EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPTRG00000017690 (Gene tree)
Gene ID: 471844
Gene Symbol: RPP40
Alias: -
Full Name: ribonuclease P/MRP 40 subunit
Gene Type: protein_coding
Species: Pan_troglodytes
Status: putative
Strand: Minus strand
Length: 8958 bases
Position: chr6:5002527-5011484
Accession: 3688
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTRP00000087889	Ribonuc_P_40	PF08584.11	1.9e-94	1	1
ENSPTRP00000043103	Ribonuc_P_40	PF08584.11	8.5e-78	1	1
ENSPTRP00000088359	Ribonuc_P_40	PF08584.11	2e-74	1	2
ENSPTRP00000088359	Ribonuc_P_40	PF08584.11	2e-74	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTRT00000091654	-	1509	XM_009450448	ENSPTRP00000087889	363 (aa)	XP_009448723	K7BNM5
ENSPTRT00000045317	-	1023	-	ENSPTRP00000043103	340 (aa)	-	H2R1Y8
ENSPTRT00000102686	-	966	-	ENSPTRP00000088359	321 (aa)	-	A0A2I3THL5

Gene Model

Click here to download ENSPTRG00000017690's gene model file

Pathways

Pathway ID	Pathway Name	Source
ptr03008	Ribosome biogenesis in eukaryotes	KEGG
ptr03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000017690's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTRG00000017690	RPP40	100	98.442	ENSG00000124787	RPP40	100	98.442	Homo_sapiens
ENSPTRG00000017690	RPP40	88	32.107	ENSAPOG00000008660	rpp40	92	32.107	Acanthochromis_polyacanthus
ENSPTRG00000017690	RPP40	100	86.501	ENSAMEG00000012938	RPP40	100	86.501	Ailuropoda_melanoleuca
ENSPTRG00000017690	RPP40	98	36.464	ENSACIG00000003617	rpp40	98	36.464	Amphilophus_citrinellus
ENSPTRG00000017690	RPP40	98	37.535	ENSAOCG00000011846	rpp40	99	37.535	Amphiprion_ocellaris
ENSPTRG00000017690	RPP40	98	37.535	ENSAPEG00000001322	rpp40	99	37.535	Amphiprion_percula
ENSPTRG00000017690	RPP40	98	38.162	ENSATEG00000006584	rpp40	99	38.162	Anabas_testudineus
ENSPTRG00000017690	RPP40	83	67.000	ENSAPLG00000005691	RPP40	99	67.000	Anas_platyrhynchos
ENSPTRG00000017690	RPP40	99	62.953	ENSACAG00000006550	RPP40	88	62.953	Anolis_carolinensis
ENSPTRG00000017690	RPP40	100	95.041	ENSANAG00000029246	RPP40	100	95.041	Aotus_nancymaae
ENSPTRG00000017690	RPP40	98	38.310	ENSACLG00000015883	rpp40	96	38.310	Astatotilapia_calliptera
ENSPTRG00000017690	RPP40	98	48.459	ENSAMXG00000001755	rpp40	99	48.459	Astyanax_mexicanus
ENSPTRG00000017690	RPP40	100	82.645	ENSBTAG00000003332	RPP40	100	82.645	Bos_taurus
ENSPTRG00000017690	RPP40	100	95.327	ENSCJAG00000021373	RPP40	100	95.327	Callithrix_jacchus
ENSPTRG00000017690	RPP40	100	85.950	ENSCAFG00000009435	RPP40	100	85.950	Canis_familiaris
ENSPTRG00000017690	RPP40	100	85.950	ENSCAFG00020013380	RPP40	100	85.950	Canis_lupus_dingo
ENSPTRG00000017690	RPP40	100	82.369	ENSCHIG00000016849	RPP40	100	82.369	Capra_hircus
ENSPTRG00000017690	RPP40	100	88.785	ENSTSYG00000032857	RPP40	100	89.109	Carlito_syrichta
ENSPTRG00000017690	RPP40	90	77.982	ENSCAPG00000004957	RPP40	98	77.982	Cavia_aperea
