EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPTRG00000017700 (Gene tree)
Gene ID: 471847
Gene Symbol: RIOK1
Alias: -
Full Name: RIO kinase 1
Gene Type: protein_coding
Species: Pan_troglodytes
Status: putative
Strand: Plus strand
Length: 28265 bases
Position: chr6:7430438-7458702
Accession: 11207
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTRP00000030220	RIO1	PF01163.22	1.4e-77	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTRT00000032710	-	2506	XM_009450462	ENSPTRP00000030220	568 (aa)	XP_009448737	H2QS96

Gene Model

Click here to download ENSPTRG00000017700's gene model file

Pathways

Pathway ID	Pathway Name	Source
ptr03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000017700's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPTRG00000017700	RIOK1	53	43.450	ENSPTRG00000009918	RIOK3	57	46.304

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTRG00000017700	RIOK1	100	98.768	ENSG00000124784	RIOK1	100	98.768	Homo_sapiens
ENSPTRG00000017700	RIOK1	57	66.975	ENSAPOG00000015632	riok1	99	66.975	Acanthochromis_polyacanthus
ENSPTRG00000017700	RIOK1	100	89.631	ENSAMEG00000017367	RIOK1	100	88.928	Ailuropoda_melanoleuca
ENSPTRG00000017700	RIOK1	88	71.058	ENSACIG00000003735	riok1	87	71.951	Amphilophus_citrinellus
ENSPTRG00000017700	RIOK1	99	66.488	ENSAOCG00000011818	riok1	100	66.608	Amphiprion_ocellaris
ENSPTRG00000017700	RIOK1	99	66.963	ENSAPEG00000001345	riok1	100	66.667	Amphiprion_percula
ENSPTRG00000017700	RIOK1	82	71.490	ENSATEG00000006594	riok1	99	71.490	Anabas_testudineus
ENSPTRG00000017700	RIOK1	84	82.563	ENSAPLG00000004196	RIOK1	100	83.403	Anas_platyrhynchos
ENSPTRG00000017700	RIOK1	100	77.193	ENSACAG00000000695	RIOK1	100	76.316	Anolis_carolinensis
ENSPTRG00000017700	RIOK1	100	86.972	ENSANAG00000023777	RIOK1	100	86.972	Aotus_nancymaae
ENSPTRG00000017700	RIOK1	99	66.667	ENSACLG00000015799	riok1	99	66.489	Astatotilapia_calliptera
ENSPTRG00000017700	RIOK1	99	68.268	ENSAMXG00000015286	riok1	84	75.556	Astyanax_mexicanus
ENSPTRG00000017700	RIOK1	100	88.556	ENSBTAG00000013821	RIOK1	100	88.556	Bos_taurus
ENSPTRG00000017700	RIOK1	78	47.577	WBGene00019698	riok-1	77	49.524	Caenorhabditis_elegans
ENSPTRG00000017700	RIOK1	100	96.303	ENSCJAG00000042960	RIOK1	100	96.303	Callithrix_jacchus
ENSPTRG00000017700	RIOK1	100	88.576	ENSCAFG00000009563	RIOK1	100	88.576	Canis_familiaris
ENSPTRG00000017700	RIOK1	97	85.844	ENSCAFG00020013233	RIOK1	98	86.496	Canis_lupus_dingo
ENSPTRG00000017700	RIOK1	100	87.500	ENSCHIG00000001534	RIOK1	100	87.500	Capra_hircus
ENSPTRG00000017700	RIOK1	66	89.920	ENSTSYG00000011368	RIOK1	100	93.272	Carlito_syrichta
ENSPTRG00000017700	RIOK1	79	89.556	ENSCAPG00000008489	RIOK1	100	89.655	Cavia_aperea
