EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPTRG00000016878 (Gene tree)
Gene ID: 461870
Gene Symbol: MTREX
Alias: -
Full Name: Mtr4 exosome RNA helicase
Gene Type: protein_coding
Species: Pan_troglodytes
Status: putative
Strand: Minus strand
Length: 117998 bases
Position: chr5:59212125-59330122
Accession: 14452
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTRP00000028912	rRNA_proc-arch	PF13234.6	3.4e-87	1	1
ENSPTRP00000062078	rRNA_proc-arch	PF13234.6	1.4e-69	1	1
ENSPTRP00000062078	DEAD	PF00270.29	7.5e-17	1	1
ENSPTRP00000028912	DEAD	PF00270.29	7.7e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTRT00000080089	-	3099	-	ENSPTRP00000062078	1032 (aa)	-	A0A2I3RBT6
ENSPTRT00000031303	-	4203	XM_001145794	ENSPTRP00000028912	1042 (aa)	XP_001145794	H2QQX1

Gene Model

Click here to download ENSPTRG00000016878's gene model file

Pathways

Pathway ID	Pathway Name	Source
ptr03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000016878's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPTRG00000016878	MTREX	91	36.561	ENSPTRG00000017997	SKIV2L	86	36.561

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTRG00000016878	MTREX	100	99.808	ENSG00000039123	MTREX	100	99.808	Homo_sapiens
ENSPTRG00000016878	MTREX	100	83.143	ENSAPOG00000007814	mtrex	100	83.111	Acanthochromis_polyacanthus
ENSPTRG00000016878	MTREX	100	98.562	ENSAMEG00000013856	MTREX	100	98.562	Ailuropoda_melanoleuca
ENSPTRG00000016878	MTREX	91	87.879	ENSACIG00000015117	mtrex	96	87.879	Amphilophus_citrinellus
ENSPTRG00000016878	MTREX	100	83.143	ENSAOCG00000011884	mtrex	100	83.143	Amphiprion_ocellaris
ENSPTRG00000016878	MTREX	100	83.048	ENSAPEG00000019384	mtrex	100	83.048	Amphiprion_percula
ENSPTRG00000016878	MTREX	100	83.794	ENSATEG00000015117	mtrex	100	83.794	Anabas_testudineus
ENSPTRG00000016878	MTREX	95	92.821	ENSAPLG00000009694	MTREX	99	92.821	Anas_platyrhynchos
ENSPTRG00000016878	MTREX	100	90.979	ENSACAG00000015200	MTREX	96	90.787	Anolis_carolinensis
ENSPTRG00000016878	MTREX	100	99.232	ENSANAG00000023095	MTREX	100	99.232	Aotus_nancymaae
ENSPTRG00000016878	MTREX	100	82.459	ENSACLG00000001921	mtrex	100	82.634	Astatotilapia_calliptera
ENSPTRG00000016878	MTREX	97	81.729	ENSAMXG00000018751	mtrex	99	83.936	Astyanax_mexicanus
ENSPTRG00000016878	MTREX	100	98.560	ENSBTAG00000010518	MTREX	100	98.560	Bos_taurus
ENSPTRG00000016878	MTREX	91	53.733	WBGene00012342	mtr-4	95	53.055	Caenorhabditis_elegans
ENSPTRG00000016878	MTREX	100	98.092	ENSCJAG00000001773	MTREX	100	98.092	Callithrix_jacchus
ENSPTRG00000016878	MTREX	100	98.848	ENSCAFG00000006818	MTREX	100	98.848	Canis_familiaris
ENSPTRG00000016878	MTREX	100	98.848	ENSCAFG00020024352	MTREX	100	98.848	Canis_lupus_dingo
ENSPTRG00000016878	MTREX	100	98.560	ENSCHIG00000024413	MTREX	100	98.560	Capra_hircus