ENSPTRG00000017690	RPP40	100	84.848	ENSCPOG00000005855	RPP40	100	84.848	Cavia_porcellus
ENSPTRG00000017690	RPP40	100	95.592	ENSCCAG00000019809	RPP40	100	95.592	Cebus_capucinus
ENSPTRG00000017690	RPP40	100	95.639	ENSCATG00000038787	RPP40	100	95.639	Cercocebus_atys
ENSPTRG00000017690	RPP40	100	84.298	ENSCLAG00000003235	RPP40	100	84.298	Chinchilla_lanigera
ENSPTRG00000017690	RPP40	100	95.868	ENSCSAG00000007307	RPP40	100	95.868	Chlorocebus_sabaeus
ENSPTRG00000017690	RPP40	74	68.400	ENSCHOG00000005856	-	100	68.400	Choloepus_hoffmanni
ENSPTRG00000017690	RPP40	99	69.722	ENSCPBG00000009003	RPP40	99	69.722	Chrysemys_picta_bellii
ENSPTRG00000017690	RPP40	100	96.573	ENSCANG00000033965	RPP40	100	96.573	Colobus_angolensis_palliatus
ENSPTRG00000017690	RPP40	100	79.063	ENSCGRG00001018328	Rpp40	100	79.063	Cricetulus_griseus_chok1gshd
ENSPTRG00000017690	RPP40	100	79.063	ENSCGRG00000011344	Rpp40	100	79.063	Cricetulus_griseus_crigri
ENSPTRG00000017690	RPP40	98	36.517	ENSCSEG00000015006	-	98	36.517	Cynoglossus_semilaevis
ENSPTRG00000017690	RPP40	74	33.453	ENSCVAG00000012169	rpp40	100	33.453	Cyprinodon_variegatus
ENSPTRG00000017690	RPP40	98	50.000	ENSDARG00000017605	rpp40	99	50.000	Danio_rerio
ENSPTRG00000017690	RPP40	82	82.492	ENSDNOG00000048136	RPP40	99	82.492	Dasypus_novemcinctus
ENSPTRG00000017690	RPP40	100	63.559	ENSDORG00000011196	-	100	63.559	Dipodomys_ordii
ENSPTRG00000017690	RPP40	100	82.920	ENSDORG00000029944	-	100	82.920	Dipodomys_ordii
ENSPTRG00000017690	RPP40	90	79.817	ENSETEG00000007458	RPP40	100	66.116	Echinops_telfairi
ENSPTRG00000017690	RPP40	98	43.944	ENSEBUG00000000386	rpp40	99	43.944	Eptatretus_burgeri
ENSPTRG00000017690	RPP40	100	87.879	ENSEASG00005012116	RPP40	80	87.879	Equus_asinus_asinus
ENSPTRG00000017690	RPP40	100	88.154	ENSECAG00000017247	RPP40	80	88.154	Equus_caballus
ENSPTRG00000017690	RPP40	68	82.927	ENSEEUG00000012087	RPP40	100	65.993	Erinaceus_europaeus
ENSPTRG00000017690	RPP40	98	48.324	ENSELUG00000017004	rpp40	99	48.324	Esox_lucius
ENSPTRG00000017690	RPP40	100	87.328	ENSFCAG00000009249	RPP40	100	87.328	Felis_catus
ENSPTRG00000017690	RPP40	86	65.138	ENSFALG00000013166	RPP40	100	65.138	Ficedula_albicollis
ENSPTRG00000017690	RPP40	80	70.103	ENSFDAG00000000265	-	99	70.103	Fukomys_damarensis
ENSPTRG00000017690	RPP40	100	86.501	ENSFDAG00000013001	-	100	86.501	Fukomys_damarensis
ENSPTRG00000017690	RPP40	98	39.216	ENSFHEG00000021429	rpp40	88	39.216	Fundulus_heteroclitus
ENSPTRG00000017690	RPP40	87	43.929	ENSGMOG00000018653	rpp40	100	43.929	Gadus_morhua
ENSPTRG00000017690	RPP40	99	65.833	ENSGALG00000036074	RPP40	99	65.833	Gallus_gallus
ENSPTRG00000017690	RPP40	82	34.228	ENSGAFG00000004189	-	98	34.228	Gambusia_affinis
ENSPTRG00000017690	RPP40	98	38.095	ENSGACG00000002472	rpp40	99	38.095	Gasterosteus_aculeatus