ENSPTRG00000017700	RIOK1	98	86.511	ENSCPOG00000009882	RIOK1	100	87.018	Cavia_porcellus
ENSPTRG00000017700	RIOK1	100	96.831	ENSCCAG00000024061	RIOK1	100	96.831	Cebus_capucinus
ENSPTRG00000017700	RIOK1	100	96.655	ENSCATG00000001548	RIOK1	100	96.655	Cercocebus_atys
ENSPTRG00000017700	RIOK1	100	91.037	ENSCLAG00000003522	RIOK1	100	91.037	Chinchilla_lanigera
ENSPTRG00000017700	RIOK1	94	95.489	ENSCSAG00000007396	RIOK1	98	95.489	Chlorocebus_sabaeus
ENSPTRG00000017700	RIOK1	85	79.874	ENSCHOG00000001873	RIOK1	85	79.874	Choloepus_hoffmanni
ENSPTRG00000017700	RIOK1	94	75.797	ENSCPBG00000008685	RIOK1	91	75.926	Chrysemys_picta_bellii
ENSPTRG00000017700	RIOK1	100	96.655	ENSCANG00000032919	RIOK1	100	96.655	Colobus_angolensis_palliatus
ENSPTRG00000017700	RIOK1	100	81.898	ENSCGRG00001018868	Riok1	100	80.986	Cricetulus_griseus_chok1gshd
ENSPTRG00000017700	RIOK1	100	81.898	ENSCGRG00000008015	Riok1	100	80.986	Cricetulus_griseus_crigri
ENSPTRG00000017700	RIOK1	88	50.895	ENSCSEG00000015014	riok1	86	51.210	Cynoglossus_semilaevis
ENSPTRG00000017700	RIOK1	57	64.724	ENSCVAG00000011291	riok1	99	64.724	Cyprinodon_variegatus
ENSPTRG00000017700	RIOK1	99	68.794	ENSDARG00000016399	riok1	100	69.149	Danio_rerio
ENSPTRG00000017700	RIOK1	100	86.736	ENSDNOG00000015813	RIOK1	100	86.736	Dasypus_novemcinctus
ENSPTRG00000017700	RIOK1	100	89.649	ENSDORG00000008530	Riok1	100	89.649	Dipodomys_ordii
ENSPTRG00000017700	RIOK1	77	53.540	FBgn0036187	RIOK1	82	52.941	Drosophila_melanogaster
ENSPTRG00000017700	RIOK1	100	85.211	ENSETEG00000020273	RIOK1	100	85.387	Echinops_telfairi
ENSPTRG00000017700	RIOK1	99	62.191	ENSEBUG00000013672	riok1	86	67.886	Eptatretus_burgeri
ENSPTRG00000017700	RIOK1	94	88.910	ENSEASG00005012032	RIOK1	94	88.910	Equus_asinus_asinus
ENSPTRG00000017700	RIOK1	100	89.261	ENSECAG00000009007	RIOK1	100	89.261	Equus_caballus
ENSPTRG00000017700	RIOK1	77	75.000	ENSEEUG00000007123	RIOK1	100	75.000	Erinaceus_europaeus
ENSPTRG00000017700	RIOK1	99	65.088	ENSELUG00000017029	riok1	99	63.993	Esox_lucius
ENSPTRG00000017700	RIOK1	100	87.762	ENSFCAG00000027290	RIOK1	100	87.413	Felis_catus
ENSPTRG00000017700	RIOK1	100	77.193	ENSFALG00000013244	RIOK1	100	77.352	Ficedula_albicollis
ENSPTRG00000017700	RIOK1	100	88.576	ENSFDAG00000019139	RIOK1	100	88.576	Fukomys_damarensis
ENSPTRG00000017700	RIOK1	66	76.923	ENSFHEG00000021419	riok1	83	76.923	Fundulus_heteroclitus
ENSPTRG00000017700	RIOK1	73	70.048	ENSGMOG00000018668	riok1	92	72.010	Gadus_morhua
ENSPTRG00000017700	RIOK1	58	76.147	ENSGALG00000012795	RIOK1	100	77.992	Gallus_gallus
ENSPTRG00000017700	RIOK1	91	57.611	ENSGAFG00000004091	riok1	79	61.746	Gambusia_affinis
ENSPTRG00000017700	RIOK1	97	64.791	ENSGACG00000002496	riok1	94	72.561	Gasterosteus_aculeatus
ENSPTRG00000017700	RIOK1	82	77.634	ENSGAGG00000002262	RIOK1	98	79.140	Gopherus_agassizii
