EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPTRG00000016671 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Pan_troglodytes
Status: putative
Strand: Plus strand
Length: 22408 bases
Position: chr4:194419350-194441757
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTRP00000028594	FRG1	PF06229.12	8.5e-80	1	1
ENSPTRP00000088552	FRG1	PF06229.12	1.5e-74	1	1
ENSPTRP00000072598	FRG1	PF06229.12	1.6e-74	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTRT00000030955	-	1069	XM_016952667	ENSPTRP00000028594	258 (aa)	XP_016808156	H2QQK0
ENSPTRT00000099262	-	684	-	ENSPTRP00000088552	227 (aa)	-	A0A2I3TH34
ENSPTRT00000090962	-	690	-	ENSPTRP00000072598	229 (aa)	-	A0A2I3S7T6

Gene Model

Click here to download ENSPTRG00000016671's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000016671's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPTRG00000016671	-	89	81.818	ENSPTRG00000043123	-	94	81.974
ENSPTRG00000016671	-	99	76.316	ENSPTRG00000052363	-	94	95.050
ENSPTRG00000016671	-	100	100.000	ENSPTRG00000050205	-	100	100.000
ENSPTRG00000016671	-	100	78.723	ENSPTRG00000044710	-	100	78.723
ENSPTRG00000016671	-	100	76.596	ENSPTRG00000050204	-	100	76.596

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTRG00000016671	-	100	100.000	ENSG00000109536	FRG1	100	100.000	Homo_sapiens
ENSPTRG00000016671	-	100	72.868	ENSAPOG00000001060	frg1	100	72.481	Acanthochromis_polyacanthus
ENSPTRG00000016671	-	100	98.837	ENSAMEG00000013503	FRG1	100	98.837	Ailuropoda_melanoleuca
ENSPTRG00000016671	-	88	75.124	ENSACIG00000022283	frg1	100	74.888	Amphilophus_citrinellus
ENSPTRG00000016671	-	88	75.124	ENSAOCG00000024240	frg1	87	74.888	Amphiprion_ocellaris
ENSPTRG00000016671	-	100	71.705	ENSAPEG00000002486	frg1	100	71.705	Amphiprion_percula
ENSPTRG00000016671	-	100	70.614	ENSATEG00000010414	frg1	100	70.155	Anabas_testudineus
ENSPTRG00000016671	-	100	86.047	ENSAPLG00000007785	-	100	85.659	Anas_platyrhynchos
ENSPTRG00000016671	-	100	81.783	ENSACAG00000006877	-	100	80.233	Anolis_carolinensis
ENSPTRG00000016671	-	100	98.837	ENSANAG00000020876	FRG1	100	98.837	Aotus_nancymaae
ENSPTRG00000016671	-	100	68.103	ENSACLG00000027065	frg1	100	65.134	Astatotilapia_calliptera
ENSPTRG00000016671	-	100	72.093	ENSAMXG00000032700	frg1	100	72.481	Astyanax_mexicanus
ENSPTRG00000016671	-	100	98.837	ENSBTAG00000007089	FRG1	100	98.837	Bos_taurus
ENSPTRG00000016671	-	99	41.026	WBGene00014177	frg-1	99	41.026	Caenorhabditis_elegans
ENSPTRG00000016671	-	100	98.837	ENSCJAG00000011272	FRG1	100	98.837	Callithrix_jacchus
ENSPTRG00000016671	-	100	98.837	ENSCAFG00000007135	FRG1	100	98.837	Canis_familiaris
ENSPTRG00000016671	-	89	99.507	ENSCAFG00020000082	-	85	99.531	Canis_lupus_dingo