ENSPTRG00000017690	RPP40	99	69.722	ENSGAGG00000012918	RPP40	99	69.722	Gopherus_agassizii
ENSPTRG00000017690	RPP40	100	98.235	ENSGGOG00000013764	RPP40	100	98.235	Gorilla_gorilla
ENSPTRG00000017690	RPP40	90	37.615	ENSHBUG00000009378	rpp40	93	37.615	Haplochromis_burtoni
ENSPTRG00000017690	RPP40	100	85.950	ENSHGLG00000004871	RPP40	100	85.950	Heterocephalus_glaber_female
ENSPTRG00000017690	RPP40	100	85.950	ENSHGLG00100002080	RPP40	100	85.950	Heterocephalus_glaber_male
ENSPTRG00000017690	RPP40	97	30.878	ENSHCOG00000013264	-	94	30.878	Hippocampus_comes
ENSPTRG00000017690	RPP40	99	48.056	ENSIPUG00000008951	RPP40	99	48.056	Ictalurus_punctatus
ENSPTRG00000017690	RPP40	100	85.399	ENSSTOG00000011199	RPP40	100	85.399	Ictidomys_tridecemlineatus
ENSPTRG00000017690	RPP40	100	79.118	ENSJJAG00000020629	Rpp40	100	79.118	Jaculus_jaculus
ENSPTRG00000017690	RPP40	98	36.975	ENSKMAG00000019358	rpp40	99	36.975	Kryptolebias_marmoratus
ENSPTRG00000017690	RPP40	98	39.496	ENSLBEG00000022724	rpp40	99	39.496	Labrus_bergylta
ENSPTRG00000017690	RPP40	99	58.611	ENSLACG00000014848	RPP40	99	58.611	Latimeria_chalumnae
ENSPTRG00000017690	RPP40	100	53.444	ENSLOCG00000011650	rpp40	100	53.444	Lepisosteus_oculatus
ENSPTRG00000017690	RPP40	83	84.488	ENSLAFG00000007530	RPP40	100	84.488	Loxodonta_africana
ENSPTRG00000017690	RPP40	100	95.882	ENSMFAG00000043100	RPP40	100	95.882	Macaca_fascicularis
ENSPTRG00000017690	RPP40	100	96.176	ENSMMUG00000004966	RPP40	100	96.176	Macaca_mulatta
ENSPTRG00000017690	RPP40	100	96.471	ENSMNEG00000041986	RPP40	100	96.471	Macaca_nemestrina
ENSPTRG00000017690	RPP40	98	86.269	ENSMLEG00000040851	RPP40	100	93.750	Mandrillus_leucophaeus
ENSPTRG00000017690	RPP40	98	38.655	ENSMAMG00000019551	rpp40	98	38.655	Mastacembelus_armatus
ENSPTRG00000017690	RPP40	99	38.781	ENSMZEG00005019475	rpp40	99	38.781	Maylandia_zebra
ENSPTRG00000017690	RPP40	99	62.222	ENSMGAG00000004009	RPP40	99	62.222	Meleagris_gallopavo
ENSPTRG00000017690	RPP40	100	83.529	ENSMAUG00000010268	Rpp40	100	83.529	Mesocricetus_auratus
ENSPTRG00000017690	RPP40	100	87.850	ENSMICG00000003297	RPP40	100	87.850	Microcebus_murinus
ENSPTRG00000017690	RPP40	100	83.235	ENSMOCG00000000305	Rpp40	100	83.235	Microtus_ochrogaster
ENSPTRG00000017690	RPP40	98	34.615	ENSMMOG00000020591	-	99	34.615	Mola_mola
ENSPTRG00000017690	RPP40	100	80.495	ENSMODG00000009826	RPP40	100	80.495	Monodelphis_domestica
ENSPTRG00000017690	RPP40	98	38.730	ENSMALG00000020133	rpp40	99	38.095	Monopterus_albus
ENSPTRG00000017690	RPP40	100	83.196	MGP_CAROLIEiJ_G0018429	Rpp40	100	83.196	Mus_caroli
ENSPTRG00000017690	RPP40	100	83.747	ENSMUSG00000021418	Rpp40	100	83.747	Mus_musculus
ENSPTRG00000017690	RPP40	100	83.235	MGP_PahariEiJ_G0019497	Rpp40	100	83.235	Mus_pahari
ENSPTRG00000017690	RPP40	100	83.196	MGP_SPRETEiJ_G0019309	Rpp40	100	83.196	Mus_spretus
