EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPTRG00000017703 (Gene tree)
Gene ID: 462421
Gene Symbol: SNRNP48
Alias: -
Full Name: small nuclear ribonucleoprotein U11/U12 subunit 48
Gene Type: protein_coding
Species: Pan_troglodytes
Status: putative
Strand: Plus strand
Length: 22026 bases
Position: chr6:7625456-7647481
Accession: 8564
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTRP00000085091	zf-U11-48K	PF05253.12	1.4e-09	1	1
ENSPTRP00000030224	zf-U11-48K	PF05253.12	1.4e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTRT00000032715	-	999	-	ENSPTRP00000030224	332 (aa)	-	H2QS98
ENSPTRT00000101251	-	4188	XM_001165716	ENSPTRP00000085091	339 (aa)	XP_001165716	K7B0S5

Gene Model

Click here to download ENSPTRG00000017703's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000017703's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTRG00000017703	SNRNP48	100	99.705	ENSG00000168566	SNRNP48	100	99.705	Homo_sapiens
ENSPTRG00000017703	SNRNP48	81	47.703	ENSAPOG00000021430	snrnp48	83	47.423	Acanthochromis_polyacanthus
ENSPTRG00000017703	SNRNP48	99	90.202	ENSAMEG00000017349	SNRNP48	100	89.049	Ailuropoda_melanoleuca
ENSPTRG00000017703	SNRNP48	83	46.290	ENSACIG00000002032	snrnp48	82	46.975	Amphilophus_citrinellus
ENSPTRG00000017703	SNRNP48	81	47.703	ENSAOCG00000010562	snrnp48	96	42.693	Amphiprion_ocellaris
ENSPTRG00000017703	SNRNP48	81	48.043	ENSAPEG00000003231	snrnp48	96	42.899	Amphiprion_percula
ENSPTRG00000017703	SNRNP48	77	50.368	ENSATEG00000020210	snrnp48	81	50.000	Anabas_testudineus
ENSPTRG00000017703	SNRNP48	83	65.068	ENSACAG00000002811	SNRNP48	89	64.828	Anolis_carolinensis
ENSPTRG00000017703	SNRNP48	100	98.525	ENSANAG00000033538	SNRNP48	100	98.525	Aotus_nancymaae
ENSPTRG00000017703	SNRNP48	94	45.370	ENSAMXG00000015309	snrnp48	85	47.735	Astyanax_mexicanus
ENSPTRG00000017703	SNRNP48	100	86.471	ENSBTAG00000001123	SNRNP48	100	86.765	Bos_taurus
ENSPTRG00000017703	SNRNP48	100	97.935	ENSCJAG00000021330	SNRNP48	100	97.935	Callithrix_jacchus
ENSPTRG00000017703	SNRNP48	99	91.964	ENSCAFG00000009574	SNRNP48	83	91.988	Canis_familiaris
ENSPTRG00000017703	SNRNP48	99	92.285	ENSCAFG00020013203	SNRNP48	99	92.285	Canis_lupus_dingo
ENSPTRG00000017703	SNRNP48	100	87.941	ENSCHIG00000015216	SNRNP48	100	88.235	Capra_hircus
ENSPTRG00000017703	SNRNP48	100	93.510	ENSTSYG00000000698	SNRNP48	100	93.510	Carlito_syrichta
ENSPTRG00000017703	SNRNP48	91	88.312	ENSCAPG00000006768	SNRNP48	100	87.987	Cavia_aperea
ENSPTRG00000017703	SNRNP48	100	91.150	ENSCPOG00000007910	SNRNP48	100	91.150	Cavia_porcellus
