EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPTRG00000016472 (Gene tree)
Gene ID: 461517
Gene Symbol: SMARCA5
Alias: -
Full Name: SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 5
Gene Type: protein_coding
Species: Pan_troglodytes
Status: putative
Strand: Plus strand
Length: 39736 bases
Position: chr4:146931889-146971624
Accession: 461517
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTRP00000087304	ResIII	PF04851.15	1e-10	1	1
ENSPTRP00000028278	ResIII	PF04851.15	1.2e-10	1	1
ENSPTRP00000087304	DEAD	PF00270.29	6e-06	1	1
ENSPTRP00000028278	DEAD	PF00270.29	6.9e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTRT00000083278	-	1032	-	ENSPTRP00000092417	343 (aa)	-	A0A2I3TTW0
ENSPTRT00000077835	-	2985	-	ENSPTRP00000087304	994 (aa)	-	A0A2I3TDJ4
ENSPTRT00000030618	-	3603	-	ENSPTRP00000028278	1052 (aa)	-	H2QQ80

Gene Model

Click here to download ENSPTRG00000016472's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000016472's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPTRG00000016472	SMARCA5	60	39.937	ENSPTRG00000013504	CHD6	71	41.162
ENSPTRG00000016472	SMARCA5	50	47.200	ENSPTRG00000002778	HELLS	74	47.200
ENSPTRG00000016472	SMARCA5	99	85.035	ENSPTRG00000049876	SMARCA1	91	86.392
ENSPTRG00000016472	SMARCA5	57	43.455	ENSPTRG00000001220	CHD1L	62	43.455

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTRG00000016472	SMARCA5	100	99.905	ENSG00000153147	SMARCA5	100	99.905	Homo_sapiens
ENSPTRG00000016472	SMARCA5	100	98.669	ENSAMEG00000009585	SMARCA5	100	98.669	Ailuropoda_melanoleuca
ENSPTRG00000016472	SMARCA5	97	96.612	ENSAPLG00000009206	SMARCA5	100	96.612	Anas_platyrhynchos
ENSPTRG00000016472	SMARCA5	99	96.579	ENSACAG00000003038	SMARCA5	96	96.579	Anolis_carolinensis
ENSPTRG00000016472	SMARCA5	100	99.240	ENSANAG00000019345	SMARCA5	100	99.240	Aotus_nancymaae
ENSPTRG00000016472	SMARCA5	99	99.396	ENSBTAG00000003399	SMARCA5	100	98.099	Bos_taurus
ENSPTRG00000016472	SMARCA5	100	99.430	ENSCJAG00000002735	SMARCA5	100	99.430	Callithrix_jacchus
ENSPTRG00000016472	SMARCA5	99	99.496	ENSCAFG00000007525	SMARCA5	100	98.479	Canis_familiaris
ENSPTRG00000016472	SMARCA5	98	99.383	ENSCAFG00020025641	SMARCA5	99	98.450	Canis_lupus_dingo
ENSPTRG00000016472	SMARCA5	100	96.863	ENSCHIG00000016375	-	100	96.863	Capra_hircus
ENSPTRG00000016472	SMARCA5	100	98.574	ENSCHIG00000013730	-	100	98.574	Capra_hircus
ENSPTRG00000016472	SMARCA5	100	99.598	ENSTSYG00000009954	SMARCA5	100	99.598	Carlito_syrichta
ENSPTRG00000016472	SMARCA5	97	98.967	ENSCAPG00000013747	SMARCA5	95	98.967	Cavia_aperea
ENSPTRG00000016472	SMARCA5	99	99.194	ENSCPOG00000002259	SMARCA5	100	98.004	Cavia_porcellus
