EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPTRG00000017074 (Gene tree)
Gene ID: 737106
Gene Symbol: FAM172A
Alias: -
Full Name: family with sequence similarity 172 member A
Gene Type: protein_coding
Species: Pan_troglodytes
Status: putative
Strand: Plus strand
Length: 455168 bases
Position: chr5:21444559-21899726
Accession: 3990
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTRP00000068175	Arb2	PF09757.9	1.5e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTRT00000097268	-	885	XM_009448855	ENSPTRP00000068175	294 (aa)	-	A0A2I3RU80
ENSPTRT00000100297	-	1302	-	ENSPTRP00000077575	433 (aa)	-	A0A2I3SM43
ENSPTRT00000097322	-	1110	-	ENSPTRP00000084889	369 (aa)	-	A0A2I3T6K8
ENSPTRT00000031634	-	1251	XM_001137302	ENSPTRP00000029223	416 (aa)	XP_001137302	H2QR83

Gene Model

Click here to download ENSPTRG00000017074's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000017074's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTRG00000017074	FAM172A	99	97.619	ENSG00000113391	FAM172A	96	97.619	Homo_sapiens
ENSPTRG00000017074	FAM172A	64	41.579	ENSAPLG00000011555	-	77	41.579	Anas_platyrhynchos
ENSPTRG00000017074	FAM172A	92	88.148	ENSAPLG00000004055	FAM172A	65	88.148	Anas_platyrhynchos
ENSPTRG00000017074	FAM172A	92	87.823	ENSACAG00000013305	FAM172A	70	87.823	Anolis_carolinensis
ENSPTRG00000017074	FAM172A	93	97.802	ENSANAG00000035869	FAM172A	88	96.825	Aotus_nancymaae
ENSPTRG00000017074	FAM172A	92	97.037	ENSBTAG00000050195	FAM172A	65	97.037	Bos_taurus
ENSPTRG00000017074	FAM172A	92	97.778	ENSCJAG00000010444	FAM172A	65	97.778	Callithrix_jacchus
ENSPTRG00000017074	FAM172A	92	97.407	ENSCAFG00000008064	FAM172A	73	97.407	Canis_familiaris
ENSPTRG00000017074	FAM172A	94	96.014	ENSCAFG00020006210	FAM172A	99	96.014	Canis_lupus_dingo
ENSPTRG00000017074	FAM172A	92	97.037	ENSCHIG00000008440	FAM172A	65	97.037	Capra_hircus
ENSPTRG00000017074	FAM172A	90	97.744	ENSTSYG00000006286	FAM172A	85	97.744	Carlito_syrichta
ENSPTRG00000017074	FAM172A	58	85.841	ENSCAPG00000014103	-	69	85.841	Cavia_aperea
ENSPTRG00000017074	FAM172A	99	98.294	ENSCCAG00000023116	FAM172A	99	98.294	Cebus_capucinus
ENSPTRG00000017074	FAM172A	92	95.556	ENSCLAG00000005472	FAM172A	74	94.086	Chinchilla_lanigera
ENSPTRG00000017074	FAM172A	92	44.689	ENSCPBG00000004402	-	69	44.689	Chrysemys_picta_bellii
ENSPTRG00000017074	FAM172A	100	98.980	ENSCANG00000040412	FAM172A	100	98.980	Colobus_angolensis_palliatus
ENSPTRG00000017074	FAM172A	92	97.037	ENSDNOG00000004689	FAM172A	65	97.037	Dasypus_novemcinctus
ENSPTRG00000017074	FAM172A	99	95.517	ENSDORG00000013558	Fam172a	95	95.517	Dipodomys_ordii
ENSPTRG00000017074	FAM172A	92	94.815	ENSECAG00000018274	FAM172A	72	94.796	Equus_caballus
ENSPTRG00000017074	FAM172A	92	94.444	ENSEEUG00000002887	FAM172A	65	94.444	Erinaceus_europaeus
ENSPTRG00000017074	FAM172A	92	67.407	ENSELUG00000017647	fam172a	64	67.407	Esox_lucius
ENSPTRG00000017074	FAM172A	92	97.407	ENSFCAG00000025443	FAM172A	65	97.407	Felis_catus
ENSPTRG00000017074	FAM172A	92	45.055	ENSFALG00000006501	-	74	45.055	Ficedula_albicollis
ENSPTRG00000017074	FAM172A	92	86.667	ENSFALG00000009072	FAM172A	73	86.667	Ficedula_albicollis
ENSPTRG00000017074	FAM172A	92	88.148	ENSGALG00000014661	FAM172A	65	88.148	Gallus_gallus
ENSPTRG00000017074	FAM172A	92	45.421	ENSGAGG00000022828	-	70	45.421	Gopherus_agassizii
ENSPTRG00000017074	FAM172A	92	90.741	ENSGAGG00000003839	FAM172A	65	90.741	Gopherus_agassizii
ENSPTRG00000017074	FAM172A	100	98.980	ENSGGOG00000010296	FAM172A	100	98.980	Gorilla_gorilla
ENSPTRG00000017074	FAM172A	92	95.926	ENSHGLG00000011178	FAM172A	67	94.624	Heterocephalus_glaber_female
