EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPTRG00000017447 (Gene tree)
Gene ID: 462356
Gene Symbol: LARP1
Alias: -
Full Name: La ribonucleoprotein domain family member 1
Gene Type: protein_coding
Species: Pan_troglodytes
Status: putative
Strand: Plus strand
Length: 104938 bases
Position: chr5:154966667-155071604
Accession: 4065
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTRP00000074560	La	PF05383.17	1.3e-20	1	1
ENSPTRP00000029804	La	PF05383.17	1.4e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTRT00000086168	-	3060	XM_009450027	ENSPTRP00000074560	1019 (aa)	XP_009448302	A0A2I3SBY6
ENSPTRT00000032260	-	7177	XM_009450023	ENSPTRP00000029804	1063 (aa)	XP_009448298	H2QRV3

Gene Model

Click here to download ENSPTRG00000017447's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000017447's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPTRG00000017447	LARP1	87	59.320	ENSPTRG00000016437	LARP1B	96	59.451

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTRG00000017447	LARP1	100	99.509	ENSG00000155506	LARP1	100	99.672	Homo_sapiens
ENSPTRG00000017447	LARP1	88	81.938	ENSAPOG00000020685	larp1	98	82.870	Acanthochromis_polyacanthus
ENSPTRG00000017447	LARP1	93	96.649	ENSAMEG00000016673	LARP1	99	96.649	Ailuropoda_melanoleuca
ENSPTRG00000017447	LARP1	99	62.336	ENSACIG00000012994	larp1	99	61.553	Amphilophus_citrinellus
ENSPTRG00000017447	LARP1	80	70.128	ENSAOCG00000007792	larp1	97	70.686	Amphiprion_ocellaris
ENSPTRG00000017447	LARP1	98	62.249	ENSAPEG00000022246	larp1	97	61.813	Amphiprion_percula
ENSPTRG00000017447	LARP1	97	62.245	ENSATEG00000013523	larp1	96	61.935	Anabas_testudineus
ENSPTRG00000017447	LARP1	87	83.278	ENSAPLG00000007559	LARP1	100	83.389	Anas_platyrhynchos
ENSPTRG00000017447	LARP1	94	79.571	ENSACAG00000004071	LARP1	100	79.325	Anolis_carolinensis
ENSPTRG00000017447	LARP1	100	98.433	ENSANAG00000029949	LARP1	100	98.433	Aotus_nancymaae
ENSPTRG00000017447	LARP1	92	74.663	ENSACLG00000015256	larp1	92	74.328	Astatotilapia_calliptera
ENSPTRG00000017447	LARP1	89	71.304	ENSAMXG00000000859	larp1	89	68.288	Astyanax_mexicanus
ENSPTRG00000017447	LARP1	100	90.446	ENSBTAG00000008443	LARP1	100	91.720	Bos_taurus
ENSPTRG00000017447	LARP1	100	98.433	ENSCJAG00000004454	LARP1	100	98.433	Callithrix_jacchus
ENSPTRG00000017447	LARP1	93	97.065	ENSCAFG00000017639	LARP1	99	97.065	Canis_familiaris
ENSPTRG00000017447	LARP1	87	96.983	ENSCAFG00020023860	LARP1	100	96.983	Canis_lupus_dingo
ENSPTRG00000017447	LARP1	99	94.922	ENSCHIG00000014414	LARP1	100	90.228	Capra_hircus
ENSPTRG00000017447	LARP1	99	93.811	ENSTSYG00000013732	LARP1	99	95.987	Carlito_syrichta