ENSPTRG00000017690	RPP40	100	85.950	ENSMPUG00000000530	RPP40	93	85.950	Mustela_putorius_furo
ENSPTRG00000017690	RPP40	100	84.298	ENSMLUG00000000501	RPP40	100	84.298	Myotis_lucifugus
ENSPTRG00000017690	RPP40	100	85.124	ENSNGAG00000023955	-	100	85.124	Nannospalax_galili
ENSPTRG00000017690	RPP40	95	76.301	ENSNGAG00000022529	-	100	76.301	Nannospalax_galili
ENSPTRG00000017690	RPP40	87	36.667	ENSNBRG00000017465	rpp40	86	36.842	Neolamprologus_brichardi
ENSPTRG00000017690	RPP40	100	96.176	ENSNLEG00000034397	RPP40	100	96.176	Nomascus_leucogenys
ENSPTRG00000017690	RPP40	100	74.105	ENSMEUG00000005300	RPP40	100	74.105	Notamacropus_eugenii
ENSPTRG00000017690	RPP40	100	79.063	ENSODEG00000018153	-	100	79.063	Octodon_degus
ENSPTRG00000017690	RPP40	100	83.471	ENSODEG00000007255	-	100	83.471	Octodon_degus
ENSPTRG00000017690	RPP40	88	82.943	ENSODEG00000006170	-	100	82.943	Octodon_degus
ENSPTRG00000017690	RPP40	99	38.781	ENSONIG00000014016	rpp40	99	38.781	Oreochromis_niloticus
ENSPTRG00000017690	RPP40	83	72.937	ENSOANG00000001200	RPP40	99	72.937	Ornithorhynchus_anatinus
ENSPTRG00000017690	RPP40	99	75.900	ENSOCUG00000000354	RPP40	99	75.900	Oryctolagus_cuniculus
ENSPTRG00000017690	RPP40	99	37.500	ENSORLG00000008242	-	100	37.500	Oryzias_latipes
ENSPTRG00000017690	RPP40	99	36.667	ENSORLG00020013745	-	91	36.667	Oryzias_latipes_hni
ENSPTRG00000017690	RPP40	99	37.222	ENSORLG00015000887	-	100	37.222	Oryzias_latipes_hsok
ENSPTRG00000017690	RPP40	99	37.673	ENSOMEG00000002747	rpp40	100	37.673	Oryzias_melastigma
ENSPTRG00000017690	RPP40	100	88.430	ENSOGAG00000006055	RPP40	100	88.430	Otolemur_garnettii
ENSPTRG00000017690	RPP40	91	79.580	ENSOARG00000018783	RPP40	100	81.188	Ovis_aries
ENSPTRG00000017690	RPP40	100	99.174	ENSPPAG00000023703	RPP40	100	99.174	Pan_paniscus
ENSPTRG00000017690	RPP40	100	87.052	ENSPPRG00000005612	RPP40	100	87.052	Panthera_pardus
ENSPTRG00000017690	RPP40	100	80.441	ENSPTIG00000018847	RPP40	100	80.441	Panthera_tigris_altaica
ENSPTRG00000017690	RPP40	100	95.950	ENSPANG00000017865	RPP40	100	95.950	Papio_anubis
ENSPTRG00000017690	RPP40	98	49.721	ENSPKIG00000006311	rpp40	99	49.721	Paramormyrops_kingsleyae
ENSPTRG00000017690	RPP40	65	70.721	ENSPSIG00000007854	RPP40	100	70.721	Pelodiscus_sinensis
ENSPTRG00000017690	RPP40	92	77.070	ENSPEMG00000020809	Rpp40	91	77.070	Peromyscus_maniculatus_bairdii
ENSPTRG00000017690	RPP40	81	41.367	ENSPMAG00000008412	rpp40	99	45.620	Petromyzon_marinus
ENSPTRG00000017690	RPP40	100	80.165	ENSPCIG00000010682	RPP40	100	80.165	Phascolarctos_cinereus
ENSPTRG00000017690	RPP40	98	35.097	ENSPFOG00000011460	rpp40	98	35.097	Poecilia_formosa
ENSPTRG00000017690	RPP40	98	35.574	ENSPLAG00000001334	rpp40	99	35.574	Poecilia_latipinna
ENSPTRG00000017690	RPP40	98	35.294	ENSPMEG00000007721	rpp40	99	35.294	Poecilia_mexicana
ENSPTRG00000017690	RPP40	98	36.415	ENSPREG00000009215	rpp40	99	36.415	Poecilia_reticulata