ENSPTRG00000016472	SMARCA5	100	99.430	ENSCCAG00000027215	SMARCA5	100	99.430	Cebus_capucinus
ENSPTRG00000016472	SMARCA5	100	99.715	ENSCATG00000044917	SMARCA5	100	99.715	Cercocebus_atys
ENSPTRG00000016472	SMARCA5	99	99.194	ENSCLAG00000006153	SMARCA5	100	99.194	Chinchilla_lanigera
ENSPTRG00000016472	SMARCA5	97	100.000	ENSCSAG00000003448	SMARCA5	100	100.000	Chlorocebus_sabaeus
ENSPTRG00000016472	SMARCA5	91	98.292	ENSCHOG00000011724	SMARCA5	90	98.292	Choloepus_hoffmanni
ENSPTRG00000016472	SMARCA5	99	98.089	ENSCPBG00000027535	SMARCA5	96	98.089	Chrysemys_picta_bellii
ENSPTRG00000016472	SMARCA5	100	99.525	ENSCANG00000041629	SMARCA5	100	99.525	Colobus_angolensis_palliatus
ENSPTRG00000016472	SMARCA5	99	99.396	ENSCGRG00001012719	Smarca5	99	97.719	Cricetulus_griseus_chok1gshd
ENSPTRG00000016472	SMARCA5	99	99.396	ENSCGRG00000001417	Smarca5	99	99.396	Cricetulus_griseus_crigri
ENSPTRG00000016472	SMARCA5	99	96.576	ENSDNOG00000009158	SMARCA5	98	95.261	Dasypus_novemcinctus
ENSPTRG00000016472	SMARCA5	95	90.612	ENSDORG00000003466	Smarca5	97	90.612	Dipodomys_ordii
ENSPTRG00000016472	SMARCA5	97	85.744	ENSEBUG00000014773	SMARCA5	96	85.744	Eptatretus_burgeri
ENSPTRG00000016472	SMARCA5	100	98.859	ENSEASG00005001866	SMARCA5	100	98.859	Equus_asinus_asinus
ENSPTRG00000016472	SMARCA5	100	98.859	ENSECAG00000002676	SMARCA5	100	98.859	Equus_caballus
ENSPTRG00000016472	SMARCA5	99	94.965	ENSEEUG00000013176	SMARCA5	100	94.965	Erinaceus_europaeus
ENSPTRG00000016472	SMARCA5	97	89.485	ENSELUG00000014653	SMARCA5	99	89.485	Esox_lucius
ENSPTRG00000016472	SMARCA5	100	98.669	ENSFCAG00000004544	SMARCA5	100	98.669	Felis_catus
ENSPTRG00000016472	SMARCA5	97	97.216	ENSFALG00000004987	SMARCA5	100	97.216	Ficedula_albicollis
ENSPTRG00000016472	SMARCA5	100	99.296	ENSFDAG00000021016	SMARCA5	100	99.396	Fukomys_damarensis
ENSPTRG00000016472	SMARCA5	98	89.560	ENSGMOG00000007519	SMARCA5	94	89.560	Gadus_morhua
ENSPTRG00000016472	SMARCA5	99	97.485	ENSGALG00000009913	SMARCA5	96	97.490	Gallus_gallus
ENSPTRG00000016472	SMARCA5	98	90.686	ENSGACG00000017238	SMARCA5	95	90.686	Gasterosteus_aculeatus
ENSPTRG00000016472	SMARCA5	99	98.189	ENSGAGG00000019882	SMARCA5	96	98.189	Gopherus_agassizii
ENSPTRG00000016472	SMARCA5	100	100.000	ENSGGOG00000012595	SMARCA5	100	100.000	Gorilla_gorilla
ENSPTRG00000016472	SMARCA5	99	89.627	ENSHGLG00000000317	-	95	89.627	Heterocephalus_glaber_female
ENSPTRG00000016472	SMARCA5	99	99.295	ENSHGLG00000000816	-	99	97.814	Heterocephalus_glaber_female
ENSPTRG00000016472	SMARCA5	100	99.195	ENSHGLG00100018421	-	100	99.295	Heterocephalus_glaber_male
ENSPTRG00000016472	SMARCA5	100	98.481	ENSSTOG00000010683	SMARCA5	99	98.481	Ictidomys_tridecemlineatus
