EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPTRG00000016968 (Gene tree)
Gene ID: 461820
Gene Symbol: PTCD2
Alias: -
Full Name: pentatricopeptide repeat domain 2
Gene Type: protein_coding
Species: Pan_troglodytes
Status: putative
Strand: Minus strand
Length: 38577 bases
Position: chr5:43527933-43566509
Accession: 4138
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTRP00000029067	MRP-S27	PF10037.9	5e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTRT00000031471	-	1957	XM_009448933	ENSPTRP00000029067	388 (aa)	XP_009447208	H2QR19
ENSPTRT00000087221	-	651	-	ENSPTRP00000069203	216 (aa)	-	A0A2I3RX54
ENSPTRT00000083822	-	1894	-	ENSPTRP00000070337	93 (aa)	-	A0A2I3S065
ENSPTRT00000082133	-	840	-	ENSPTRP00000071776	279 (aa)	-	A0A2I3S4L3

Gene Model

Click here to download ENSPTRG00000016968's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000016968's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTRG00000016968	PTCD2	100	99.227	ENSG00000049883	PTCD2	100	99.227	Homo_sapiens
ENSPTRG00000016968	PTCD2	96	45.600	ENSAPOG00000020682	ptcd2	97	45.600	Acanthochromis_polyacanthus
ENSPTRG00000016968	PTCD2	99	78.182	ENSAMEG00000007194	PTCD2	99	78.182	Ailuropoda_melanoleuca
ENSPTRG00000016968	PTCD2	89	40.688	ENSACIG00000002053	ptcd2	100	40.688	Amphilophus_citrinellus
ENSPTRG00000016968	PTCD2	94	45.205	ENSAOCG00000006616	ptcd2	93	45.205	Amphiprion_ocellaris
ENSPTRG00000016968	PTCD2	94	45.205	ENSAPEG00000022926	ptcd2	93	45.205	Amphiprion_percula
ENSPTRG00000016968	PTCD2	98	55.643	ENSACAG00000009747	PTCD2	97	55.643	Anolis_carolinensis
ENSPTRG00000016968	PTCD2	100	86.856	ENSANAG00000029353	PTCD2	100	86.856	Aotus_nancymaae
ENSPTRG00000016968	PTCD2	98	41.953	ENSACLG00000027742	ptcd2	95	41.953	Astatotilapia_calliptera
ENSPTRG00000016968	PTCD2	85	44.242	ENSAMXG00000029404	ptcd2	88	44.242	Astyanax_mexicanus
ENSPTRG00000016968	PTCD2	99	80.990	ENSBTAG00000014675	PTCD2	100	80.990	Bos_taurus
ENSPTRG00000016968	PTCD2	100	87.371	ENSCJAG00000016364	PTCD2	100	87.371	Callithrix_jacchus
ENSPTRG00000016968	PTCD2	99	76.364	ENSCAFG00000007982	PTCD2	90	76.364	Canis_familiaris
ENSPTRG00000016968	PTCD2	89	78.324	ENSCAFG00020019147	PTCD2	97	78.324	Canis_lupus_dingo
ENSPTRG00000016968	PTCD2	99	82.031	ENSCHIG00000017118	PTCD2	100	82.031	Capra_hircus
ENSPTRG00000016968	PTCD2	99	74.413	ENSCPOG00000040168	PTCD2	100	74.413	Cavia_porcellus
ENSPTRG00000016968	PTCD2	100	87.113	ENSCCAG00000029389	-	100	87.113	Cebus_capucinus
ENSPTRG00000016968	PTCD2	81	83.067	ENSCCAG00000021996	-	98	80.878	Cebus_capucinus
ENSPTRG00000016968	PTCD2	99	90.862	ENSCATG00000019069	PTCD2	100	90.862	Cercocebus_atys
ENSPTRG00000016968	PTCD2	99	74.935	ENSCLAG00000000072	PTCD2	100	74.935	Chinchilla_lanigera
ENSPTRG00000016968	PTCD2	99	91.123	ENSCSAG00000015623	PTCD2	100	91.123	Chlorocebus_sabaeus
ENSPTRG00000016968	PTCD2	89	60.345	ENSCHOG00000010634	PTCD2	100	60.345	Choloepus_hoffmanni