ENSPTRG00000017703	SNRNP48	100	97.050	ENSCCAG00000035652	SNRNP48	100	97.050	Cebus_capucinus
ENSPTRG00000017703	SNRNP48	100	98.525	ENSCATG00000033947	SNRNP48	100	98.525	Cercocebus_atys
ENSPTRG00000017703	SNRNP48	100	90.855	ENSCLAG00000003765	SNRNP48	100	90.855	Chinchilla_lanigera
ENSPTRG00000017703	SNRNP48	100	99.115	ENSCSAG00000007409	SNRNP48	100	99.115	Chlorocebus_sabaeus
ENSPTRG00000017703	SNRNP48	85	63.487	ENSCPBG00000019146	SNRNP48	90	64.310	Chrysemys_picta_bellii
ENSPTRG00000017703	SNRNP48	94	30.341	ENSCING00000004121	-	70	32.645	Ciona_intestinalis
ENSPTRG00000017703	SNRNP48	100	99.115	ENSCANG00000030017	SNRNP48	100	99.115	Colobus_angolensis_palliatus
ENSPTRG00000017703	SNRNP48	100	88.791	ENSCGRG00001001076	-	100	87.906	Cricetulus_griseus_chok1gshd
ENSPTRG00000017703	SNRNP48	99	70.149	ENSCGRG00001008805	-	95	69.552	Cricetulus_griseus_chok1gshd
ENSPTRG00000017703	SNRNP48	100	88.791	ENSCGRG00000007781	Snrnp48	100	87.906	Cricetulus_griseus_crigri
ENSPTRG00000017703	SNRNP48	77	49.430	ENSCSEG00000000722	snrnp48	72	49.808	Cynoglossus_semilaevis
ENSPTRG00000017703	SNRNP48	89	46.326	ENSCVAG00000019829	snrnp48	73	47.222	Cyprinodon_variegatus
ENSPTRG00000017703	SNRNP48	81	46.853	ENSDARG00000039989	snrnp48	83	45.548	Danio_rerio
ENSPTRG00000017703	SNRNP48	100	91.176	ENSDNOG00000014978	SNRNP48	100	91.176	Dasypus_novemcinctus
ENSPTRG00000017703	SNRNP48	99	89.086	ENSDORG00000015140	Snrnp48	100	88.235	Dipodomys_ordii
ENSPTRG00000017703	SNRNP48	99	92.899	ENSEASG00005012021	SNRNP48	100	92.625	Equus_asinus_asinus
ENSPTRG00000017703	SNRNP48	100	93.510	ENSECAG00000026937	SNRNP48	100	93.510	Equus_caballus
ENSPTRG00000017703	SNRNP48	100	70.882	ENSEEUG00000015437	SNRNP48	99	70.588	Erinaceus_europaeus
ENSPTRG00000017703	SNRNP48	87	47.020	ENSELUG00000009766	snrnp48	77	48.214	Esox_lucius
ENSPTRG00000017703	SNRNP48	100	93.805	ENSFCAG00000018853	SNRNP48	100	93.805	Felis_catus
ENSPTRG00000017703	SNRNP48	83	66.438	ENSFALG00000007797	SNRNP48	92	66.436	Ficedula_albicollis
ENSPTRG00000017703	SNRNP48	99	90.828	ENSFDAG00000009231	SNRNP48	100	90.560	Fukomys_damarensis
ENSPTRG00000017703	SNRNP48	59	56.931	ENSFHEG00000014647	snrnp48	97	46.465	Fundulus_heteroclitus
ENSPTRG00000017703	SNRNP48	73	47.581	ENSGMOG00000018599	-	86	45.583	Gadus_morhua
ENSPTRG00000017703	SNRNP48	78	67.148	ENSGALG00000013005	SNRNP48	82	68.571	Gallus_gallus
ENSPTRG00000017703	SNRNP48	82	48.592	ENSGAFG00000021639	snrnp48	81	44.109	Gambusia_affinis