ENSPTRG00000017447	LARP1	83	94.194	ENSCAPG00000013865	LARP1	87	94.194	Cavia_aperea
ENSPTRG00000017447	LARP1	93	96.331	ENSCPOG00000003377	LARP1	100	96.331	Cavia_porcellus
ENSPTRG00000017447	LARP1	100	98.041	ENSCCAG00000025201	LARP1	100	98.041	Cebus_capucinus
ENSPTRG00000017447	LARP1	100	98.727	ENSCATG00000030675	LARP1	100	98.727	Cercocebus_atys
ENSPTRG00000017447	LARP1	93	96.440	ENSCLAG00000012755	LARP1	99	95.591	Chinchilla_lanigera
ENSPTRG00000017447	LARP1	87	95.297	ENSCSAG00000010800	LARP1	100	98.953	Chlorocebus_sabaeus
ENSPTRG00000017447	LARP1	86	87.554	ENSCHOG00000012716	LARP1	92	87.446	Choloepus_hoffmanni
ENSPTRG00000017447	LARP1	95	80.370	ENSCPBG00000002173	LARP1	95	80.370	Chrysemys_picta_bellii
ENSPTRG00000017447	LARP1	100	98.531	ENSCANG00000037418	LARP1	100	98.531	Colobus_angolensis_palliatus
ENSPTRG00000017447	LARP1	93	95.188	ENSCGRG00001016913	Larp1	100	87.818	Cricetulus_griseus_chok1gshd
ENSPTRG00000017447	LARP1	90	90.316	ENSCGRG00000009916	Larp1	99	90.642	Cricetulus_griseus_crigri
ENSPTRG00000017447	LARP1	99	61.026	ENSCSEG00000016431	larp1	97	62.044	Cynoglossus_semilaevis
ENSPTRG00000017447	LARP1	99	63.047	ENSCVAG00000022687	larp1	96	62.741	Cyprinodon_variegatus
ENSPTRG00000017447	LARP1	92	66.209	ENSDARG00000101722	larp1	95	63.525	Danio_rerio
ENSPTRG00000017447	LARP1	100	91.033	ENSDNOG00000012073	LARP1	100	90.580	Dasypus_novemcinctus
ENSPTRG00000017447	LARP1	93	92.775	ENSDORG00000002897	Larp1	99	96.095	Dipodomys_ordii
ENSPTRG00000017447	LARP1	86	96.250	ENSETEG00000020251	LARP1	100	96.250	Echinops_telfairi
ENSPTRG00000017447	LARP1	100	91.651	ENSEASG00005001070	LARP1	100	92.495	Equus_asinus_asinus
ENSPTRG00000017447	LARP1	100	91.651	ENSECAG00000017002	LARP1	79	92.461	Equus_caballus
ENSPTRG00000017447	LARP1	91	89.914	ENSEEUG00000001065	LARP1	100	90.343	Erinaceus_europaeus
ENSPTRG00000017447	LARP1	93	67.872	ENSELUG00000019403	larp1	99	60.606	Esox_lucius
ENSPTRG00000017447	LARP1	100	91.300	ENSFCAG00000000592	LARP1	100	92.559	Felis_catus
ENSPTRG00000017447	LARP1	82	80.332	ENSFALG00000008335	LARP1	99	80.737	Ficedula_albicollis
ENSPTRG00000017447	LARP1	93	96.537	ENSFDAG00000021125	LARP1	100	96.537	Fukomys_damarensis
ENSPTRG00000017447	LARP1	63	51.937	ENSFHEG00000020307	larp1	92	63.636	Fundulus_heteroclitus
ENSPTRG00000017447	LARP1	98	78.529	ENSGALG00000040109	LARP1	100	74.909	Gallus_gallus
ENSPTRG00000017447	LARP1	94	80.311	ENSGAGG00000025113	LARP1	99	80.525	Gopherus_agassizii
ENSPTRG00000017447	LARP1	100	99.411	ENSGGOG00000006048	LARP1	100	99.411	Gorilla_gorilla
ENSPTRG00000017447	LARP1	99	62.063	ENSHBUG00000020762	larp1	98	68.315	Haplochromis_burtoni
