EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPTRG00000017636 (Gene tree)
Gene ID: -
Gene Symbol: CNOT6
Alias: -
Full Name: CCR4-NOT transcription complex subunit 6
Gene Type: protein_coding
Species: Pan_troglodytes
Status: putative
Strand: Plus strand
Length: 83902 bases
Position: chr5:181121546-181205447
Accession: 6841
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTRP00000030128	Exo_endo_phos	PF03372.23	8e-22	1	1
ENSPTRP00000069359	Exo_endo_phos	PF03372.23	8.3e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTRT00000101531	-	6798	XM_001155177	ENSPTRP00000069359	557 (aa)	XP_001155177	A0A2I3RXM9
ENSPTRT00000032605	-	6025	XM_009450331	ENSPTRP00000030128	552 (aa)	XP_009448606	H2QS65

Gene Model

Click here to download ENSPTRG00000017636's gene model file

Pathways

Pathway ID	Pathway Name	Source
ptr03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000017636's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPTRG00000017636	CNOT6	84	89.474	ENSPTRG00000045291	-	99	89.474
ENSPTRG00000017636	CNOT6	100	79.348	ENSPTRG00000016198	CNOT6L	99	79.348

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTRG00000017636	CNOT6	100	100.000	ENSG00000113300	CNOT6	100	100.000	Homo_sapiens
ENSPTRG00000017636	CNOT6	100	86.762	ENSAPOG00000009994	cnot6b	100	86.762	Acanthochromis_polyacanthus
ENSPTRG00000017636	CNOT6	100	97.674	ENSAMEG00000000949	CNOT6	99	97.674	Ailuropoda_melanoleuca
ENSPTRG00000017636	CNOT6	100	86.282	ENSACIG00000016566	cnot6b	100	86.282	Amphilophus_citrinellus
ENSPTRG00000017636	CNOT6	100	86.762	ENSAOCG00000006893	cnot6b	100	86.762	Amphiprion_ocellaris
ENSPTRG00000017636	CNOT6	100	86.762	ENSAPEG00000016949	cnot6b	100	86.762	Amphiprion_percula
ENSPTRG00000017636	CNOT6	100	84.615	ENSATEG00000007862	cnot6b	100	84.615	Anabas_testudineus
ENSPTRG00000017636	CNOT6	100	95.691	ENSAPLG00000012715	CNOT6	99	95.691	Anas_platyrhynchos
ENSPTRG00000017636	CNOT6	100	92.998	ENSACAG00000016548	CNOT6	100	92.998	Anolis_carolinensis
ENSPTRG00000017636	CNOT6	100	98.923	ENSANAG00000030436	CNOT6	96	98.923	Aotus_nancymaae
ENSPTRG00000017636	CNOT6	100	84.794	ENSACLG00000008279	cnot6b	100	85.689	Astatotilapia_calliptera
ENSPTRG00000017636	CNOT6	100	84.946	ENSAMXG00000034694	cnot6b	100	84.946	Astyanax_mexicanus
ENSPTRG00000017636	CNOT6	100	86.380	ENSAMXG00000019140	cnot6a	100	86.380	Astyanax_mexicanus
ENSPTRG00000017636	CNOT6	100	97.487	ENSBTAG00000017362	CNOT6	100	97.487	Bos_taurus
ENSPTRG00000017636	CNOT6	100	98.743	ENSCJAG00000009795	CNOT6	100	98.743	Callithrix_jacchus
ENSPTRG00000017636	CNOT6	100	98.025	ENSCAFG00000000464	CNOT6	100	98.025	Canis_familiaris
ENSPTRG00000017636	CNOT6	100	98.025	ENSCAFG00020002441	CNOT6	100	98.025	Canis_lupus_dingo
ENSPTRG00000017636	CNOT6	100	96.948	ENSCHIG00000019100	CNOT6	100	96.948	Capra_hircus
ENSPTRG00000017636	CNOT6	100	96.230	ENSTSYG00000003982	CNOT6	100	96.230	Carlito_syrichta