ENSPTRG00000017703	SNRNP48	71	51.653	ENSGACG00000017756	-	84	48.432	Gasterosteus_aculeatus
ENSPTRG00000017703	SNRNP48	84	62.583	ENSGAGG00000000865	SNRNP48	96	63.300	Gopherus_agassizii
ENSPTRG00000017703	SNRNP48	100	99.705	ENSGGOG00000013220	SNRNP48	100	99.705	Gorilla_gorilla
ENSPTRG00000017703	SNRNP48	76	47.893	ENSHBUG00000017066	snrnp48	83	45.918	Haplochromis_burtoni
ENSPTRG00000017703	SNRNP48	99	92.012	ENSHGLG00000015241	SNRNP48	100	91.740	Heterocephalus_glaber_female
ENSPTRG00000017703	SNRNP48	99	92.012	ENSHGLG00100010027	SNRNP48	100	91.740	Heterocephalus_glaber_male
ENSPTRG00000017703	SNRNP48	72	47.561	ENSHCOG00000014066	snrnp48	81	45.486	Hippocampus_comes
ENSPTRG00000017703	SNRNP48	100	94.690	ENSSTOG00000014635	SNRNP48	100	97.000	Ictidomys_tridecemlineatus
ENSPTRG00000017703	SNRNP48	100	85.841	ENSJJAG00000011495	Snrnp48	100	85.841	Jaculus_jaculus
ENSPTRG00000017703	SNRNP48	90	44.625	ENSKMAG00000016514	snrnp48	80	46.975	Kryptolebias_marmoratus
ENSPTRG00000017703	SNRNP48	76	49.421	ENSLBEG00000026249	snrnp48	95	43.314	Labrus_bergylta
ENSPTRG00000017703	SNRNP48	96	53.892	ENSLACG00000003958	SNRNP48	98	52.478	Latimeria_chalumnae
ENSPTRG00000017703	SNRNP48	83	50.865	ENSLOCG00000004187	snrnp48	95	48.368	Lepisosteus_oculatus
ENSPTRG00000017703	SNRNP48	100	89.381	ENSLAFG00000011152	SNRNP48	100	89.381	Loxodonta_africana
ENSPTRG00000017703	SNRNP48	100	99.410	ENSMFAG00000045216	SNRNP48	100	99.410	Macaca_fascicularis
ENSPTRG00000017703	SNRNP48	100	99.410	ENSMMUG00000014785	SNRNP48	100	99.410	Macaca_mulatta
ENSPTRG00000017703	SNRNP48	100	99.115	ENSMNEG00000042269	SNRNP48	100	99.115	Macaca_nemestrina
ENSPTRG00000017703	SNRNP48	100	99.410	ENSMLEG00000034004	SNRNP48	100	99.410	Mandrillus_leucophaeus
ENSPTRG00000017703	SNRNP48	76	47.909	ENSMAMG00000018673	snrnp48	71	48.029	Mastacembelus_armatus
ENSPTRG00000017703	SNRNP48	83	65.986	ENSMGAG00000006037	SNRNP48	99	65.753	Meleagris_gallopavo
ENSPTRG00000017703	SNRNP48	100	89.381	ENSMAUG00000011944	Snrnp48	100	88.496	Mesocricetus_auratus
ENSPTRG00000017703	SNRNP48	100	92.625	ENSMICG00000012497	SNRNP48	100	92.625	Microcebus_murinus
ENSPTRG00000017703	SNRNP48	100	89.086	ENSMOCG00000015555	Snrnp48	100	88.201	Microtus_ochrogaster
ENSPTRG00000017703	SNRNP48	54	52.973	ENSMMOG00000003072	-	58	52.973	Mola_mola
ENSPTRG00000017703	SNRNP48	98	70.349	ENSMODG00000009996	SNRNP48	93	70.349	Monodelphis_domestica
ENSPTRG00000017703	SNRNP48	74	50.000	ENSMALG00000005725	snrnp48	79	48.188	Monopterus_albus
ENSPTRG00000017703	SNRNP48	100	87.906	MGP_CAROLIEiJ_G0018441	Snrnp48	100	87.021	Mus_caroli