ENSPTRG00000017447	LARP1	100	88.768	ENSHGLG00000006267	LARP1	100	88.768	Heterocephalus_glaber_female
ENSPTRG00000017447	LARP1	93	96.017	ENSHGLG00100014230	-	100	96.017	Heterocephalus_glaber_male
ENSPTRG00000017447	LARP1	97	76.663	ENSHGLG00100003395	-	98	75.985	Heterocephalus_glaber_male
ENSPTRG00000017447	LARP1	92	79.236	ENSHCOG00000010786	larp1	99	78.998	Hippocampus_comes
ENSPTRG00000017447	LARP1	91	65.924	ENSIPUG00000019105	Larp1	93	65.589	Ictalurus_punctatus
ENSPTRG00000017447	LARP1	93	93.508	ENSSTOG00000005678	LARP1	99	96.855	Ictidomys_tridecemlineatus
ENSPTRG00000017447	LARP1	97	87.273	ENSJJAG00000016950	Larp1	100	82.818	Jaculus_jaculus
ENSPTRG00000017447	LARP1	97	62.397	ENSKMAG00000018468	larp1	95	67.883	Kryptolebias_marmoratus
ENSPTRG00000017447	LARP1	99	61.056	ENSLBEG00000027172	larp1	98	60.838	Labrus_bergylta
ENSPTRG00000017447	LARP1	87	75.084	ENSLOCG00000012457	larp1	99	66.957	Lepisosteus_oculatus
ENSPTRG00000017447	LARP1	100	88.949	ENSLAFG00000008991	LARP1	100	89.493	Loxodonta_africana
ENSPTRG00000017447	LARP1	100	98.433	ENSMFAG00000031651	LARP1	100	98.433	Macaca_fascicularis
ENSPTRG00000017447	LARP1	93	95.178	ENSMMUG00000009411	LARP1	99	98.588	Macaca_mulatta
ENSPTRG00000017447	LARP1	100	94.123	ENSMNEG00000039294	LARP1	100	98.656	Macaca_nemestrina
ENSPTRG00000017447	LARP1	100	98.825	ENSMLEG00000035142	LARP1	100	98.825	Mandrillus_leucophaeus
ENSPTRG00000017447	LARP1	93	67.543	ENSMAMG00000021788	larp1	99	60.978	Mastacembelus_armatus
ENSPTRG00000017447	LARP1	99	61.696	ENSMZEG00005009345	larp1	98	67.271	Maylandia_zebra
ENSPTRG00000017447	LARP1	93	80.352	ENSMGAG00000005696	LARP1	100	80.124	Meleagris_gallopavo
ENSPTRG00000017447	LARP1	93	95.188	ENSMAUG00000001385	Larp1	100	87.545	Mesocricetus_auratus
ENSPTRG00000017447	LARP1	99	92.338	ENSMICG00000000837	LARP1	99	96.756	Microcebus_murinus
ENSPTRG00000017447	LARP1	93	95.397	ENSMOCG00000008920	Larp1	100	87.818	Microtus_ochrogaster
ENSPTRG00000017447	LARP1	86	59.111	ENSMMOG00000013364	larp1	95	52.988	Mola_mola
ENSPTRG00000017447	LARP1	94	82.784	ENSMODG00000008663	LARP1	100	82.784	Monodelphis_domestica
ENSPTRG00000017447	LARP1	93	67.071	ENSMALG00000017180	larp1	95	69.371	Monopterus_albus
ENSPTRG00000017447	LARP1	93	94.874	MGP_CAROLIEiJ_G0016383	Larp1	100	87.545	Mus_caroli
ENSPTRG00000017447	LARP1	93	95.068	ENSMUSG00000037331	Larp1	99	87.694	Mus_musculus
ENSPTRG00000017447	LARP1	93	95.188	MGP_PahariEiJ_G0017518	Larp1	100	87.648	Mus_pahari
ENSPTRG00000017447	LARP1	93	95.173	MGP_SPRETEiJ_G0017225	Larp1	99	87.694	Mus_spretus
ENSPTRG00000017447	LARP1	81	92.597	ENSMPUG00000013564	LARP1	99	92.597	Mustela_putorius_furo