ENSPTRG00000017636	CNOT6	100	92.101	ENSCPOG00000035657	CNOT6	100	92.101	Cavia_porcellus
ENSPTRG00000017636	CNOT6	100	94.255	ENSCCAG00000033670	CNOT6	100	94.255	Cebus_capucinus
ENSPTRG00000017636	CNOT6	100	99.641	ENSCATG00000042014	CNOT6	100	99.641	Cercocebus_atys
ENSPTRG00000017636	CNOT6	100	95.691	ENSCLAG00000010489	CNOT6	100	95.691	Chinchilla_lanigera
ENSPTRG00000017636	CNOT6	100	99.641	ENSCSAG00000008165	CNOT6	100	99.641	Chlorocebus_sabaeus
ENSPTRG00000017636	CNOT6	100	95.691	ENSCHOG00000009680	CNOT6	100	95.691	Choloepus_hoffmanni
ENSPTRG00000017636	CNOT6	100	95.153	ENSCPBG00000008908	CNOT6	100	95.153	Chrysemys_picta_bellii
ENSPTRG00000017636	CNOT6	100	99.461	ENSCANG00000026756	CNOT6	100	99.461	Colobus_angolensis_palliatus
ENSPTRG00000017636	CNOT6	100	96.014	ENSCGRG00001011452	Cnot6	100	96.014	Cricetulus_griseus_chok1gshd
ENSPTRG00000017636	CNOT6	100	93.357	ENSCGRG00000010407	Cnot6	100	93.357	Cricetulus_griseus_crigri
ENSPTRG00000017636	CNOT6	100	85.868	ENSCSEG00000010939	cnot6b	100	85.868	Cynoglossus_semilaevis
ENSPTRG00000017636	CNOT6	100	85.484	ENSCVAG00000010538	cnot6b	100	85.484	Cyprinodon_variegatus
ENSPTRG00000017636	CNOT6	100	83.513	ENSDARG00000101072	cnot6b	100	83.513	Danio_rerio
ENSPTRG00000017636	CNOT6	100	85.842	ENSDARG00000008255	cnot6a	100	85.842	Danio_rerio
ENSPTRG00000017636	CNOT6	100	96.768	ENSDNOG00000041644	CNOT6	100	96.768	Dasypus_novemcinctus
ENSPTRG00000017636	CNOT6	100	86.535	ENSDORG00000001708	Cnot6	100	86.535	Dipodomys_ordii
ENSPTRG00000017636	CNOT6	100	77.639	ENSETEG00000006975	CNOT6	100	77.639	Echinops_telfairi
ENSPTRG00000017636	CNOT6	100	97.127	ENSEASG00005012794	-	100	97.127	Equus_asinus_asinus
ENSPTRG00000017636	CNOT6	90	92.525	ENSEASG00005012957	-	99	92.525	Equus_asinus_asinus
ENSPTRG00000017636	CNOT6	100	97.846	ENSECAG00000019325	CNOT6	100	97.846	Equus_caballus
ENSPTRG00000017636	CNOT6	100	91.848	ENSECAG00000012704	-	99	91.848	Equus_caballus
ENSPTRG00000017636	CNOT6	100	96.589	ENSEEUG00000015382	CNOT6	100	96.589	Erinaceus_europaeus
ENSPTRG00000017636	CNOT6	100	83.245	ENSELUG00000015981	cnot6b	99	83.245	Esox_lucius
ENSPTRG00000017636	CNOT6	100	81.900	ENSELUG00000024580	cnot6a	100	81.900	Esox_lucius
ENSPTRG00000017636	CNOT6	100	98.025	ENSFCAG00000001881	CNOT6	100	98.025	Felis_catus
ENSPTRG00000017636	CNOT6	100	95.691	ENSFALG00000007699	CNOT6	100	95.691	Ficedula_albicollis
ENSPTRG00000017636	CNOT6	100	95.512	ENSFDAG00000001999	CNOT6	100	95.512	Fukomys_damarensis
ENSPTRG00000017636	CNOT6	65	88.095	ENSFHEG00000013756	cnot6b	96	88.095	Fundulus_heteroclitus
ENSPTRG00000017636	CNOT6	95	84.877	ENSGMOG00000009767	cnot6b	99	84.877	Gadus_morhua
ENSPTRG00000017636	CNOT6	100	95.691	ENSGALG00000034316	CNOT6	100	95.691	Gallus_gallus
ENSPTRG00000017636	CNOT6	100	85.663	ENSGAFG00000008525	cnot6b	100	85.663	Gambusia_affinis