ENSPTRG00000016671	-	100	98.450	ENSCHIG00000011585	-	100	98.450	Capra_hircus
ENSPTRG00000016671	-	98	68.898	ENSTSYG00000031599	-	100	69.685	Carlito_syrichta
ENSPTRG00000016671	-	93	95.816	ENSCAPG00000016056	-	98	95.816	Cavia_aperea
ENSPTRG00000016671	-	100	97.287	ENSCPOG00000022277	-	100	97.287	Cavia_porcellus
ENSPTRG00000016671	-	100	98.837	ENSCCAG00000024627	FRG1	100	98.837	Cebus_capucinus
ENSPTRG00000016671	-	100	99.225	ENSCATG00000029230	FRG1	100	99.225	Cercocebus_atys
ENSPTRG00000016671	-	100	97.287	ENSCLAG00000000370	-	100	97.287	Chinchilla_lanigera
ENSPTRG00000016671	-	100	82.171	ENSCLAG00000004960	-	100	82.171	Chinchilla_lanigera
ENSPTRG00000016671	-	100	65.504	ENSCLAG00000006068	-	100	65.504	Chinchilla_lanigera
ENSPTRG00000016671	-	99	65.490	ENSCLAG00000009263	-	100	66.275	Chinchilla_lanigera
ENSPTRG00000016671	-	100	99.225	ENSCSAG00000002899	FRG1	100	99.225	Chlorocebus_sabaeus
ENSPTRG00000016671	-	89	93.627	ENSCSAG00000017729	-	100	93.056	Chlorocebus_sabaeus
ENSPTRG00000016671	-	53	99.174	ENSCHOG00000000773	-	75	99.174	Choloepus_hoffmanni
ENSPTRG00000016671	-	88	88.060	ENSCPBG00000009211	-	87	87.556	Chrysemys_picta_bellii
ENSPTRG00000016671	-	99	52.612	ENSCING00000005161	-	99	52.612	Ciona_intestinalis
ENSPTRG00000016671	-	57	54.615	ENSCSAVG00000008018	-	100	48.370	Ciona_savignyi
ENSPTRG00000016671	-	100	99.225	ENSCANG00000020991	FRG1	100	99.225	Colobus_angolensis_palliatus
ENSPTRG00000016671	-	100	96.899	ENSCGRG00001014998	Frg1	100	96.899	Cricetulus_griseus_chok1gshd
ENSPTRG00000016671	-	100	77.519	ENSCGRG00000003902	-	96	76.744	Cricetulus_griseus_crigri
ENSPTRG00000016671	-	100	96.899	ENSCGRG00000011860	-	100	96.899	Cricetulus_griseus_crigri
ENSPTRG00000016671	-	100	64.082	ENSCSEG00000015950	frg1	100	66.397	Cynoglossus_semilaevis
ENSPTRG00000016671	-	100	70.155	ENSCVAG00000009985	frg1	100	70.155	Cyprinodon_variegatus
ENSPTRG00000016671	-	100	74.031	ENSDARG00000056504	frg1	93	82.222	Danio_rerio
ENSPTRG00000016671	-	100	98.062	ENSDNOG00000014886	FRG1	100	98.062	Dasypus_novemcinctus
ENSPTRG00000016671	-	100	84.884	ENSDORG00000016190	Frg1	100	84.884	Dipodomys_ordii
ENSPTRG00000016671	-	100	47.744	FBgn0036964	FRG1	96	43.083	Drosophila_melanogaster
ENSPTRG00000016671	-	100	95.349	ENSETEG00000012349	-	100	95.349	Echinops_telfairi
ENSPTRG00000016671	-	60	51.095	ENSEBUG00000012359	FRG1	89	52.703	Eptatretus_burgeri
ENSPTRG00000016671	-	100	97.287	ENSEASG00005017497	FRG1	100	97.287	Equus_asinus_asinus
ENSPTRG00000016671	-	100	97.287	ENSECAG00000003122	FRG1	100	97.287	Equus_caballus
ENSPTRG00000016671	-	69	97.452	ENSEEUG00000000145	-	100	97.452	Erinaceus_europaeus