ENSPTRG00000017703	SNRNP48	100	87.021	ENSMUSG00000021431	Snrnp48	100	86.136	Mus_musculus
ENSPTRG00000017703	SNRNP48	100	87.316	MGP_PahariEiJ_G0019509	Snrnp48	100	86.431	Mus_pahari
ENSPTRG00000017703	SNRNP48	100	86.431	MGP_SPRETEiJ_G0019321	Snrnp48	100	85.546	Mus_spretus
ENSPTRG00000017703	SNRNP48	99	87.870	ENSNGAG00000004849	Snrnp48	99	87.870	Nannospalax_galili
ENSPTRG00000017703	SNRNP48	76	47.510	ENSNBRG00000012127	snrnp48	84	45.578	Neolamprologus_brichardi
ENSPTRG00000017703	SNRNP48	100	100.000	ENSNLEG00000011667	SNRNP48	100	100.000	Nomascus_leucogenys
ENSPTRG00000017703	SNRNP48	95	78.328	ENSOPRG00000015471	SNRNP48	100	78.328	Ochotona_princeps
ENSPTRG00000017703	SNRNP48	74	48.047	ENSONIG00000001520	snrnp48	82	46.021	Oreochromis_niloticus
ENSPTRG00000017703	SNRNP48	57	62.500	ENSOANG00000019888	-	100	63.462	Ornithorhynchus_anatinus
ENSPTRG00000017703	SNRNP48	84	91.259	ENSOCUG00000005168	SNRNP48	100	90.789	Oryctolagus_cuniculus
ENSPTRG00000017703	SNRNP48	88	47.078	ENSORLG00000015654	snrnp48	82	47.586	Oryzias_latipes
ENSPTRG00000017703	SNRNP48	88	46.104	ENSORLG00020015976	snrnp48	70	46.897	Oryzias_latipes_hni
ENSPTRG00000017703	SNRNP48	88	47.078	ENSORLG00015022379	snrnp48	71	47.931	Oryzias_latipes_hsok
ENSPTRG00000017703	SNRNP48	83	47.569	ENSOMEG00000022007	snrnp48	82	48.264	Oryzias_melastigma
ENSPTRG00000017703	SNRNP48	92	92.926	ENSOGAG00000005275	SNRNP48	96	93.060	Otolemur_garnettii
ENSPTRG00000017703	SNRNP48	85	88.153	ENSOARG00000017319	SNRNP48	99	88.339	Ovis_aries
ENSPTRG00000017703	SNRNP48	100	100.000	ENSPPAG00000032873	SNRNP48	100	100.000	Pan_paniscus
ENSPTRG00000017703	SNRNP48	100	94.100	ENSPPRG00000004283	SNRNP48	100	94.100	Panthera_pardus
ENSPTRG00000017703	SNRNP48	85	94.774	ENSPTIG00000013502	SNRNP48	99	95.053	Panthera_tigris_altaica
ENSPTRG00000017703	SNRNP48	100	99.410	ENSPANG00000000771	SNRNP48	100	99.410	Papio_anubis
ENSPTRG00000017703	SNRNP48	94	46.087	ENSPKIG00000013703	snrnp48	70	44.940	Paramormyrops_kingsleyae
ENSPTRG00000017703	SNRNP48	87	61.613	ENSPSIG00000002213	SNRNP48	92	62.116	Pelodiscus_sinensis
ENSPTRG00000017703	SNRNP48	71	50.000	ENSPMGG00000008120	snrnp48	86	50.000	Periophthalmus_magnuspinnatus
ENSPTRG00000017703	SNRNP48	100	89.381	ENSPEMG00000008872	Snrnp48	100	89.691	Peromyscus_maniculatus_bairdii
ENSPTRG00000017703	SNRNP48	81	48.387	ENSPFOG00000003578	snrnp48	81	45.399	Poecilia_formosa
ENSPTRG00000017703	SNRNP48	67	52.402	ENSPLAG00000002290	snrnp48	77	51.965	Poecilia_latipinna