ENSPTRG00000016968	PTCD2	100	54.082	ENSCPBG00000000216	PTCD2	100	54.082	Chrysemys_picta_bellii
ENSPTRG00000016968	PTCD2	100	89.948	ENSCANG00000035636	PTCD2	100	89.948	Colobus_angolensis_palliatus
ENSPTRG00000016968	PTCD2	99	74.352	ENSCGRG00001015289	Ptcd2	84	74.352	Cricetulus_griseus_chok1gshd
ENSPTRG00000016968	PTCD2	99	74.352	ENSCGRG00000006193	Ptcd2	84	74.352	Cricetulus_griseus_crigri
ENSPTRG00000016968	PTCD2	90	45.115	ENSCVAG00000001285	ptcd2	89	45.115	Cyprinodon_variegatus
ENSPTRG00000016968	PTCD2	92	45.278	ENSDARG00000035391	ptcd2	94	45.278	Danio_rerio
ENSPTRG00000016968	PTCD2	99	77.023	ENSDNOG00000008719	PTCD2	100	77.023	Dasypus_novemcinctus
ENSPTRG00000016968	PTCD2	99	77.778	ENSDORG00000004921	Ptcd2	100	77.778	Dipodomys_ordii
ENSPTRG00000016968	PTCD2	99	69.845	ENSETEG00000016542	PTCD2	99	69.845	Echinops_telfairi
ENSPTRG00000016968	PTCD2	99	78.851	ENSEASG00005018038	PTCD2	100	78.851	Equus_asinus_asinus
ENSPTRG00000016968	PTCD2	99	78.906	ENSECAG00000007022	PTCD2	99	78.906	Equus_caballus
ENSPTRG00000016968	PTCD2	99	72.396	ENSEEUG00000014031	PTCD2	99	72.396	Erinaceus_europaeus
ENSPTRG00000016968	PTCD2	90	50.712	ENSELUG00000003584	ptcd2	91	50.712	Esox_lucius
ENSPTRG00000016968	PTCD2	99	73.385	ENSFCAG00000045432	PTCD2	83	73.385	Felis_catus
ENSPTRG00000016968	PTCD2	84	51.070	ENSFALG00000010299	PTCD2	99	51.070	Ficedula_albicollis
ENSPTRG00000016968	PTCD2	99	77.546	ENSFDAG00000018461	PTCD2	100	77.546	Fukomys_damarensis
ENSPTRG00000016968	PTCD2	90	50.712	ENSGMOG00000003637	ptcd2	91	50.712	Gadus_morhua
ENSPTRG00000016968	PTCD2	90	50.857	ENSGALG00000038260	PTCD2	92	50.857	Gallus_gallus
ENSPTRG00000016968	PTCD2	100	57.143	ENSGAGG00000021952	PTCD2	100	57.143	Gopherus_agassizii
ENSPTRG00000016968	PTCD2	100	99.485	ENSGGOG00000010695	PTCD2	100	99.485	Gorilla_gorilla
ENSPTRG00000016968	PTCD2	98	42.216	ENSHBUG00000009191	ptcd2	95	42.216	Haplochromis_burtoni
ENSPTRG00000016968	PTCD2	99	75.457	ENSHGLG00000001234	PTCD2	100	75.457	Heterocephalus_glaber_female
ENSPTRG00000016968	PTCD2	99	75.457	ENSHGLG00100015419	PTCD2	100	75.457	Heterocephalus_glaber_male
ENSPTRG00000016968	PTCD2	97	46.154	ENSHCOG00000001703	ptcd2	95	46.154	Hippocampus_comes
ENSPTRG00000016968	PTCD2	84	44.444	ENSIPUG00000006080	ptcd2	90	44.220	Ictalurus_punctatus
ENSPTRG00000016968	PTCD2	98	80.366	ENSSTOG00000006596	PTCD2	99	80.366	Ictidomys_tridecemlineatus
ENSPTRG00000016968	PTCD2	99	77.546	ENSJJAG00000024388	Ptcd2	100	77.546	Jaculus_jaculus
ENSPTRG00000016968	PTCD2	96	41.979	ENSKMAG00000009329	ptcd2	97	41.979	Kryptolebias_marmoratus
ENSPTRG00000016968	PTCD2	89	45.665	ENSLBEG00000024871	ptcd2	88	45.665	Labrus_bergylta
ENSPTRG00000016968	PTCD2	94	54.945	ENSLOCG00000011122	ptcd2	94	54.945	Lepisosteus_oculatus
ENSPTRG00000016968	PTCD2	80	77.492	ENSLAFG00000004115	PTCD2	100	77.492	Loxodonta_africana
ENSPTRG00000016968	PTCD2	100	90.722	ENSMFAG00000031516	PTCD2	100	90.722	Macaca_fascicularis
ENSPTRG00000016968	PTCD2	99	90.862	ENSMNEG00000007537	PTCD2	100	90.862	Macaca_nemestrina