ENSPTRG00000016878	MTREX	94	98.205	ENSTSYG00000007389	MTREX	100	98.205	Carlito_syrichta
ENSPTRG00000016878	MTREX	96	73.848	ENSCAPG00000008696	MTREX	100	73.848	Cavia_aperea
ENSPTRG00000016878	MTREX	100	98.081	ENSCPOG00000009797	MTREX	100	98.081	Cavia_porcellus
ENSPTRG00000016878	MTREX	100	99.136	ENSCCAG00000014177	MTREX	100	99.136	Cebus_capucinus
ENSPTRG00000016878	MTREX	100	99.520	ENSCATG00000042153	MTREX	100	99.520	Cercocebus_atys
ENSPTRG00000016878	MTREX	100	98.177	ENSCLAG00000006622	MTREX	100	98.177	Chinchilla_lanigera
ENSPTRG00000016878	MTREX	100	94.928	ENSCSAG00000016445	MTREX	100	94.928	Chlorocebus_sabaeus
ENSPTRG00000016878	MTREX	70	98.611	ENSCHOG00000010936	-	70	98.611	Choloepus_hoffmanni
ENSPTRG00000016878	MTREX	100	91.755	ENSCPBG00000026551	MTREX	94	92.042	Chrysemys_picta_bellii
ENSPTRG00000016878	MTREX	99	66.444	ENSCING00000003239	-	99	66.252	Ciona_intestinalis
ENSPTRG00000016878	MTREX	99	65.396	ENSCSAVG00000009304	-	100	70.108	Ciona_savignyi
ENSPTRG00000016878	MTREX	100	99.424	ENSCANG00000035770	MTREX	100	99.424	Colobus_angolensis_palliatus
ENSPTRG00000016878	MTREX	100	97.889	ENSCGRG00001024680	Mtrex	100	97.889	Cricetulus_griseus_chok1gshd
ENSPTRG00000016878	MTREX	100	97.889	ENSCGRG00000000307	Mtrex	100	97.889	Cricetulus_griseus_crigri
ENSPTRG00000016878	MTREX	100	81.853	ENSCSEG00000018621	mtrex	98	81.853	Cynoglossus_semilaevis
ENSPTRG00000016878	MTREX	100	83.477	ENSCVAG00000004556	mtrex	100	83.572	Cyprinodon_variegatus
ENSPTRG00000016878	MTREX	100	84.909	ENSDARG00000013457	mtrex	100	84.681	Danio_rerio
ENSPTRG00000016878	MTREX	100	97.132	ENSDNOG00000015375	MTREX	100	97.132	Dasypus_novemcinctus
ENSPTRG00000016878	MTREX	100	98.177	ENSDORG00000006782	Mtrex	100	98.177	Dipodomys_ordii
ENSPTRG00000016878	MTREX	92	66.701	FBgn0001986	Mtr4	92	65.988	Drosophila_melanogaster
ENSPTRG00000016878	MTREX	91	80.468	ENSETEG00000000727	MTREX	90	80.468	Echinops_telfairi
ENSPTRG00000016878	MTREX	99	74.206	ENSEBUG00000012869	mtrex	99	74.206	Eptatretus_burgeri
ENSPTRG00000016878	MTREX	100	98.081	ENSEASG00005013270	MTREX	100	98.081	Equus_asinus_asinus
ENSPTRG00000016878	MTREX	100	98.177	ENSECAG00000023723	MTREX	100	99.537	Equus_caballus
ENSPTRG00000016878	MTREX	98	88.488	ENSEEUG00000000527	MTREX	100	88.488	Erinaceus_europaeus
ENSPTRG00000016878	MTREX	98	85.063	ENSELUG00000004898	mtrex	100	89.496	Esox_lucius
ENSPTRG00000016878	MTREX	100	98.464	ENSFCAG00000010575	MTREX	100	98.464	Felis_catus
ENSPTRG00000016878	MTREX	100	90.019	ENSFALG00000010850	MTREX	100	89.923	Ficedula_albicollis
ENSPTRG00000016878	MTREX	100	98.081	ENSFDAG00000011199	MTREX	100	98.081	Fukomys_damarensis
ENSPTRG00000016878	MTREX	100	83.603	ENSFHEG00000023014	mtrex	100	82.319	Fundulus_heteroclitus
ENSPTRG00000016878	MTREX	100	79.771	ENSGMOG00000014702	mtrex	100	79.771	Gadus_morhua
ENSPTRG00000016878	MTREX	100	91.075	ENSGALG00000014709	MTREX	86	91.075	Gallus_gallus