ENSPTRG00000017636	CNOT6	95	82.987	ENSGACG00000018046	cnot6b	99	82.987	Gasterosteus_aculeatus
ENSPTRG00000017636	CNOT6	100	79.174	ENSGAGG00000012176	CNOT6	100	79.174	Gopherus_agassizii
ENSPTRG00000017636	CNOT6	100	100.000	ENSGGOG00000003675	CNOT6	100	100.000	Gorilla_gorilla
ENSPTRG00000017636	CNOT6	100	84.973	ENSHBUG00000002819	cnot6b	100	85.868	Haplochromis_burtoni
ENSPTRG00000017636	CNOT6	100	95.871	ENSHGLG00000017756	CNOT6	100	95.871	Heterocephalus_glaber_female
ENSPTRG00000017636	CNOT6	100	95.871	ENSHGLG00100005747	CNOT6	100	95.871	Heterocephalus_glaber_male
ENSPTRG00000017636	CNOT6	100	84.296	ENSHCOG00000016176	cnot6b	100	85.199	Hippocampus_comes
ENSPTRG00000017636	CNOT6	100	84.409	ENSIPUG00000017482	cnot6b	100	84.409	Ictalurus_punctatus
ENSPTRG00000017636	CNOT6	100	85.484	ENSIPUG00000019831	cnot6a	100	85.484	Ictalurus_punctatus
ENSPTRG00000017636	CNOT6	100	97.127	ENSSTOG00000002803	CNOT6	100	97.127	Ictidomys_tridecemlineatus
ENSPTRG00000017636	CNOT6	100	95.512	ENSJJAG00000012296	Cnot6	100	95.512	Jaculus_jaculus
ENSPTRG00000017636	CNOT6	100	86.559	ENSKMAG00000004640	cnot6b	100	86.559	Kryptolebias_marmoratus
ENSPTRG00000017636	CNOT6	100	83.900	ENSLBEG00000027917	cnot6b	100	84.794	Labrus_bergylta
ENSPTRG00000017636	CNOT6	100	89.964	ENSLOCG00000010102	cnot6b	99	89.964	Lepisosteus_oculatus
ENSPTRG00000017636	CNOT6	100	97.487	ENSLAFG00000016742	CNOT6	100	97.487	Loxodonta_africana
ENSPTRG00000017636	CNOT6	100	99.641	ENSMFAG00000030867	CNOT6	100	99.641	Macaca_fascicularis
ENSPTRG00000017636	CNOT6	100	99.641	ENSMMUG00000018690	CNOT6	100	99.641	Macaca_mulatta
ENSPTRG00000017636	CNOT6	100	99.641	ENSMNEG00000038565	CNOT6	100	99.641	Macaca_nemestrina
ENSPTRG00000017636	CNOT6	100	99.641	ENSMLEG00000010555	CNOT6	100	99.641	Mandrillus_leucophaeus
ENSPTRG00000017636	CNOT6	100	86.941	ENSMAMG00000007515	cnot6b	100	86.941	Mastacembelus_armatus
ENSPTRG00000017636	CNOT6	100	84.794	ENSMZEG00005012899	cnot6b	100	85.689	Maylandia_zebra
ENSPTRG00000017636	CNOT6	100	96.050	ENSMAUG00000019798	Cnot6	100	96.050	Mesocricetus_auratus
ENSPTRG00000017636	CNOT6	100	96.050	ENSMICG00000013018	-	100	96.050	Microcebus_murinus
ENSPTRG00000017636	CNOT6	98	87.500	ENSMICG00000028378	-	99	87.500	Microcebus_murinus
ENSPTRG00000017636	CNOT6	100	96.050	ENSMOCG00000021662	Cnot6	100	96.050	Microtus_ochrogaster
ENSPTRG00000017636	CNOT6	100	84.629	ENSMMOG00000003227	cnot6b	100	84.629	Mola_mola
ENSPTRG00000017636	CNOT6	100	95.871	ENSMODG00000003979	CNOT6	100	95.871	Monodelphis_domestica
ENSPTRG00000017636	CNOT6	100	86.583	ENSMALG00000014251	cnot6b	100	86.583	Monopterus_albus
ENSPTRG00000017636	CNOT6	100	96.230	MGP_CAROLIEiJ_G0016277	Cnot6	100	96.230	Mus_caroli
ENSPTRG00000017636	CNOT6	100	96.230	ENSMUSG00000020362	Cnot6	100	96.230	Mus_musculus
ENSPTRG00000017636	CNOT6	100	96.230	MGP_PahariEiJ_G0017413	Cnot6	100	96.230	Mus_pahari
ENSPTRG00000017636	CNOT6	100	95.871	MGP_SPRETEiJ_G0017122	Cnot6	100	95.871	Mus_spretus