ENSPTRG00000017700	RIOK1	100	83.275	ENSGGOG00000011037	RIOK1	100	83.275	Gorilla_gorilla
ENSPTRG00000017700	RIOK1	100	84.534	ENSHGLG00000008699	RIOK1	100	84.710	Heterocephalus_glaber_female
ENSPTRG00000017700	RIOK1	100	84.886	ENSHGLG00100008188	RIOK1	100	85.062	Heterocephalus_glaber_male
ENSPTRG00000017700	RIOK1	88	69.763	ENSHCOG00000013275	riok1	90	70.741	Hippocampus_comes
ENSPTRG00000017700	RIOK1	99	70.209	ENSIPUG00000003290	riok1	100	69.512	Ictalurus_punctatus
ENSPTRG00000017700	RIOK1	100	90.334	ENSSTOG00000009289	RIOK1	100	90.334	Ictidomys_tridecemlineatus
ENSPTRG00000017700	RIOK1	100	86.444	ENSJJAG00000015152	Riok1	100	86.444	Jaculus_jaculus
ENSPTRG00000017700	RIOK1	68	75.321	ENSKMAG00000019378	riok1	99	75.321	Kryptolebias_marmoratus
ENSPTRG00000017700	RIOK1	88	71.058	ENSLBEG00000016650	riok1	86	71.660	Labrus_bergylta
ENSPTRG00000017700	RIOK1	100	67.133	ENSLACG00000000300	RIOK1	100	67.422	Latimeria_chalumnae
ENSPTRG00000017700	RIOK1	99	69.665	ENSLOCG00000011728	riok1	99	71.530	Lepisosteus_oculatus
ENSPTRG00000017700	RIOK1	99	87.011	ENSLAFG00000005504	RIOK1	100	87.011	Loxodonta_africana
ENSPTRG00000017700	RIOK1	100	96.655	ENSMFAG00000029990	RIOK1	100	96.655	Macaca_fascicularis
ENSPTRG00000017700	RIOK1	100	96.479	ENSMMUG00000015577	RIOK1	100	96.479	Macaca_mulatta
ENSPTRG00000017700	RIOK1	100	93.134	ENSMNEG00000034396	RIOK1	99	95.474	Macaca_nemestrina
ENSPTRG00000017700	RIOK1	100	96.655	ENSMLEG00000026327	RIOK1	100	96.655	Mandrillus_leucophaeus
ENSPTRG00000017700	RIOK1	98	66.308	ENSMAMG00000019557	riok1	88	72.727	Mastacembelus_armatus
ENSPTRG00000017700	RIOK1	99	66.489	ENSMZEG00005019482	riok1	99	66.667	Maylandia_zebra
ENSPTRG00000017700	RIOK1	100	74.035	ENSMGAG00000003816	RIOK1	100	74.737	Meleagris_gallopavo
ENSPTRG00000017700	RIOK1	100	83.128	ENSMAUG00000012751	Riok1	100	82.042	Mesocricetus_auratus
ENSPTRG00000017700	RIOK1	100	91.901	ENSMICG00000044301	RIOK1	84	91.901	Microcebus_murinus
ENSPTRG00000017700	RIOK1	100	80.844	ENSMOCG00000017032	Riok1	100	80.106	Microtus_ochrogaster
ENSPTRG00000017700	RIOK1	84	62.868	ENSMMOG00000020598	riok1	87	63.261	Mola_mola
ENSPTRG00000017700	RIOK1	100	78.087	ENSMODG00000009964	RIOK1	100	78.066	Monodelphis_domestica
ENSPTRG00000017700	RIOK1	84	66.038	ENSMALG00000019982	riok1	92	64.286	Monopterus_albus
ENSPTRG00000017700	RIOK1	99	80.783	MGP_CAROLIEiJ_G0018439	Riok1	99	80.749	Mus_caroli
ENSPTRG00000017700	RIOK1	99	79.823	ENSMUSG00000021428	Riok1	99	80.427	Mus_musculus
ENSPTRG00000017700	RIOK1	99	80.570	MGP_PahariEiJ_G0019507	Riok1	99	80.214	Mus_pahari
ENSPTRG00000017700	RIOK1	99	80.249	MGP_SPRETEiJ_G0019319	Riok1	99	80.570	Mus_spretus
ENSPTRG00000017700	RIOK1	100	86.515	ENSMPUG00000000570	RIOK1	100	86.515	Mustela_putorius_furo