ENSPTRG00000016878	MTREX	100	83.508	ENSGAFG00000012425	mtrex	98	87.397	Gambusia_affinis
ENSPTRG00000016878	MTREX	100	79.123	ENSGACG00000016260	mtrex	96	85.217	Gasterosteus_aculeatus
ENSPTRG00000016878	MTREX	100	91.850	ENSGAGG00000020036	MTREX	100	91.467	Gopherus_agassizii
ENSPTRG00000016878	MTREX	100	99.904	ENSGGOG00000001867	MTREX	100	99.904	Gorilla_gorilla
ENSPTRG00000016878	MTREX	100	82.459	ENSHBUG00000006229	mtrex	100	82.634	Haplochromis_burtoni
ENSPTRG00000016878	MTREX	100	98.177	ENSHGLG00000019445	SKIV2L2	100	98.177	Heterocephalus_glaber_female
ENSPTRG00000016878	MTREX	100	98.177	ENSHGLG00100011833	SKIV2L2	100	98.177	Heterocephalus_glaber_male
ENSPTRG00000016878	MTREX	91	84.929	ENSHCOG00000019995	mtrex	100	84.929	Hippocampus_comes
ENSPTRG00000016878	MTREX	100	85.100	ENSIPUG00000024348	skiv2l2	100	84.924	Ictalurus_punctatus
ENSPTRG00000016878	MTREX	100	98.656	ENSSTOG00000010802	MTREX	100	98.656	Ictidomys_tridecemlineatus
ENSPTRG00000016878	MTREX	100	90.499	ENSJJAG00000020975	Mtrex	100	91.171	Jaculus_jaculus
ENSPTRG00000016878	MTREX	100	82.745	ENSKMAG00000012642	mtrex	100	82.650	Kryptolebias_marmoratus
ENSPTRG00000016878	MTREX	100	83.333	ENSLBEG00000019367	mtrex	99	86.236	Labrus_bergylta
ENSPTRG00000016878	MTREX	100	88.506	ENSLACG00000009075	MTREX	100	88.061	Latimeria_chalumnae
ENSPTRG00000016878	MTREX	100	87.452	ENSLOCG00000010186	mtrex	100	87.069	Lepisosteus_oculatus
ENSPTRG00000016878	MTREX	99	96.161	ENSLAFG00000010497	MTREX	100	96.161	Loxodonta_africana
ENSPTRG00000016878	MTREX	100	99.520	ENSMFAG00000031610	MTREX	100	99.520	Macaca_fascicularis
ENSPTRG00000016878	MTREX	100	97.989	ENSMMUG00000010379	MTREX	100	97.989	Macaca_mulatta
ENSPTRG00000016878	MTREX	100	99.520	ENSMNEG00000032746	MTREX	100	99.520	Macaca_nemestrina
ENSPTRG00000016878	MTREX	100	99.520	ENSMLEG00000041051	MTREX	100	99.520	Mandrillus_leucophaeus
ENSPTRG00000016878	MTREX	95	86.072	ENSMAMG00000016753	mtrex	96	88.413	Mastacembelus_armatus
ENSPTRG00000016878	MTREX	100	82.459	ENSMZEG00005000414	mtrex	100	82.634	Maylandia_zebra
ENSPTRG00000016878	MTREX	94	67.510	ENSMGAG00000003980	MTREX	99	67.510	Meleagris_gallopavo
ENSPTRG00000016878	MTREX	100	97.793	ENSMAUG00000010727	Mtrex	100	97.793	Mesocricetus_auratus
ENSPTRG00000016878	MTREX	100	99.328	ENSMICG00000012779	MTREX	100	99.328	Microcebus_murinus
ENSPTRG00000016878	MTREX	100	97.697	ENSMOCG00000019886	Mtrex	100	97.697	Microtus_ochrogaster
ENSPTRG00000016878	MTREX	100	81.679	ENSMMOG00000002476	mtrex	100	81.966	Mola_mola
ENSPTRG00000016878	MTREX	100	93.090	ENSMODG00000019494	MTREX	100	93.474	Monodelphis_domestica
ENSPTRG00000016878	MTREX	92	82.497	ENSMALG00000002917	mtrex	99	82.497	Monopterus_albus
ENSPTRG00000016878	MTREX	100	97.217	MGP_CAROLIEiJ_G0018896	Mtrex	100	97.217	Mus_caroli