ENSPTRG00000017447	LARP1	93	92.857	ENSMLUG00000002608	LARP1	99	92.857	Myotis_lucifugus
ENSPTRG00000017447	LARP1	94	90.501	ENSNGAG00000001098	Larp1	99	93.933	Nannospalax_galili
ENSPTRG00000017447	LARP1	90	68.274	ENSNBRG00000008963	larp1	91	68.528	Neolamprologus_brichardi
ENSPTRG00000017447	LARP1	100	96.271	ENSNLEG00000016588	LARP1	100	96.271	Nomascus_leucogenys
ENSPTRG00000017447	LARP1	93	76.786	ENSMEUG00000002957	LARP1	100	76.996	Notamacropus_eugenii
ENSPTRG00000017447	LARP1	93	96.226	ENSOPRG00000013014	LARP1	100	96.226	Ochotona_princeps
ENSPTRG00000017447	LARP1	95	94.318	ENSODEG00000010824	LARP1	100	95.493	Octodon_degus
ENSPTRG00000017447	LARP1	99	63.249	ENSONIG00000017308	larp1	99	63.324	Oreochromis_niloticus
ENSPTRG00000017447	LARP1	94	81.417	ENSOANG00000005096	LARP1	99	81.949	Ornithorhynchus_anatinus
ENSPTRG00000017447	LARP1	100	95.314	ENSOCUG00000013066	LARP1	100	95.876	Oryctolagus_cuniculus
ENSPTRG00000017447	LARP1	90	68.303	ENSORLG00000000824	larp1	96	71.306	Oryzias_latipes
ENSPTRG00000017447	LARP1	90	68.303	ENSORLG00020022241	larp1	97	60.922	Oryzias_latipes_hni
ENSPTRG00000017447	LARP1	97	61.204	ENSORLG00015007538	larp1	97	60.926	Oryzias_latipes_hsok
ENSPTRG00000017447	LARP1	97	61.213	ENSOMEG00000003134	larp1	97	61.121	Oryzias_melastigma
ENSPTRG00000017447	LARP1	93	96.436	ENSOGAG00000016750	LARP1	100	96.436	Otolemur_garnettii
ENSPTRG00000017447	LARP1	93	93.704	ENSOARG00000009893	LARP1	99	94.124	Ovis_aries
ENSPTRG00000017447	LARP1	100	99.804	ENSPPAG00000042993	LARP1	100	99.804	Pan_paniscus
ENSPTRG00000017447	LARP1	99	92.232	ENSPPRG00000009780	LARP1	99	92.232	Panthera_pardus
ENSPTRG00000017447	LARP1	99	91.855	ENSPTIG00000007013	LARP1	99	91.855	Panthera_tigris_altaica
ENSPTRG00000017447	LARP1	100	98.531	ENSPANG00000008080	LARP1	100	98.531	Papio_anubis
ENSPTRG00000017447	LARP1	99	60.205	ENSPKIG00000017153	-	99	61.319	Paramormyrops_kingsleyae
ENSPTRG00000017447	LARP1	93	69.678	ENSPKIG00000010096	larp1	97	63.367	Paramormyrops_kingsleyae
ENSPTRG00000017447	LARP1	88	67.838	ENSPMGG00000011599	larp1	93	68.392	Periophthalmus_magnuspinnatus
ENSPTRG00000017447	LARP1	93	91.832	ENSPEMG00000022523	Larp1	99	95.119	Peromyscus_maniculatus_bairdii
ENSPTRG00000017447	LARP1	96	81.001	ENSPCIG00000019242	LARP1	80	88.119	Phascolarctos_cinereus
ENSPTRG00000017447	LARP1	97	61.167	ENSPFOG00000005836	larp1	96	60.198	Poecilia_formosa
ENSPTRG00000017447	LARP1	97	62.747	ENSPLAG00000008936	larp1	96	61.724	Poecilia_latipinna
ENSPTRG00000017447	LARP1	97	61.419	ENSPMEG00000013656	larp1	96	60.592	Poecilia_mexicana
ENSPTRG00000017447	LARP1	90	67.681	ENSPREG00000005726	larp1	95	67.857	Poecilia_reticulata