ENSPTRG00000017074	FAM172A	91	95.911	ENSHGLG00100013340	FAM172A	79	94.595	Heterocephalus_glaber_male
ENSPTRG00000017074	FAM172A	92	97.407	ENSSTOG00000009918	FAM172A	65	97.407	Ictidomys_tridecemlineatus
ENSPTRG00000017074	FAM172A	92	48.339	ENSLACG00000001532	si:ch73-41e3.7	71	48.339	Latimeria_chalumnae
ENSPTRG00000017074	FAM172A	92	74.074	ENSLOCG00000001629	fam172a	65	75.185	Lepisosteus_oculatus
ENSPTRG00000017074	FAM172A	100	98.639	ENSMFAG00000001171	FAM172A	100	98.639	Macaca_fascicularis
ENSPTRG00000017074	FAM172A	100	98.639	ENSMNEG00000039938	FAM172A	100	98.639	Macaca_nemestrina
ENSPTRG00000017074	FAM172A	99	97.260	ENSMICG00000030403	FAM172A	94	97.260	Microcebus_murinus
ENSPTRG00000017074	FAM172A	92	94.444	ENSMOCG00000003613	Fam172a	73	94.444	Microtus_ochrogaster
ENSPTRG00000017074	FAM172A	92	89.630	ENSMODG00000020131	FAM172A	65	89.630	Monodelphis_domestica
ENSPTRG00000017074	FAM172A	72	91.935	MGP_PahariEiJ_G0015818	Fam172a	67	91.935	Mus_pahari
ENSPTRG00000017074	FAM172A	92	97.037	ENSNGAG00000019570	Fam172a	73	97.037	Nannospalax_galili
ENSPTRG00000017074	FAM172A	98	99.306	ENSNLEG00000013903	FAM172A	94	99.306	Nomascus_leucogenys
ENSPTRG00000017074	FAM172A	93	89.338	ENSOANG00000011068	FAM172A	73	89.338	Ornithorhynchus_anatinus
ENSPTRG00000017074	FAM172A	92	96.296	ENSOCUG00000007299	FAM172A	64	96.296	Oryctolagus_cuniculus
ENSPTRG00000017074	FAM172A	92	96.296	ENSOGAG00000015189	FAM172A	65	96.296	Otolemur_garnettii
ENSPTRG00000017074	FAM172A	91	97.026	ENSOARG00000016711	FAM172A	61	97.026	Ovis_aries
ENSPTRG00000017074	FAM172A	100	100.000	ENSPPAG00000030542	FAM172A	100	100.000	Pan_paniscus
ENSPTRG00000017074	FAM172A	92	97.407	ENSPPRG00000006653	FAM172A	65	97.407	Panthera_pardus
ENSPTRG00000017074	FAM172A	92	97.407	ENSPTIG00000012681	FAM172A	65	97.407	Panthera_tigris_altaica
ENSPTRG00000017074	FAM172A	100	98.639	ENSPANG00000011687	FAM172A	100	98.639	Papio_anubis
ENSPTRG00000017074	FAM172A	92	71.587	ENSPKIG00000012314	fam172a	72	70.545	Paramormyrops_kingsleyae
ENSPTRG00000017074	FAM172A	92	93.704	ENSPEMG00000009604	-	65	93.704	Peromyscus_maniculatus_bairdii
ENSPTRG00000017074	FAM172A	92	89.630	ENSPCIG00000028612	FAM172A	65	89.630	Phascolarctos_cinereus
ENSPTRG00000017074	FAM172A	62	98.343	ENSPCOG00000024072	FAM172A	73	98.343	Propithecus_coquereli
ENSPTRG00000017074	FAM172A	92	95.203	ENSRNOG00000013844	Fam172a	100	95.203	Rattus_norvegicus
ENSPTRG00000017074	FAM172A	60	93.785	ENSRBIG00000028680	-	79	93.785	Rhinopithecus_bieti
ENSPTRG00000017074	FAM172A	100	98.980	ENSRROG00000023807	FAM172A	100	98.980	Rhinopithecus_roxellana
ENSPTRG00000017074	FAM172A	92	97.407	ENSSBOG00000019860	FAM172A	70	95.620	Saimiri_boliviensis_boliviensis
ENSPTRG00000017074	FAM172A	92	88.889	ENSSHAG00000013743	FAM172A	65	88.889	Sarcophilus_harrisii
ENSPTRG00000017074	FAM172A	92	89.630	ENSSPUG00000008161	FAM172A	65	89.630	Sphenodon_punctatus
ENSPTRG00000017074	FAM172A	92	97.037	ENSSSCG00000027608	FAM172A	88	85.276	Sus_scrofa
ENSPTRG00000017074	FAM172A	92	46.909	ENSTGUG00000013623	-	82	46.909	Taeniopygia_guttata
ENSPTRG00000017074	FAM172A	92	86.296	ENSTGUG00000000715	FAM172A	71	86.296	Taeniopygia_guttata
ENSPTRG00000017074	FAM172A	84	48.800	ENSTNIG00000009902	fam172a	75	51.587	Tetraodon_nigroviridis
ENSPTRG00000017074	FAM172A	92	97.407	ENSTTRG00000001521	FAM172A	65	97.407	Tursiops_truncatus
ENSPTRG00000017074	FAM172A	92	97.407	ENSUMAG00000005442	FAM172A	72	97.037	Ursus_maritimus
ENSPTRG00000017074	FAM172A	92	97.407	ENSVVUG00000022112	FAM172A	71	97.407	Vulpes_vulpes
ENSPTRG00000017074	FAM172A	92	43.636	ENSXETG00000033027	-	70	43.636	Xenopus_tropicalis
ENSPTRG00000017074	FAM172A	92	81.550	ENSXETG00000011592	fam172a	64	81.550	Xenopus_tropicalis