ENSPTRG00000016878	MTREX	100	97.505	ENSMUSG00000016018	Mtrex	100	97.505	Mus_musculus
ENSPTRG00000016878	MTREX	100	97.409	MGP_PahariEiJ_G0015967	Mtrex	100	97.409	Mus_pahari
ENSPTRG00000016878	MTREX	100	97.505	MGP_SPRETEiJ_G0019775	Mtrex	100	97.505	Mus_spretus
ENSPTRG00000016878	MTREX	100	98.848	ENSMPUG00000007619	MTREX	100	98.848	Mustela_putorius_furo
ENSPTRG00000016878	MTREX	100	97.033	ENSMLUG00000001152	MTREX	100	97.033	Myotis_lucifugus
ENSPTRG00000016878	MTREX	100	98.273	ENSNGAG00000011938	Mtrex	100	98.273	Nannospalax_galili
ENSPTRG00000016878	MTREX	100	82.555	ENSNBRG00000011293	mtrex	100	82.729	Neolamprologus_brichardi
ENSPTRG00000016878	MTREX	100	95.881	ENSNLEG00000001494	MTREX	100	95.881	Nomascus_leucogenys
ENSPTRG00000016878	MTREX	83	100.000	ENSMEUG00000006496	-	83	100.000	Notamacropus_eugenii
ENSPTRG00000016878	MTREX	100	83.013	ENSOPRG00000008009	MTREX	100	83.013	Ochotona_princeps
ENSPTRG00000016878	MTREX	100	97.505	ENSODEG00000017234	MTREX	100	97.505	Octodon_degus
ENSPTRG00000016878	MTREX	100	82.364	ENSONIG00000007587	mtrex	100	82.538	Oreochromis_niloticus
ENSPTRG00000016878	MTREX	100	98.752	ENSOCUG00000004463	MTREX	100	98.752	Oryctolagus_cuniculus
ENSPTRG00000016878	MTREX	100	82.555	ENSORLG00000005443	mtrex	100	82.364	Oryzias_latipes
ENSPTRG00000016878	MTREX	100	82.459	ENSORLG00020006329	mtrex	100	82.269	Oryzias_latipes_hni
ENSPTRG00000016878	MTREX	100	82.555	ENSORLG00015012924	mtrex	100	82.414	Oryzias_latipes_hsok
ENSPTRG00000016878	MTREX	100	81.844	ENSOMEG00000008825	mtrex	100	81.654	Oryzias_melastigma
ENSPTRG00000016878	MTREX	100	98.848	ENSOGAG00000002886	MTREX	100	98.848	Otolemur_garnettii
ENSPTRG00000016878	MTREX	100	98.278	ENSOARG00000007764	MTREX	100	98.278	Ovis_aries
ENSPTRG00000016878	MTREX	100	100.000	ENSPPAG00000039291	MTREX	100	100.000	Pan_paniscus
ENSPTRG00000016878	MTREX	100	98.464	ENSPPRG00000019701	MTREX	100	98.464	Panthera_pardus
ENSPTRG00000016878	MTREX	100	96.929	ENSPTIG00000009313	MTREX	100	96.929	Panthera_tigris_altaica
ENSPTRG00000016878	MTREX	100	99.424	ENSPANG00000009697	MTREX	100	99.424	Papio_anubis
ENSPTRG00000016878	MTREX	100	87.106	ENSPKIG00000020833	mtrex	98	88.774	Paramormyrops_kingsleyae
ENSPTRG00000016878	MTREX	100	91.850	ENSPSIG00000012150	MTREX	100	91.850	Pelodiscus_sinensis
ENSPTRG00000016878	MTREX	100	81.125	ENSPMGG00000002582	mtrex	100	81.125	Periophthalmus_magnuspinnatus
ENSPTRG00000016878	MTREX	95	65.462	ENSPMAG00000009668	mtrex	100	65.161	Petromyzon_marinus
ENSPTRG00000016878	MTREX	91	96.727	ENSPCIG00000024730	MTREX	100	96.727	Phascolarctos_cinereus
ENSPTRG00000016878	MTREX	75	87.199	ENSPFOG00000003141	mtrex	100	87.437	Poecilia_formosa
ENSPTRG00000016878	MTREX	100	83.572	ENSPLAG00000021311	mtrex	100	83.508	Poecilia_latipinna
ENSPTRG00000016878	MTREX	91	87.513	ENSPMEG00000010597	mtrex	99	87.828	Poecilia_mexicana