ENSPTRG00000016968	PTCD2	100	90.722	ENSMLEG00000031093	PTCD2	100	90.722	Mandrillus_leucophaeus
ENSPTRG00000016968	PTCD2	94	46.649	ENSMAMG00000018529	ptcd2	97	46.649	Mastacembelus_armatus
ENSPTRG00000016968	PTCD2	98	41.953	ENSMZEG00005003625	ptcd2	95	41.953	Maylandia_zebra
ENSPTRG00000016968	PTCD2	90	51.437	ENSMGAG00000005033	PTCD2	100	51.437	Meleagris_gallopavo
ENSPTRG00000016968	PTCD2	99	54.047	ENSMAUG00000020253	Ptcd2	100	54.569	Mesocricetus_auratus
ENSPTRG00000016968	PTCD2	99	81.137	ENSMICG00000004535	PTCD2	99	81.137	Microcebus_murinus
ENSPTRG00000016968	PTCD2	99	73.368	ENSMOCG00000019985	Ptcd2	100	73.368	Microtus_ochrogaster
ENSPTRG00000016968	PTCD2	99	57.031	ENSMODG00000001695	PTCD2	100	57.031	Monodelphis_domestica
ENSPTRG00000016968	PTCD2	94	47.541	ENSMALG00000022372	ptcd2	94	47.541	Monopterus_albus
ENSPTRG00000016968	PTCD2	99	74.151	MGP_CAROLIEiJ_G0018829	Ptcd2	100	74.151	Mus_caroli
ENSPTRG00000016968	PTCD2	99	73.368	ENSMUSG00000021650	Ptcd2	100	73.368	Mus_musculus
ENSPTRG00000016968	PTCD2	99	76.240	MGP_PahariEiJ_G0015904	Ptcd2	100	76.240	Mus_pahari
ENSPTRG00000016968	PTCD2	99	73.890	MGP_SPRETEiJ_G0019711	Ptcd2	100	73.890	Mus_spretus
ENSPTRG00000016968	PTCD2	99	79.112	ENSMPUG00000014401	PTCD2	100	79.112	Mustela_putorius_furo
ENSPTRG00000016968	PTCD2	99	78.238	ENSMLUG00000007374	PTCD2	99	78.238	Myotis_lucifugus
ENSPTRG00000016968	PTCD2	99	74.151	ENSNGAG00000005027	Ptcd2	100	74.151	Nannospalax_galili
ENSPTRG00000016968	PTCD2	85	42.727	ENSNBRG00000000092	-	100	42.727	Neolamprologus_brichardi
ENSPTRG00000016968	PTCD2	98	42.216	ENSNBRG00000008174	ptcd2	96	42.216	Neolamprologus_brichardi
ENSPTRG00000016968	PTCD2	100	95.876	ENSNLEG00000004516	PTCD2	100	95.876	Nomascus_leucogenys
ENSPTRG00000016968	PTCD2	99	45.995	ENSMEUG00000014012	-	99	45.995	Notamacropus_eugenii
ENSPTRG00000016968	PTCD2	99	74.677	ENSOPRG00000007290	PTCD2	99	74.677	Ochotona_princeps
ENSPTRG00000016968	PTCD2	99	76.762	ENSODEG00000016417	PTCD2	100	76.762	Octodon_degus
ENSPTRG00000016968	PTCD2	82	43.750	ENSONIG00000011269	ptcd2	91	43.750	Oreochromis_niloticus
ENSPTRG00000016968	PTCD2	94	79.945	ENSOCUG00000007970	PTCD2	100	78.590	Oryctolagus_cuniculus
ENSPTRG00000016968	PTCD2	94	45.330	ENSORLG00000003851	ptcd2	92	45.330	Oryzias_latipes
ENSPTRG00000016968	PTCD2	94	44.780	ENSORLG00020009823	ptcd2	94	44.780	Oryzias_latipes_hni
ENSPTRG00000016968	PTCD2	89	45.954	ENSORLG00015016777	ptcd2	99	45.954	Oryzias_latipes_hsok
ENSPTRG00000016968	PTCD2	93	43.923	ENSOMEG00000012396	ptcd2	87	43.923	Oryzias_melastigma
ENSPTRG00000016968	PTCD2	99	76.227	ENSOGAG00000008390	PTCD2	99	76.227	Otolemur_garnettii
ENSPTRG00000016968	PTCD2	99	81.654	ENSOARG00000005087	PTCD2	99	81.654	Ovis_aries
ENSPTRG00000016968	PTCD2	100	99.227	ENSPPAG00000028480	PTCD2	100	99.227	Pan_paniscus
ENSPTRG00000016968	PTCD2	89	91.304	ENSPANG00000006611	PTCD2	89	91.304	Papio_anubis