ENSPTRG00000016671	-	100	71.705	ENSELUG00000021712	frg1	100	71.705	Esox_lucius
ENSPTRG00000016671	-	100	98.837	ENSFCAG00000025737	FRG1	100	98.837	Felis_catus
ENSPTRG00000016671	-	88	87.065	ENSFALG00000011231	-	88	86.222	Ficedula_albicollis
ENSPTRG00000016671	-	100	84.615	ENSFDAG00000012697	-	100	84.615	Fukomys_damarensis
ENSPTRG00000016671	-	100	96.899	ENSFDAG00000000962	-	100	96.899	Fukomys_damarensis
ENSPTRG00000016671	-	100	68.992	ENSFHEG00000010540	frg1	100	68.992	Fundulus_heteroclitus
ENSPTRG00000016671	-	100	68.605	ENSGMOG00000000867	frg1	100	68.992	Gadus_morhua
ENSPTRG00000016671	-	100	84.109	ENSGALG00000013590	-	100	83.721	Gallus_gallus
ENSPTRG00000016671	-	81	69.524	ENSGAFG00000013855	frg1	100	65.714	Gambusia_affinis
ENSPTRG00000016671	-	100	73.256	ENSGACG00000016888	frg1	100	71.318	Gasterosteus_aculeatus
ENSPTRG00000016671	-	100	84.884	ENSGAGG00000025012	-	100	84.496	Gopherus_agassizii
ENSPTRG00000016671	-	78	87.079	ENSGGOG00000012888	-	97	80.311	Gorilla_gorilla
ENSPTRG00000016671	-	100	67.442	ENSGGOG00000040796	-	100	67.442	Gorilla_gorilla
ENSPTRG00000016671	-	100	69.380	ENSHBUG00000010667	frg1	100	70.155	Haplochromis_burtoni
ENSPTRG00000016671	-	100	96.899	ENSHGLG00000005601	FRG1	100	96.899	Heterocephalus_glaber_female
ENSPTRG00000016671	-	99	90.272	ENSHGLG00000020402	-	94	91.051	Heterocephalus_glaber_female
ENSPTRG00000016671	-	99	88.327	ENSHGLG00000020943	-	99	89.105	Heterocephalus_glaber_female
ENSPTRG00000016671	-	100	78.295	ENSHGLG00000001211	-	100	79.845	Heterocephalus_glaber_female
ENSPTRG00000016671	-	100	96.512	ENSHGLG00100016261	-	100	96.512	Heterocephalus_glaber_male
ENSPTRG00000016671	-	100	78.682	ENSHGLG00100010674	-	100	80.233	Heterocephalus_glaber_male
ENSPTRG00000016671	-	100	75.652	ENSHGLG00100015285	-	100	75.194	Heterocephalus_glaber_male
ENSPTRG00000016671	-	99	88.327	ENSHGLG00100021211	-	99	89.105	Heterocephalus_glaber_male
ENSPTRG00000016671	-	88	73.134	ENSHCOG00000000224	frg1	95	72.197	Hippocampus_comes
ENSPTRG00000016671	-	100	75.581	ENSIPUG00000022716	frg1	100	75.194	Ictalurus_punctatus
ENSPTRG00000016671	-	100	97.674	ENSSTOG00000002857	-	100	97.674	Ictidomys_tridecemlineatus
ENSPTRG00000016671	-	100	97.287	ENSJJAG00000020625	Frg1	100	97.287	Jaculus_jaculus
ENSPTRG00000016671	-	100	69.380	ENSKMAG00000005841	frg1	100	69.380	Kryptolebias_marmoratus
ENSPTRG00000016671	-	100	68.992	ENSLBEG00000001466	frg1	100	70.984	Labrus_bergylta
ENSPTRG00000016671	-	100	71.756	ENSLACG00000010243	frg1	100	71.756	Latimeria_chalumnae
ENSPTRG00000016671	-	100	74.031	ENSLOCG00000013868	frg1	100	75.581	Lepisosteus_oculatus
ENSPTRG00000016671	-	100	97.287	ENSLAFG00000011191	FRG1	100	97.287	Loxodonta_africana