ENSPTRG00000017447	LARP1	93	89.937	ENSPCAG00000006407	LARP1	100	90.147	Procavia_capensis
ENSPTRG00000017447	LARP1	93	88.679	ENSPCOG00000016949	LARP1	100	92.243	Propithecus_coquereli
ENSPTRG00000017447	LARP1	100	89.946	ENSPVAG00000002262	LARP1	100	91.757	Pteropus_vampyrus
ENSPTRG00000017447	LARP1	99	61.607	ENSPNYG00000007938	larp1	98	67.271	Pundamilia_nyererei
ENSPTRG00000017447	LARP1	93	70.273	ENSPNAG00000021427	larp1	96	64.632	Pygocentrus_nattereri
ENSPTRG00000017447	LARP1	94	92.059	ENSRNOG00000031544	Larp1	99	95.450	Rattus_norvegicus
ENSPTRG00000017447	LARP1	100	98.629	ENSRBIG00000038005	LARP1	100	98.629	Rhinopithecus_bieti
ENSPTRG00000017447	LARP1	100	98.727	ENSRROG00000034073	LARP1	100	99.216	Rhinopithecus_roxellana
ENSPTRG00000017447	LARP1	100	96.768	ENSSBOG00000019816	LARP1	100	99.132	Saimiri_boliviensis_boliviensis
ENSPTRG00000017447	LARP1	93	84.277	ENSSHAG00000011115	LARP1	99	84.277	Sarcophilus_harrisii
ENSPTRG00000017447	LARP1	92	69.125	ENSSFOG00015018058	-	95	63.023	Scleropages_formosus
ENSPTRG00000017447	LARP1	90	69.030	ENSSFOG00015020304	larp1	94	66.903	Scleropages_formosus
ENSPTRG00000017447	LARP1	94	61.412	ENSSMAG00000007468	larp1	98	61.148	Scophthalmus_maximus
ENSPTRG00000017447	LARP1	99	60.651	ENSSDUG00000000268	larp1	95	70.513	Seriola_dumerili
ENSPTRG00000017447	LARP1	86	69.161	ENSSLDG00000016505	larp1	95	70.513	Seriola_lalandi_dorsalis
ENSPTRG00000017447	LARP1	60	93.286	ENSSARG00000013907	-	89	93.286	Sorex_araneus
ENSPTRG00000017447	LARP1	95	80.102	ENSSPUG00000012179	-	100	73.033	Sphenodon_punctatus
ENSPTRG00000017447	LARP1	93	67.548	ENSSPAG00000003910	larp1	99	61.131	Stegastes_partitus
ENSPTRG00000017447	LARP1	100	91.198	ENSSSCG00000017069	LARP1	100	95.759	Sus_scrofa
ENSPTRG00000017447	LARP1	89	82.571	ENSTGUG00000000704	LARP1	100	83.007	Taeniopygia_guttata
ENSPTRG00000017447	LARP1	99	60.545	ENSTRUG00000009470	larp1	99	60.000	Takifugu_rubripes
ENSPTRG00000017447	LARP1	86	93.898	ENSTBEG00000003381	LARP1	100	94.463	Tupaia_belangeri
ENSPTRG00000017447	LARP1	92	95.643	ENSTTRG00000015934	LARP1	100	96.017	Tursiops_truncatus
ENSPTRG00000017447	LARP1	100	93.103	ENSUAMG00000019334	LARP1	100	93.103	Ursus_americanus
ENSPTRG00000017447	LARP1	92	93.949	ENSUMAG00000002934	LARP1	98	95.852	Ursus_maritimus
ENSPTRG00000017447	LARP1	87	96.983	ENSVVUG00000004644	LARP1	100	96.983	Vulpes_vulpes
ENSPTRG00000017447	LARP1	93	75.656	ENSXETG00000008413	larp1	94	72.239	Xenopus_tropicalis
ENSPTRG00000017447	LARP1	85	73.582	ENSXCOG00000004022	larp1	93	73.980	Xiphophorus_couchianus
ENSPTRG00000017447	LARP1	97	61.293	ENSXMAG00000018780	larp1	96	60.740	Xiphophorus_maculatus