ENSPTRG00000016968	PTCD2	90	46.742	ENSPKIG00000019896	ptcd2	92	46.742	Paramormyrops_kingsleyae
ENSPTRG00000016968	PTCD2	83	58.696	ENSPSIG00000014559	PTCD2	99	58.696	Pelodiscus_sinensis
ENSPTRG00000016968	PTCD2	99	73.506	ENSPEMG00000000884	Ptcd2	100	73.506	Peromyscus_maniculatus_bairdii
ENSPTRG00000016968	PTCD2	99	59.126	ENSPCIG00000029047	PTCD2	100	59.896	Phascolarctos_cinereus
ENSPTRG00000016968	PTCD2	90	43.966	ENSPLAG00000010456	ptcd2	91	43.966	Poecilia_latipinna
ENSPTRG00000016968	PTCD2	90	43.966	ENSPREG00000021797	ptcd2	88	43.966	Poecilia_reticulata
ENSPTRG00000016968	PTCD2	99	83.204	ENSPPYG00000015543	PTCD2	99	83.204	Pongo_abelii
ENSPTRG00000016968	PTCD2	80	67.308	ENSPCAG00000006806	PTCD2	99	67.308	Procavia_capensis
ENSPTRG00000016968	PTCD2	99	76.425	ENSPVAG00000010935	PTCD2	99	76.425	Pteropus_vampyrus
ENSPTRG00000016968	PTCD2	98	41.953	ENSPNYG00000003122	ptcd2	95	41.953	Pundamilia_nyererei
ENSPTRG00000016968	PTCD2	96	47.215	ENSPNAG00000021490	ptcd2	97	47.215	Pygocentrus_nattereri
ENSPTRG00000016968	PTCD2	99	73.890	ENSRNOG00000028403	Ptcd2	100	73.890	Rattus_norvegicus
ENSPTRG00000016968	PTCD2	100	84.278	ENSRBIG00000032929	PTCD2	100	84.278	Rhinopithecus_bieti
ENSPTRG00000016968	PTCD2	99	90.339	ENSRROG00000000080	PTCD2	100	90.339	Rhinopithecus_roxellana
ENSPTRG00000016968	PTCD2	99	85.640	ENSSBOG00000018911	PTCD2	100	85.640	Saimiri_boliviensis_boliviensis
ENSPTRG00000016968	PTCD2	99	58.854	ENSSHAG00000003833	PTCD2	99	58.854	Sarcophilus_harrisii
ENSPTRG00000016968	PTCD2	86	46.847	ENSSFOG00015015415	ptcd2	86	46.847	Scleropages_formosus
ENSPTRG00000016968	PTCD2	89	44.669	ENSSMAG00000010350	ptcd2	90	44.669	Scophthalmus_maximus
ENSPTRG00000016968	PTCD2	98	45.910	ENSSDUG00000008142	ptcd2	92	45.910	Seriola_dumerili
ENSPTRG00000016968	PTCD2	98	46.174	ENSSLDG00000015284	ptcd2	96	46.174	Seriola_lalandi_dorsalis
ENSPTRG00000016968	PTCD2	80	70.000	ENSSARG00000004983	PTCD2	99	70.000	Sorex_araneus
ENSPTRG00000016968	PTCD2	99	51.169	ENSSPUG00000000176	PTCD2	96	51.169	Sphenodon_punctatus
ENSPTRG00000016968	PTCD2	94	44.231	ENSSPAG00000008591	ptcd2	93	44.231	Stegastes_partitus
ENSPTRG00000016968	PTCD2	99	81.818	ENSSSCG00000016975	PTCD2	90	81.818	Sus_scrofa
ENSPTRG00000016968	PTCD2	89	51.014	ENSTGUG00000005705	PTCD2	99	51.014	Taeniopygia_guttata
ENSPTRG00000016968	PTCD2	99	78.497	ENSTBEG00000016559	PTCD2	99	78.497	Tupaia_belangeri
ENSPTRG00000016968	PTCD2	99	81.912	ENSTTRG00000011851	PTCD2	99	81.912	Tursiops_truncatus
ENSPTRG00000016968	PTCD2	99	78.182	ENSUAMG00000007583	PTCD2	90	78.182	Ursus_americanus
ENSPTRG00000016968	PTCD2	99	77.807	ENSUMAG00000007666	PTCD2	100	77.807	Ursus_maritimus
ENSPTRG00000016968	PTCD2	99	80.362	ENSVPAG00000009597	PTCD2	99	80.362	Vicugna_pacos
ENSPTRG00000016968	PTCD2	99	76.501	ENSVVUG00000007299	-	100	76.501	Vulpes_vulpes
ENSPTRG00000016968	PTCD2	90	52.422	ENSXETG00000031652	PTCD2	92	52.422	Xenopus_tropicalis
ENSPTRG00000016968	PTCD2	90	43.678	ENSXMAG00000005940	ptcd2	82	43.678	Xiphophorus_maculatus