ENSPTRG00000016671	-	98	89.823	ENSMFAG00000042873	-	94	89.823	Macaca_fascicularis
ENSPTRG00000016671	-	100	99.225	ENSMFAG00000031178	FRG1	100	99.225	Macaca_fascicularis
ENSPTRG00000016671	-	100	99.225	ENSMMUG00000001824	FRG1	100	99.225	Macaca_mulatta
ENSPTRG00000016671	-	98	89.823	ENSMMUG00000047496	-	98	89.823	Macaca_mulatta
ENSPTRG00000016671	-	97	92.825	ENSMNEG00000018620	FRG1	100	92.713	Macaca_nemestrina
ENSPTRG00000016671	-	100	99.225	ENSMLEG00000028881	FRG1	100	99.225	Mandrillus_leucophaeus
ENSPTRG00000016671	-	100	71.318	ENSMAMG00000012406	frg1	100	71.318	Mastacembelus_armatus
ENSPTRG00000016671	-	100	68.992	ENSMZEG00005007549	frg1	100	69.767	Maylandia_zebra
ENSPTRG00000016671	-	100	84.496	ENSMGAG00000011481	-	100	84.496	Meleagris_gallopavo
ENSPTRG00000016671	-	100	97.674	ENSMAUG00000000847	Frg1	100	97.674	Mesocricetus_auratus
ENSPTRG00000016671	-	100	99.225	ENSMICG00000046816	FRG1	100	99.225	Microcebus_murinus
ENSPTRG00000016671	-	100	89.922	ENSMOCG00000023000	Frg1	100	89.922	Microtus_ochrogaster
ENSPTRG00000016671	-	88	71.144	ENSMMOG00000004008	frg1	94	70.852	Mola_mola
ENSPTRG00000016671	-	100	91.473	ENSMODG00000019031	-	87	91.473	Monodelphis_domestica
ENSPTRG00000016671	-	100	70.543	ENSMALG00000018497	frg1	100	70.930	Monopterus_albus
ENSPTRG00000016671	-	100	97.287	MGP_CAROLIEiJ_G0031006	Frg1	100	97.287	Mus_caroli
ENSPTRG00000016671	-	100	97.287	ENSMUSG00000031590	Frg1	100	97.287	Mus_musculus
ENSPTRG00000016671	-	100	96.899	MGP_PahariEiJ_G0021475	Frg1	100	96.899	Mus_pahari
ENSPTRG00000016671	-	100	96.899	MGP_SPRETEiJ_G0032120	Frg1	100	96.899	Mus_spretus
ENSPTRG00000016671	-	100	98.837	ENSMPUG00000017962	FRG1	100	98.837	Mustela_putorius_furo
ENSPTRG00000016671	-	100	97.674	ENSMLUG00000023179	FRG1	100	97.674	Myotis_lucifugus
ENSPTRG00000016671	-	100	97.674	ENSNGAG00000016411	Frg1	100	97.674	Nannospalax_galili
ENSPTRG00000016671	-	84	68.317	ENSNBRG00000006806	frg1	95	68.317	Neolamprologus_brichardi
ENSPTRG00000016671	-	98	88.889	ENSNLEG00000036059	-	97	88.889	Nomascus_leucogenys
ENSPTRG00000016671	-	100	98.450	ENSNLEG00000000930	FRG1	100	98.450	Nomascus_leucogenys
ENSPTRG00000016671	-	100	82.443	ENSNLEG00000035849	-	100	83.588	Nomascus_leucogenys
ENSPTRG00000016671	-	94	82.727	ENSNLEG00000028874	-	100	82.727	Nomascus_leucogenys
ENSPTRG00000016671	-	100	70.930	ENSNLEG00000032846	-	100	90.179	Nomascus_leucogenys
ENSPTRG00000016671	-	100	81.538	ENSNLEG00000032333	-	100	81.538	Nomascus_leucogenys
ENSPTRG00000016671	-	62	92.908	ENSMEUG00000007509	-	59	92.763	Notamacropus_eugenii
ENSPTRG00000016671	-	100	83.333	ENSOPRG00000004722	-	100	83.333	Ochotona_princeps