ENSPTRG00000016472	SMARCA5	99	99.094	ENSJJAG00000014965	Smarca5	100	97.338	Jaculus_jaculus
ENSPTRG00000016472	SMARCA5	99	95.358	ENSLACG00000007091	SMARCA5	97	95.358	Latimeria_chalumnae
ENSPTRG00000016472	SMARCA5	99	92.284	ENSLOCG00000008966	SMARCA5	96	92.284	Lepisosteus_oculatus
ENSPTRG00000016472	SMARCA5	99	99.496	ENSLAFG00000007795	SMARCA5	100	98.479	Loxodonta_africana
ENSPTRG00000016472	SMARCA5	100	99.715	ENSMFAG00000043649	SMARCA5	100	99.715	Macaca_fascicularis
ENSPTRG00000016472	SMARCA5	100	99.715	ENSMMUG00000000829	SMARCA5	100	99.715	Macaca_mulatta
ENSPTRG00000016472	SMARCA5	100	99.715	ENSMNEG00000031916	SMARCA5	100	99.715	Macaca_nemestrina
ENSPTRG00000016472	SMARCA5	100	99.715	ENSMLEG00000042393	SMARCA5	100	99.715	Mandrillus_leucophaeus
ENSPTRG00000016472	SMARCA5	99	97.485	ENSMGAG00000003517	SMARCA5	99	97.485	Meleagris_gallopavo
ENSPTRG00000016472	SMARCA5	99	99.396	ENSMAUG00000015902	Smarca5	98	99.396	Mesocricetus_auratus
ENSPTRG00000016472	SMARCA5	100	98.859	ENSMICG00000003971	SMARCA5	100	98.859	Microcebus_murinus
ENSPTRG00000016472	SMARCA5	99	98.993	ENSMOCG00000016986	-	99	97.529	Microtus_ochrogaster
ENSPTRG00000016472	SMARCA5	99	98.892	ENSMODG00000000391	SMARCA5	98	96.418	Monodelphis_domestica
ENSPTRG00000016472	SMARCA5	99	99.094	ENSMUSG00000031715	Smarca5	100	97.529	Mus_musculus
ENSPTRG00000016472	SMARCA5	99	99.295	MGP_PahariEiJ_G0022862	Smarca5	100	97.719	Mus_pahari
ENSPTRG00000016472	SMARCA5	100	98.669	ENSMLUG00000000468	SMARCA5	100	98.669	Myotis_lucifugus
ENSPTRG00000016472	SMARCA5	99	99.295	ENSNGAG00000000441	Smarca5	100	97.814	Nannospalax_galili
ENSPTRG00000016472	SMARCA5	100	99.715	ENSNLEG00000005383	SMARCA5	100	99.715	Nomascus_leucogenys
ENSPTRG00000016472	SMARCA5	97	91.322	ENSMEUG00000001267	SMARCA5	100	91.322	Notamacropus_eugenii
ENSPTRG00000016472	SMARCA5	90	98.429	ENSOPRG00000014427	SMARCA5	86	98.429	Ochotona_princeps
ENSPTRG00000016472	SMARCA5	97	98.968	ENSOANG00000013921	SMARCA5	100	98.968	Ornithorhynchus_anatinus
ENSPTRG00000016472	SMARCA5	97	99.587	ENSOCUG00000013042	SMARCA5	100	99.587	Oryctolagus_cuniculus
ENSPTRG00000016472	SMARCA5	100	98.859	ENSOGAG00000009702	SMARCA5	100	98.859	Otolemur_garnettii
ENSPTRG00000016472	SMARCA5	99	99.194	ENSOARG00000010589	SMARCA5	99	98.382	Ovis_aries
ENSPTRG00000016472	SMARCA5	100	99.905	ENSPPAG00000028523	SMARCA5	100	99.905	Pan_paniscus
ENSPTRG00000016472	SMARCA5	99	93.555	ENSPPRG00000004925	SMARCA5	98	93.810	Panthera_pardus
ENSPTRG00000016472	SMARCA5	99	99.496	ENSPTIG00000020959	SMARCA5	97	99.109	Panthera_tigris_altaica
ENSPTRG00000016472	SMARCA5	100	99.715	ENSPANG00000001175	SMARCA5	100	99.715	Papio_anubis