ENSPTRG00000016878	MTREX	100	83.222	ENSPREG00000003089	mtrex	100	83.317	Poecilia_reticulata
ENSPTRG00000016878	MTREX	98	99.902	ENSPPYG00000015469	MTREX	98	99.902	Pongo_abelii
ENSPTRG00000016878	MTREX	94	83.256	ENSPCAG00000013120	MTREX	94	83.256	Procavia_capensis
ENSPTRG00000016878	MTREX	99	93.165	ENSPCOG00000018092	MTREX	100	93.060	Propithecus_coquereli
ENSPTRG00000016878	MTREX	100	98.656	ENSPVAG00000002445	MTREX	100	98.656	Pteropus_vampyrus
ENSPTRG00000016878	MTREX	100	82.364	ENSPNYG00000006164	mtrex	100	82.538	Pundamilia_nyererei
ENSPTRG00000016878	MTREX	100	86.151	ENSPNAG00000008794	mtrex	100	86.151	Pygocentrus_nattereri
ENSPTRG00000016878	MTREX	99	97.376	ENSRNOG00000010125	Mtrex	97	97.376	Rattus_norvegicus
ENSPTRG00000016878	MTREX	100	97.793	ENSRBIG00000034930	MTREX	100	97.793	Rhinopithecus_bieti
ENSPTRG00000016878	MTREX	100	99.520	ENSRROG00000039895	MTREX	100	99.520	Rhinopithecus_roxellana
ENSPTRG00000016878	MTREX	89	55.556	YJL050W	MTR4	89	55.556	Saccharomyces_cerevisiae
ENSPTRG00000016878	MTREX	100	99.040	ENSSBOG00000026693	MTREX	100	99.040	Saimiri_boliviensis_boliviensis
ENSPTRG00000016878	MTREX	96	95.386	ENSSHAG00000004600	MTREX	100	95.386	Sarcophilus_harrisii
ENSPTRG00000016878	MTREX	100	87.476	ENSSFOG00015014355	skiv2l2	100	87.380	Scleropages_formosus
ENSPTRG00000016878	MTREX	100	82.762	ENSSMAG00000007572	mtrex	100	82.650	Scophthalmus_maximus
ENSPTRG00000016878	MTREX	100	83.492	ENSSDUG00000023789	mtrex	100	83.492	Seriola_dumerili
ENSPTRG00000016878	MTREX	100	83.397	ENSSLDG00000006301	mtrex	100	83.302	Seriola_lalandi_dorsalis
ENSPTRG00000016878	MTREX	100	94.626	ENSSARG00000008387	MTREX	100	94.626	Sorex_araneus
ENSPTRG00000016878	MTREX	100	79.674	ENSSPUG00000007071	MTREX	100	79.770	Sphenodon_punctatus
ENSPTRG00000016878	MTREX	91	87.408	ENSSPAG00000011319	mtrex	94	87.828	Stegastes_partitus
ENSPTRG00000016878	MTREX	100	98.848	ENSSSCG00000016911	MTREX	100	98.848	Sus_scrofa
ENSPTRG00000016878	MTREX	100	89.837	ENSTGUG00000002480	MTREX	100	89.837	Taeniopygia_guttata
ENSPTRG00000016878	MTREX	100	82.952	ENSTRUG00000014571	mtrex	100	82.873	Takifugu_rubripes
ENSPTRG00000016878	MTREX	100	82.630	ENSTBEG00000007769	MTREX	100	82.630	Tupaia_belangeri
ENSPTRG00000016878	MTREX	100	98.464	ENSTTRG00000008678	MTREX	100	98.464	Tursiops_truncatus
ENSPTRG00000016878	MTREX	100	98.656	ENSUAMG00000023061	MTREX	100	98.656	Ursus_americanus
ENSPTRG00000016878	MTREX	100	97.989	ENSUMAG00000009373	MTREX	99	99.885	Ursus_maritimus
ENSPTRG00000016878	MTREX	100	87.524	ENSVPAG00000011174	MTREX	100	87.524	Vicugna_pacos
ENSPTRG00000016878	MTREX	100	98.848	ENSVVUG00000021337	MTREX	100	98.848	Vulpes_vulpes
ENSPTRG00000016878	MTREX	100	88.303	ENSXETG00000032798	MTREX	100	88.303	Xenopus_tropicalis
ENSPTRG00000016878	MTREX	100	83.222	ENSXMAG00000004799	mtrex	97	87.474	Xiphophorus_maculatus