ENSPTRG00000016671	-	100	97.287	ENSODEG00000006458	-	100	97.287	Octodon_degus
ENSPTRG00000016671	-	100	77.974	ENSODEG00000006953	-	95	77.974	Octodon_degus
ENSPTRG00000016671	-	100	69.112	ENSONIG00000010162	frg1	100	69.884	Oreochromis_niloticus
ENSPTRG00000016671	-	70	90.625	ENSOANG00000005659	-	76	91.228	Ornithorhynchus_anatinus
ENSPTRG00000016671	-	100	97.674	ENSOCUG00000009038	-	100	97.674	Oryctolagus_cuniculus
ENSPTRG00000016671	-	96	69.636	ENSORLG00000008106	frg1	89	69.636	Oryzias_latipes
ENSPTRG00000016671	-	100	70.155	ENSORLG00020014355	frg1	100	70.155	Oryzias_latipes_hni
ENSPTRG00000016671	-	100	70.155	ENSORLG00015014159	frg1	100	70.155	Oryzias_latipes_hsok
ENSPTRG00000016671	-	84	69.585	ENSOMEG00000002468	frg1	88	69.585	Oryzias_melastigma
ENSPTRG00000016671	-	100	97.674	ENSOGAG00000005749	-	100	97.674	Otolemur_garnettii
ENSPTRG00000016671	-	100	96.169	ENSOARG00000008592	FRG1	100	96.169	Ovis_aries
ENSPTRG00000016671	-	100	68.110	ENSPPAG00000043174	-	100	70.930	Pan_paniscus
ENSPTRG00000016671	-	84	98.611	ENSPPAG00000043170	-	100	98.611	Pan_paniscus
ENSPTRG00000016671	-	100	96.124	ENSPPRG00000019777	-	100	96.124	Panthera_pardus
ENSPTRG00000016671	-	100	98.450	ENSPPRG00000025003	-	100	98.450	Panthera_pardus
ENSPTRG00000016671	-	100	98.062	ENSPTIG00000006588	-	100	98.062	Panthera_tigris_altaica
ENSPTRG00000016671	-	100	96.512	ENSPTIG00000006566	-	100	96.512	Panthera_tigris_altaica
ENSPTRG00000016671	-	70	89.444	ENSPANG00000031530	-	84	89.444	Papio_anubis
ENSPTRG00000016671	-	100	68.605	ENSPKIG00000024189	frg1	100	72.093	Paramormyrops_kingsleyae
ENSPTRG00000016671	-	93	83.491	ENSPSIG00000017971	-	82	87.500	Pelodiscus_sinensis
ENSPTRG00000016671	-	100	68.354	ENSPMGG00000019273	frg1	98	68.354	Periophthalmus_magnuspinnatus
ENSPTRG00000016671	-	100	97.287	ENSPEMG00000000650	Frg1	100	97.287	Peromyscus_maniculatus_bairdii
ENSPTRG00000016671	-	100	89.147	ENSPCIG00000007530	-	69	89.147	Phascolarctos_cinereus
ENSPTRG00000016671	-	100	70.270	ENSPFOG00000006721	frg1	100	70.270	Poecilia_formosa
ENSPTRG00000016671	-	100	67.442	ENSPMEG00000013816	frg1	100	67.442	Poecilia_mexicana
ENSPTRG00000016671	-	100	70.155	ENSPREG00000000097	frg1	100	67.054	Poecilia_reticulata
ENSPTRG00000016671	-	64	97.241	ENSPPYG00000029810	-	100	97.241	Pongo_abelii
ENSPTRG00000016671	-	70	91.772	ENSPPYG00000011275	-	87	91.772	Pongo_abelii
ENSPTRG00000016671	-	95	92.276	ENSPCAG00000014953	-	100	92.276	Procavia_capensis
ENSPTRG00000016671	-	100	67.829	ENSPCOG00000022726	FRG1	100	67.829	Propithecus_coquereli
ENSPTRG00000016671	-	100	83.721	ENSPVAG00000010551	FRG1	100	83.721	Pteropus_vampyrus
ENSPTRG00000016671	-	70	73.125	ENSPNYG00000015209	frg1	74	73.684	Pundamilia_nyererei