ENSPTRG00000017690	RPP40	100	97.521	ENSPPYG00000016194	RPP40	100	97.521	Pongo_abelii
ENSPTRG00000017690	RPP40	51	84.239	ENSPCAG00000002700	-	99	84.239	Procavia_capensis
ENSPTRG00000017690	RPP40	100	89.097	ENSPCOG00000003907	RPP40	100	89.097	Propithecus_coquereli
ENSPTRG00000017690	RPP40	100	88.154	ENSPVAG00000011325	RPP40	100	88.154	Pteropus_vampyrus
ENSPTRG00000017690	RPP40	83	37.086	ENSPNYG00000004432	rpp40	99	37.086	Pundamilia_nyererei
ENSPTRG00000017690	RPP40	98	47.207	ENSPNAG00000019125	rpp40	99	47.207	Pygocentrus_nattereri
ENSPTRG00000017690	RPP40	100	83.471	ENSRNOG00000016226	Rpp40	100	83.471	Rattus_norvegicus
ENSPTRG00000017690	RPP40	100	96.885	ENSRBIG00000035800	RPP40	100	96.885	Rhinopithecus_bieti
ENSPTRG00000017690	RPP40	100	96.885	ENSRROG00000039116	RPP40	100	96.885	Rhinopithecus_roxellana
ENSPTRG00000017690	RPP40	100	95.317	ENSSBOG00000020297	RPP40	100	95.317	Saimiri_boliviensis_boliviensis
ENSPTRG00000017690	RPP40	77	79.137	ENSSHAG00000002102	RPP40	100	79.137	Sarcophilus_harrisii
ENSPTRG00000017690	RPP40	99	48.209	ENSSFOG00015001142	rpp40	81	48.209	Scleropages_formosus
ENSPTRG00000017690	RPP40	98	36.975	ENSSDUG00000007202	rpp40	99	36.975	Seriola_dumerili
ENSPTRG00000017690	RPP40	98	37.255	ENSSLDG00000017563	rpp40	99	37.255	Seriola_lalandi_dorsalis
ENSPTRG00000017690	RPP40	99	66.667	ENSSPUG00000017487	-	99	66.667	Sphenodon_punctatus
ENSPTRG00000017690	RPP40	81	65.085	ENSSPUG00000018950	-	100	65.085	Sphenodon_punctatus
ENSPTRG00000017690	RPP40	98	38.936	ENSSPAG00000022716	rpp40	99	38.936	Stegastes_partitus
ENSPTRG00000017690	RPP40	100	81.308	ENSSSCG00000000998	RPP40	100	81.308	Sus_scrofa
ENSPTRG00000017690	RPP40	55	70.621	ENSTGUG00000015246	-	100	71.186	Taeniopygia_guttata
ENSPTRG00000017690	RPP40	99	65.922	ENSTGUG00000002258	-	100	65.922	Taeniopygia_guttata
ENSPTRG00000017690	RPP40	97	39.093	ENSTRUG00000003755	rpp40	98	39.093	Takifugu_rubripes
ENSPTRG00000017690	RPP40	97	37.110	ENSTNIG00000003077	rpp40	98	37.110	Tetraodon_nigroviridis
ENSPTRG00000017690	RPP40	74	61.600	ENSTBEG00000014467	-	73	61.600	Tupaia_belangeri
ENSPTRG00000017690	RPP40	99	76.519	ENSTTRG00000007319	RPP40	100	76.519	Tursiops_truncatus
ENSPTRG00000017690	RPP40	100	87.052	ENSUAMG00000002159	RPP40	100	87.052	Ursus_americanus
ENSPTRG00000017690	RPP40	100	87.052	ENSUMAG00000018639	RPP40	94	87.052	Ursus_maritimus
ENSPTRG00000017690	RPP40	81	61.905	ENSVPAG00000004652	-	99	61.905	Vicugna_pacos
ENSPTRG00000017690	RPP40	100	85.950	ENSVVUG00000005451	RPP40	100	85.950	Vulpes_vulpes
ENSPTRG00000017690	RPP40	99	55.616	ENSXETG00000017617	rpp40	100	55.616	Xenopus_tropicalis
ENSPTRG00000017690	RPP40	63	42.520	ENSXCOG00000019991	-	93	30.539	Xiphophorus_couchianus
ENSPTRG00000017690	RPP40	98	31.024	ENSXMAG00000024940	rpp40	98	31.024	Xiphophorus_maculatus