ENSPTRG00000017703	SNRNP48	81	48.387	ENSPMEG00000018033	snrnp48	81	44.785	Poecilia_mexicana
ENSPTRG00000017703	SNRNP48	72	52.439	ENSPREG00000018541	snrnp48	80	49.291	Poecilia_reticulata
ENSPTRG00000017703	SNRNP48	100	98.525	ENSPPYG00000016209	SNRNP48	100	98.525	Pongo_abelii
ENSPTRG00000017703	SNRNP48	79	71.536	ENSPCAG00000011991	SNRNP48	99	71.536	Procavia_capensis
ENSPTRG00000017703	SNRNP48	100	91.740	ENSPVAG00000002854	SNRNP48	100	91.740	Pteropus_vampyrus
ENSPTRG00000017703	SNRNP48	76	48.276	ENSPNYG00000015399	snrnp48	92	46.259	Pundamilia_nyererei
ENSPTRG00000017703	SNRNP48	100	88.201	ENSRNOG00000013756	Snrnp48	100	87.316	Rattus_norvegicus
ENSPTRG00000017703	SNRNP48	91	98.710	ENSRBIG00000043856	SNRNP48	98	98.710	Rhinopithecus_bieti
ENSPTRG00000017703	SNRNP48	100	99.115	ENSRROG00000043229	SNRNP48	100	99.115	Rhinopithecus_roxellana
ENSPTRG00000017703	SNRNP48	100	98.525	ENSSBOG00000019486	SNRNP48	100	98.525	Saimiri_boliviensis_boliviensis
ENSPTRG00000017703	SNRNP48	98	71.221	ENSSHAG00000014483	SNRNP48	99	71.221	Sarcophilus_harrisii
ENSPTRG00000017703	SNRNP48	73	51.779	ENSSFOG00015006610	snrnp48	69	49.662	Scleropages_formosus
ENSPTRG00000017703	SNRNP48	87	46.801	ENSSDUG00000014953	snrnp48	96	42.571	Seriola_dumerili
ENSPTRG00000017703	SNRNP48	83	48.136	ENSSLDG00000005989	snrnp48	97	42.373	Seriola_lalandi_dorsalis
ENSPTRG00000017703	SNRNP48	84	64.765	ENSSPUG00000006257	SNRNP48	84	65.188	Sphenodon_punctatus
ENSPTRG00000017703	SNRNP48	78	48.905	ENSSPAG00000006454	snrnp48	80	48.214	Stegastes_partitus
ENSPTRG00000017703	SNRNP48	83	64.605	ENSTGUG00000007575	SNRNP48	92	64.583	Taeniopygia_guttata
ENSPTRG00000017703	SNRNP48	92	42.722	ENSTRUG00000007031	snrnp48	93	43.963	Takifugu_rubripes
ENSPTRG00000017703	SNRNP48	76	45.769	ENSTNIG00000012977	-	72	47.131	Tetraodon_nigroviridis
ENSPTRG00000017703	SNRNP48	100	75.221	ENSTBEG00000015620	SNRNP48	100	75.221	Tupaia_belangeri
ENSPTRG00000017703	SNRNP48	100	90.560	ENSTTRG00000016715	SNRNP48	100	90.560	Tursiops_truncatus
ENSPTRG00000017703	SNRNP48	100	93.215	ENSUAMG00000003690	SNRNP48	100	92.035	Ursus_americanus
ENSPTRG00000017703	SNRNP48	85	87.805	ENSVPAG00000003557	SNRNP48	99	87.633	Vicugna_pacos
ENSPTRG00000017703	SNRNP48	99	91.988	ENSVVUG00000004996	SNRNP48	99	91.988	Vulpes_vulpes
ENSPTRG00000017703	SNRNP48	89	52.229	ENSXETG00000020447	snrnp48	99	48.870	Xenopus_tropicalis
ENSPTRG00000017703	SNRNP48	67	51.739	ENSXCOG00000004478	snrnp48	69	51.489	Xiphophorus_couchianus
ENSPTRG00000017703	SNRNP48	82	50.179	ENSXMAG00000013595	snrnp48	81	45.317	Xiphophorus_maculatus