ENSPTRG00000016671	-	100	73.276	ENSPNAG00000013259	frg1	100	71.318	Pygocentrus_nattereri
ENSPTRG00000016671	-	100	95.736	ENSRNOG00000009846	Frg1	100	95.736	Rattus_norvegicus
ENSPTRG00000016671	-	87	98.222	ENSRBIG00000042219	-	94	98.222	Rhinopithecus_bieti
ENSPTRG00000016671	-	98	92.411	ENSRROG00000032084	-	93	92.411	Rhinopithecus_roxellana
ENSPTRG00000016671	-	100	96.124	ENSRROG00000015523	FRG1	100	96.124	Rhinopithecus_roxellana
ENSPTRG00000016671	-	100	98.062	ENSSBOG00000034175	FRG1	100	98.062	Saimiri_boliviensis_boliviensis
ENSPTRG00000016671	-	100	91.085	ENSSHAG00000005886	-	100	91.085	Sarcophilus_harrisii
ENSPTRG00000016671	-	97	70.800	ENSSFOG00015021361	frg1	99	73.600	Scleropages_formosus
ENSPTRG00000016671	-	100	68.605	ENSSMAG00000001213	frg1	100	68.992	Scophthalmus_maximus
ENSPTRG00000016671	-	100	69.767	ENSSDUG00000018886	frg1	100	70.543	Seriola_dumerili
ENSPTRG00000016671	-	100	69.767	ENSSLDG00000024191	frg1	100	69.767	Seriola_lalandi_dorsalis
ENSPTRG00000016671	-	73	95.745	ENSSARG00000002471	-	100	95.745	Sorex_araneus
ENSPTRG00000016671	-	100	79.070	ENSSPUG00000017326	-	96	83.333	Sphenodon_punctatus
ENSPTRG00000016671	-	100	67.829	ENSSPAG00000013294	frg1	100	67.442	Stegastes_partitus
ENSPTRG00000016671	-	100	98.837	ENSSSCG00000006996	FRG1	100	98.837	Sus_scrofa
ENSPTRG00000016671	-	54	90.244	ENSTGUG00000016714	-	100	90.244	Taeniopygia_guttata
ENSPTRG00000016671	-	100	83.721	ENSTGUG00000007028	-	100	83.333	Taeniopygia_guttata
ENSPTRG00000016671	-	100	70.543	ENSTRUG00000016208	frg1	100	70.543	Takifugu_rubripes
ENSPTRG00000016671	-	100	68.992	ENSTNIG00000007128	frg1	100	69.767	Tetraodon_nigroviridis
ENSPTRG00000016671	-	100	96.512	ENSTBEG00000014491	-	100	96.512	Tupaia_belangeri
ENSPTRG00000016671	-	87	61.809	ENSTBEG00000017605	-	99	61.809	Tupaia_belangeri
ENSPTRG00000016671	-	88	66.832	ENSTBEG00000012789	-	100	68.545	Tupaia_belangeri
ENSPTRG00000016671	-	100	98.062	ENSTTRG00000003429	FRG1	100	98.062	Tursiops_truncatus
ENSPTRG00000016671	-	100	90.756	ENSUAMG00000012123	-	100	90.756	Ursus_americanus
ENSPTRG00000016671	-	100	98.837	ENSUMAG00000021119	FRG1	100	98.837	Ursus_maritimus
ENSPTRG00000016671	-	100	95.736	ENSVPAG00000000616	FRG1	100	95.736	Vicugna_pacos
ENSPTRG00000016671	-	92	98.312	ENSVPAG00000011977	-	100	98.312	Vicugna_pacos
ENSPTRG00000016671	-	89	99.507	ENSVVUG00000007181	-	77	99.531	Vulpes_vulpes
ENSPTRG00000016671	-	100	80.233	ENSXETG00000012470	frg1	100	79.457	Xenopus_tropicalis
ENSPTRG00000016671	-	100	64.341	ENSXCOG00000005312	frg1	100	64.341	Xiphophorus_couchianus
ENSPTRG00000016671	-	100	66.667	ENSXMAG00000007751	frg1	100	66.667	Xiphophorus_maculatus