ENSPTRG00000017700	RIOK1	100	90.158	ENSMLUG00000015312	RIOK1	100	89.455	Myotis_lucifugus
ENSPTRG00000017700	RIOK1	100	87.676	ENSNGAG00000021734	Riok1	100	88.028	Nannospalax_galili
ENSPTRG00000017700	RIOK1	74	74.941	ENSNBRG00000017489	riok1	83	72.360	Neolamprologus_brichardi
ENSPTRG00000017700	RIOK1	100	87.676	ENSNLEG00000011621	RIOK1	100	87.676	Nomascus_leucogenys
ENSPTRG00000017700	RIOK1	84	53.151	ENSMEUG00000006679	-	84	54.412	Notamacropus_eugenii
ENSPTRG00000017700	RIOK1	65	84.367	ENSOPRG00000009524	RIOK1	100	84.367	Ochotona_princeps
ENSPTRG00000017700	RIOK1	71	77.057	ENSODEG00000005663	RIOK1	100	77.057	Octodon_degus
ENSPTRG00000017700	RIOK1	98	67.979	ENSONIG00000014010	riok1	98	67.616	Oreochromis_niloticus
ENSPTRG00000017700	RIOK1	82	86.207	ENSOANG00000012553	RIOK1	100	86.207	Ornithorhynchus_anatinus
ENSPTRG00000017700	RIOK1	100	87.873	ENSOCUG00000011824	RIOK1	100	87.873	Oryctolagus_cuniculus
ENSPTRG00000017700	RIOK1	98	66.250	ENSORLG00000008221	riok1	86	73.651	Oryzias_latipes
ENSPTRG00000017700	RIOK1	98	64.865	ENSORLG00020013838	riok1	60	71.816	Oryzias_latipes_hni
ENSPTRG00000017700	RIOK1	98	65.893	ENSORLG00015009817	riok1	86	73.805	Oryzias_latipes_hsok
ENSPTRG00000017700	RIOK1	98	65.530	ENSOMEG00000002758	riok1	78	72.557	Oryzias_melastigma
ENSPTRG00000017700	RIOK1	100	79.756	ENSOGAG00000010192	RIOK1	100	79.756	Otolemur_garnettii
ENSPTRG00000017700	RIOK1	100	88.028	ENSOARG00000017747	RIOK1	100	88.028	Ovis_aries
ENSPTRG00000017700	RIOK1	100	89.631	ENSPPAG00000016349	RIOK1	100	96.636	Pan_paniscus
ENSPTRG00000017700	RIOK1	100	87.937	ENSPPRG00000001932	RIOK1	100	87.587	Panthera_pardus
ENSPTRG00000017700	RIOK1	100	88.112	ENSPTIG00000018545	RIOK1	100	87.762	Panthera_tigris_altaica
ENSPTRG00000017700	RIOK1	100	96.655	ENSPANG00000016522	RIOK1	100	96.655	Papio_anubis
ENSPTRG00000017700	RIOK1	99	68.301	ENSPKIG00000006442	riok1	100	68.028	Paramormyrops_kingsleyae
ENSPTRG00000017700	RIOK1	100	77.113	ENSPSIG00000006488	RIOK1	99	77.329	Pelodiscus_sinensis
ENSPTRG00000017700	RIOK1	70	71.358	ENSPMGG00000017807	riok1	96	68.889	Periophthalmus_magnuspinnatus
ENSPTRG00000017700	RIOK1	100	82.777	ENSPEMG00000017844	Riok1	100	81.690	Peromyscus_maniculatus_bairdii
ENSPTRG00000017700	RIOK1	57	79.077	ENSPMAG00000006351	riok1	77	79.077	Petromyzon_marinus
ENSPTRG00000017700	RIOK1	94	77.196	ENSPCIG00000012653	RIOK1	94	77.298	Phascolarctos_cinereus
ENSPTRG00000017700	RIOK1	98	62.118	ENSPFOG00000011532	riok1	87	69.439	Poecilia_formosa
ENSPTRG00000017700	RIOK1	98	61.939	ENSPLAG00000001341	riok1	87	69.439	Poecilia_latipinna
ENSPTRG00000017700	RIOK1	98	62.118	ENSPMEG00000007710	riok1	89	69.439	Poecilia_mexicana
ENSPTRG00000017700	RIOK1	98	61.939	ENSPREG00000009237	riok1	87	69.602	Poecilia_reticulata