ENSPTRG00000017636	CNOT6	100	97.846	ENSMPUG00000000587	CNOT6	96	97.846	Mustela_putorius_furo
ENSPTRG00000017636	CNOT6	100	95.196	ENSMLUG00000010257	CNOT6	100	95.196	Myotis_lucifugus
ENSPTRG00000017636	CNOT6	100	94.973	ENSNGAG00000008269	Cnot6	100	94.973	Nannospalax_galili
ENSPTRG00000017636	CNOT6	100	84.973	ENSNBRG00000010798	cnot6b	100	85.868	Neolamprologus_brichardi
ENSPTRG00000017636	CNOT6	100	99.638	ENSNLEG00000002322	CNOT6	100	99.638	Nomascus_leucogenys
ENSPTRG00000017636	CNOT6	81	96.262	ENSMEUG00000000025	CNOT6	81	96.262	Notamacropus_eugenii
ENSPTRG00000017636	CNOT6	88	95.943	ENSOPRG00000008244	-	88	95.943	Ochotona_princeps
ENSPTRG00000017636	CNOT6	100	94.794	ENSODEG00000007041	CNOT6	100	94.794	Octodon_degus
ENSPTRG00000017636	CNOT6	75	85.343	ENSONIG00000013027	cnot6b	99	85.343	Oreochromis_niloticus
ENSPTRG00000017636	CNOT6	100	94.973	ENSOANG00000010226	CNOT6	100	94.973	Ornithorhynchus_anatinus
ENSPTRG00000017636	CNOT6	100	96.243	ENSOCUG00000011083	CNOT6	100	96.243	Oryctolagus_cuniculus
ENSPTRG00000017636	CNOT6	100	85.152	ENSORLG00000005059	cnot6b	100	85.152	Oryzias_latipes
ENSPTRG00000017636	CNOT6	100	85.152	ENSORLG00020012784	cnot6b	100	85.152	Oryzias_latipes_hni
ENSPTRG00000017636	CNOT6	94	84.321	ENSORLG00015022658	cnot6b	98	84.321	Oryzias_latipes_hsok
ENSPTRG00000017636	CNOT6	100	85.331	ENSOMEG00000005295	cnot6b	100	85.331	Oryzias_melastigma
ENSPTRG00000017636	CNOT6	94	97.328	ENSOGAG00000032470	CNOT6	100	97.328	Otolemur_garnettii
ENSPTRG00000017636	CNOT6	97	96.679	ENSOARG00000001003	CNOT6	100	96.679	Ovis_aries
ENSPTRG00000017636	CNOT6	100	100.000	ENSPPAG00000032253	CNOT6	100	100.000	Pan_paniscus
ENSPTRG00000017636	CNOT6	100	97.846	ENSPPRG00000011912	CNOT6	100	97.846	Panthera_pardus
ENSPTRG00000017636	CNOT6	100	97.846	ENSPTIG00000016794	CNOT6	100	97.846	Panthera_tigris_altaica
ENSPTRG00000017636	CNOT6	100	99.641	ENSPANG00000016191	CNOT6	100	99.641	Papio_anubis
ENSPTRG00000017636	CNOT6	100	86.559	ENSPKIG00000021368	cnot6b	100	86.559	Paramormyrops_kingsleyae
ENSPTRG00000017636	CNOT6	98	95.588	ENSPSIG00000017307	CNOT6	100	95.588	Pelodiscus_sinensis
ENSPTRG00000017636	CNOT6	100	86.101	ENSPMGG00000011238	cnot6b	100	86.101	Periophthalmus_magnuspinnatus
ENSPTRG00000017636	CNOT6	100	95.512	ENSPEMG00000000627	Cnot6	100	95.512	Peromyscus_maniculatus_bairdii
ENSPTRG00000017636	CNOT6	100	95.691	ENSPCIG00000020319	CNOT6	99	95.691	Phascolarctos_cinereus
ENSPTRG00000017636	CNOT6	100	85.484	ENSPFOG00000006291	cnot6b	100	85.484	Poecilia_formosa
ENSPTRG00000017636	CNOT6	100	82.098	ENSPLAG00000008266	cnot6b	100	82.098	Poecilia_latipinna
ENSPTRG00000017636	CNOT6	100	85.663	ENSPMEG00000009091	cnot6b	100	85.663	Poecilia_mexicana
ENSPTRG00000017636	CNOT6	100	84.991	ENSPREG00000003713	cnot6b	100	84.991	Poecilia_reticulata
ENSPTRG00000017636	CNOT6	100	100.000	ENSPPYG00000016137	CNOT6	100	100.000	Pongo_abelii
