98	84.780	Phascolarctos_cinereus
ENSPTRG00000016437	LARP1B	98	51.193	ENSPFOG00000022837	-	78	50.733	Poecilia_formosa
ENSPTRG00000016437	LARP1B	97	56.092	ENSPFOG00000019519	larp1b	82	55.882	Poecilia_formosa
ENSPTRG00000016437	LARP1B	97	57.313	ENSPLAG00000007115	larp1b	82	57.096	Poecilia_latipinna
ENSPTRG00000016437	LARP1B	97	56.926	ENSPMEG00000001224	larp1b	81	56.710	Poecilia_mexicana
ENSPTRG00000016437	LARP1B	80	55.594	ENSPREG00000005955	-	93	53.535	Poecilia_reticulata
ENSPTRG00000016437	LARP1B	100	84.590	ENSPCAG00000007546	LARP1B	99	84.590	Procavia_capensis
ENSPTRG00000016437	LARP1B	100	91.940	ENSPCOG00000021874	LARP1B	100	91.940	Propithecus_coquereli
ENSPTRG00000016437	LARP1B	100	82.713	ENSPVAG00000005373	LARP1B	99	82.495	Pteropus_vampyrus
ENSPTRG00000016437	LARP1B	76	62.410	ENSPNYG00000017357	larp1b	94	61.257	Pundamilia_nyererei
ENSPTRG00000016437	LARP1B	96	55.740	ENSPNAG00000008823	larp1b	84	55.437	Pygocentrus_nattereri
ENSPTRG00000016437	LARP1B	100	89.851	ENSRNOG00000038366	Larp1b	100	89.851	Rattus_norvegicus
ENSPTRG00000016437	LARP1B	100	88.060	ENSRBIG00000038568	-	92	88.060	Rhinopithecus_bieti
ENSPTRG00000016437	LARP1B	100	96.139	ENSRBIG00000039982	-	100	96.139	Rhinopithecus_bieti
ENSPTRG00000016437	LARP1B	100	78.507	ENSRROG00000038525	-	96	78.507	Rhinopithecus_roxellana
ENSPTRG00000016437	LARP1B	100	98.069	ENSRROG00000030771	LARP1B	100	98.069	Rhinopithecus_roxellana
ENSPTRG00000016437	LARP1B	98	86.061	ENSSHAG00000014474	LARP1B	100	84.478	Sarcophilus_harrisii
ENSPTRG00000016437	LARP1B	96	55.940	ENSSMAG00000006347	larp1b	92	55.158	Scophthalmus_maximus
ENSPTRG00000016437	LARP1B	96	56.754	ENSSDUG00000004182	larp1b	82	56.284	Seriola_dumerili
ENSPTRG00000016437	LARP1B	78	59.917	ENSSLDG00000014613	larp1b	73	58.455	Seriola_lalandi_dorsalis
ENSPTRG00000016437	LARP1B	98	73.294	ENSSPUG00000011837	LARP1B	97	67.731	Sphenodon_punctatus
ENSPTRG00000016437	LARP1B	97	56.297	ENSSPAG00000017772	larp1b	82	56.189	Stegastes_partitus
ENSPTRG00000016437	LARP1B	73	55.967	ENSSSCG00000040491	-	99	75.862	Sus_scrofa
ENSPTRG00000016437	LARP1B	98	90.274	ENSSSCG00000034280	LARP1B	99	92.784	Sus_scrofa
ENSPTRG00000016437	LARP1B	89	69.948	ENSTGUG00000002098	-	96	66.818	Taeniopygia_guttata
ENSPTRG00000016437	LARP1B	98	52.511	ENSTRUG00000005612	larp1b	82	54.148	Takifugu_rubripes
ENSPTRG00000016437	LARP1B	96	53.291	ENSTNIG00000012398	larp1b	94	54.516	Tetraodon_nigroviridis
ENSPTRG00000016437	LARP1B	87	87.500	ENSTBEG00000004177	LARP1B	88	81.731	Tupaia_belangeri
ENSPTRG00000016437	LARP1B	100	79.803	ENSTTRG00000012984	LARP1B	99	79.585	Tursiops_truncatus
ENSPTRG00000016437	LARP1B	100	81.194	ENSUAMG00000016938	-	100	80.952	Ursus_americanus
ENSPTRG00000016437	LARP1B	100	90.273	ENSUMAG00000007373	LARP1B	98	90.273	Ursus_maritimus
ENSPTRG00000016437	LARP1B	99	78.711	ENSVPAG00000007223	LARP1B	99	77.949	Vicugna_pacos
ENSPTRG00000016437	LARP1B	100	90.492	ENSVVUG00000011307	LARP1B	100	90.196	Vulpes_vulpes
ENSPTRG00000016437	LARP1B	97	60.177	ENSXETG00000022512	larp1b	87	60.066	Xenopus_tropicalis
ENSPTRG00000016437	LARP1B	73	58.963	ENSXCOG00000004435	larp1b	68	59.314	Xiphophorus_couchianus
ENSPTRG00000016437	LARP1B	97	56.606	ENSXMAG00000008150	larp1b	81	56.742	Xiphophorus_maculatus