ENSPTRG00000017700	RIOK1	100	98.243	ENSPPYG00000016207	RIOK1	100	98.243	Pongo_abelii
ENSPTRG00000017700	RIOK1	100	73.768	ENSPCAG00000007892	RIOK1	100	74.648	Procavia_capensis
ENSPTRG00000017700	RIOK1	100	91.243	ENSPVAG00000014091	RIOK1	100	89.667	Pteropus_vampyrus
ENSPTRG00000017700	RIOK1	58	70.948	ENSPNYG00000004465	riok1	100	70.948	Pundamilia_nyererei
ENSPTRG00000017700	RIOK1	99	67.944	ENSPNAG00000015435	riok1	99	70.070	Pygocentrus_nattereri
ENSPTRG00000017700	RIOK1	99	81.673	ENSRNOG00000014049	Riok1	100	87.069	Rattus_norvegicus
ENSPTRG00000017700	RIOK1	100	96.303	ENSRBIG00000036685	RIOK1	100	96.303	Rhinopithecus_bieti
ENSPTRG00000017700	RIOK1	100	96.479	ENSRROG00000036611	RIOK1	100	96.479	Rhinopithecus_roxellana
ENSPTRG00000017700	RIOK1	59	41.576	YOR119C	RIO1	96	38.356	Saccharomyces_cerevisiae
ENSPTRG00000017700	RIOK1	100	97.183	ENSSBOG00000012588	RIOK1	100	97.183	Saimiri_boliviensis_boliviensis
ENSPTRG00000017700	RIOK1	85	80.206	ENSSHAG00000003091	RIOK1	93	77.597	Sarcophilus_harrisii
ENSPTRG00000017700	RIOK1	87	72.435	ENSSFOG00015001035	riok1	88	73.939	Scleropages_formosus
ENSPTRG00000017700	RIOK1	58	64.526	ENSSDUG00000007291	riok1	100	64.526	Seriola_dumerili
ENSPTRG00000017700	RIOK1	98	66.129	ENSSLDG00000017657	riok1	99	65.771	Seriola_lalandi_dorsalis
ENSPTRG00000017700	RIOK1	87	68.560	ENSSPUG00000007624	RIOK1	84	68.826	Sphenodon_punctatus
ENSPTRG00000017700	RIOK1	99	68.984	ENSSPAG00000022710	riok1	100	68.627	Stegastes_partitus
ENSPTRG00000017700	RIOK1	100	85.387	ENSSSCG00000001024	RIOK1	100	84.683	Sus_scrofa
ENSPTRG00000017700	RIOK1	100	76.614	ENSTGUG00000002331	RIOK1	100	77.003	Taeniopygia_guttata
ENSPTRG00000017700	RIOK1	52	63.758	ENSTRUG00000001575	-	100	63.758	Takifugu_rubripes
ENSPTRG00000017700	RIOK1	74	63.420	ENSTRUG00000002854	riok1	94	64.948	Takifugu_rubripes
ENSPTRG00000017700	RIOK1	99	60.595	ENSTNIG00000003078	riok1	88	65.524	Tetraodon_nigroviridis
ENSPTRG00000017700	RIOK1	100	85.387	ENSTBEG00000016730	RIOK1	100	84.859	Tupaia_belangeri
ENSPTRG00000017700	RIOK1	73	96.429	ENSTTRG00000017335	RIOK1	87	96.429	Tursiops_truncatus
ENSPTRG00000017700	RIOK1	94	89.118	ENSUAMG00000003721	RIOK1	96	88.555	Ursus_americanus
ENSPTRG00000017700	RIOK1	100	89.631	ENSUMAG00000018461	RIOK1	100	88.928	Ursus_maritimus
ENSPTRG00000017700	RIOK1	70	85.223	ENSVPAG00000010813	-	73	85.223	Vicugna_pacos
ENSPTRG00000017700	RIOK1	100	88.225	ENSVVUG00000005018	RIOK1	100	88.225	Vulpes_vulpes
ENSPTRG00000017700	RIOK1	88	73.747	ENSXETG00000020436	riok1	86	74.795	Xenopus_tropicalis
ENSPTRG00000017700	RIOK1	84	64.916	ENSXCOG00000000245	riok1	100	66.176	Xiphophorus_couchianus
ENSPTRG00000017700	RIOK1	70	73.935	ENSXMAG00000014572	riok1	82	71.529	Xiphophorus_maculatus