ENSPTRG00000017636	CNOT6	71	96.617	ENSPCAG00000005599	-	71	96.617	Procavia_capensis
ENSPTRG00000017636	CNOT6	100	92.101	ENSPCOG00000017359	CNOT6	100	92.819	Propithecus_coquereli
ENSPTRG00000017636	CNOT6	100	92.101	ENSPVAG00000003069	CNOT6	100	92.101	Pteropus_vampyrus
ENSPTRG00000017636	CNOT6	100	84.615	ENSPNYG00000000321	cnot6b	100	85.510	Pundamilia_nyererei
ENSPTRG00000017636	CNOT6	100	86.559	ENSPNAG00000029586	cnot6a	100	86.559	Pygocentrus_nattereri
ENSPTRG00000017636	CNOT6	100	85.305	ENSPNAG00000028816	cnot6b	100	85.305	Pygocentrus_nattereri
ENSPTRG00000017636	CNOT6	100	95.332	ENSRNOG00000054891	Cnot6	100	95.332	Rattus_norvegicus
ENSPTRG00000017636	CNOT6	100	99.461	ENSRBIG00000004309	CNOT6	100	99.461	Rhinopithecus_bieti
ENSPTRG00000017636	CNOT6	100	99.461	ENSRROG00000035378	CNOT6	100	99.567	Rhinopithecus_roxellana
ENSPTRG00000017636	CNOT6	100	98.743	ENSSBOG00000030494	CNOT6	100	98.743	Saimiri_boliviensis_boliviensis
ENSPTRG00000017636	CNOT6	100	95.691	ENSSHAG00000017436	CNOT6	100	95.691	Sarcophilus_harrisii
ENSPTRG00000017636	CNOT6	100	85.663	ENSSFOG00015022383	cnot6a	96	85.663	Scleropages_formosus
ENSPTRG00000017636	CNOT6	100	87.993	ENSSFOG00015015133	CNOT6	100	87.993	Scleropages_formosus
ENSPTRG00000017636	CNOT6	100	84.615	ENSSMAG00000003084	cnot6b	100	84.615	Scophthalmus_maximus
ENSPTRG00000017636	CNOT6	100	86.404	ENSSDUG00000004151	cnot6b	100	86.404	Seriola_dumerili
ENSPTRG00000017636	CNOT6	100	85.689	ENSSLDG00000004448	cnot6b	100	86.583	Seriola_lalandi_dorsalis
ENSPTRG00000017636	CNOT6	64	75.978	ENSSARG00000012650	-	100	75.978	Sorex_araneus
ENSPTRG00000017636	CNOT6	100	94.434	ENSSPUG00000007893	CNOT6	100	94.434	Sphenodon_punctatus
ENSPTRG00000017636	CNOT6	100	86.583	ENSSPAG00000000149	cnot6b	100	86.583	Stegastes_partitus
ENSPTRG00000017636	CNOT6	100	97.127	ENSSSCG00000014009	CNOT6	100	97.186	Sus_scrofa
ENSPTRG00000017636	CNOT6	100	95.332	ENSTGUG00000001119	CNOT6	100	95.332	Taeniopygia_guttata
ENSPTRG00000017636	CNOT6	100	84.022	ENSTRUG00000002818	cnot6b	100	84.022	Takifugu_rubripes
ENSPTRG00000017636	CNOT6	100	84.381	ENSTNIG00000004443	cnot6b	99	84.381	Tetraodon_nigroviridis
ENSPTRG00000017636	CNOT6	87	67.351	ENSTBEG00000017094	-	100	67.351	Tupaia_belangeri
ENSPTRG00000017636	CNOT6	100	97.307	ENSTTRG00000009363	CNOT6	100	97.307	Tursiops_truncatus
ENSPTRG00000017636	CNOT6	77	97.669	ENSUAMG00000004579	CNOT6	88	97.669	Ursus_americanus
ENSPTRG00000017636	CNOT6	100	93.322	ENSUMAG00000024577	CNOT6	100	93.322	Ursus_maritimus
ENSPTRG00000017636	CNOT6	83	96.028	ENSVPAG00000003593	CNOT6	83	96.028	Vicugna_pacos
ENSPTRG00000017636	CNOT6	100	98.025	ENSVVUG00000026940	CNOT6	100	98.025	Vulpes_vulpes
ENSPTRG00000017636	CNOT6	100	82.459	ENSXCOG00000003360	cnot6b	100	82.459	Xiphophorus_couchianus
ENSPTRG00000017636	CNOT6	100	85.663	ENSXMAG00000008730	cnot6b	100	85.663	Xiphophorus_maculatus