ENSPTRG00000016472	SMARCA5	98	90.779	ENSPKIG00000015699	SMARCA5	98	89.716	Paramormyrops_kingsleyae
ENSPTRG00000016472	SMARCA5	98	91.002	ENSPKIG00000015885	SMARCA5	100	91.237	Paramormyrops_kingsleyae
ENSPTRG00000016472	SMARCA5	99	95.976	ENSPSIG00000004177	SMARCA5	100	95.988	Pelodiscus_sinensis
ENSPTRG00000016472	SMARCA5	97	90.226	ENSPMGG00000012316	SMARCA5	100	90.226	Periophthalmus_magnuspinnatus
ENSPTRG00000016472	SMARCA5	99	99.396	ENSPEMG00000008060	Smarca5	98	99.396	Peromyscus_maniculatus_bairdii
ENSPTRG00000016472	SMARCA5	64	86.739	ENSPMAG00000008026	SMARCA5	99	86.739	Petromyzon_marinus
ENSPTRG00000016472	SMARCA5	99	70.783	ENSPMAG00000006011	SMARCA5	81	85.440	Petromyzon_marinus
ENSPTRG00000016472	SMARCA5	99	98.892	ENSPCIG00000003926	SMARCA5	98	96.318	Phascolarctos_cinereus
ENSPTRG00000016472	SMARCA5	100	99.620	ENSPPYG00000015091	SMARCA5	100	99.620	Pongo_abelii
ENSPTRG00000016472	SMARCA5	84	95.667	ENSPCAG00000014230	SMARCA5	90	90.240	Procavia_capensis
ENSPTRG00000016472	SMARCA5	100	96.103	ENSPCOG00000026744	SMARCA5	100	96.103	Propithecus_coquereli
ENSPTRG00000016472	SMARCA5	99	99.396	ENSPVAG00000006482	SMARCA5	100	98.382	Pteropus_vampyrus
ENSPTRG00000016472	SMARCA5	99	89.909	ENSPNAG00000027824	SMARCA5	97	90.145	Pygocentrus_nattereri
ENSPTRG00000016472	SMARCA5	99	99.194	ENSRNOG00000018149	Smarca5	100	99.196	Rattus_norvegicus
ENSPTRG00000016472	SMARCA5	100	99.525	ENSRBIG00000044644	SMARCA5	100	99.525	Rhinopithecus_bieti
ENSPTRG00000016472	SMARCA5	99	99.899	ENSRROG00000029591	SMARCA5	99	99.899	Rhinopithecus_roxellana
ENSPTRG00000016472	SMARCA5	100	99.144	ENSSBOG00000036257	SMARCA5	100	99.144	Saimiri_boliviensis_boliviensis
ENSPTRG00000016472	SMARCA5	99	98.892	ENSSHAG00000008464	SMARCA5	100	98.892	Sarcophilus_harrisii
ENSPTRG00000016472	SMARCA5	99	90.578	ENSSFOG00015013252	SMARCA5	97	90.050	Scleropages_formosus
ENSPTRG00000016472	SMARCA5	99	96.465	ENSSPUG00000007604	SMARCA5	99	96.465	Sphenodon_punctatus
ENSPTRG00000016472	SMARCA5	99	99.496	ENSSSCG00000009047	SMARCA5	100	98.004	Sus_scrofa
ENSPTRG00000016472	SMARCA5	99	96.680	ENSTGUG00000002408	SMARCA5	99	96.680	Taeniopygia_guttata
ENSPTRG00000016472	SMARCA5	98	99.383	ENSUAMG00000023495	SMARCA5	99	98.643	Ursus_americanus
ENSPTRG00000016472	SMARCA5	99	99.496	ENSUMAG00000015324	SMARCA5	97	99.302	Ursus_maritimus
ENSPTRG00000016472	SMARCA5	100	98.194	ENSVPAG00000008982	SMARCA5	100	98.194	Vicugna_pacos
ENSPTRG00000016472	SMARCA5	100	98.669	ENSVVUG00000017473	SMARCA5	100	98.669	Vulpes_vulpes
ENSPTRG00000016472	SMARCA5	94	93.610	ENSXETG00000017566	smarca5	94	93.610	Xenopus_tropicalis