EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPTRG00000017985 (Gene tree)
Gene ID: 462568
Gene Symbol: VARS
Alias: -
Full Name: valyl-tRNA synthetase
Gene Type: protein_coding
Species: Pan_troglodytes
Status: putative
Strand: Minus strand
Length: 18395 bases
Position: chr6:31936173-31954567
Accession: 12741
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTRP00000030618	tRNA-synt_1g	PF09334.11	2.8e-10	1	1
ENSPTRP00000030618	Anticodon_1	PF08264.13	3.2e-32	1	1
ENSPTRP00000030618	tRNA-synt_1	PF00133.22	5.7e-201	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTRT00000033138	-	4301	XM_009450928	ENSPTRP00000030618	1264 (aa)	XP_009449203	H2QSM5

Gene Model

Click here to download ENSPTRG00000017985's gene model file

Pathways

Pathway ID	Pathway Name	Source
ptr00970	Aminoacyl-tRNA biosynthesis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000017985's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPTRG00000017985	VARS	81	50.435	ENSPTRG00000034497	VARS2	91	51.762

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTRG00000017985	VARS	100	99.525	ENSG00000204394	VARS	100	99.525	Homo_sapiens
ENSPTRG00000017985	VARS	98	64.555	ENSAPOG00000020921	vars	99	64.314	Acanthochromis_polyacanthus
ENSPTRG00000017985	VARS	98	64.555	ENSAPOG00000020691	vars	99	64.314	Acanthochromis_polyacanthus
ENSPTRG00000017985	VARS	100	95.178	ENSAMEG00000006417	VARS	100	95.178	Ailuropoda_melanoleuca
ENSPTRG00000017985	VARS	100	65.490	ENSACIG00000013752	vars	100	65.252	Amphilophus_citrinellus
ENSPTRG00000017985	VARS	100	64.469	ENSAOCG00000002447	vars	100	64.123	Amphiprion_ocellaris
ENSPTRG00000017985	VARS	100	64.469	ENSAPEG00000010638	vars	99	64.486	Amphiprion_percula
ENSPTRG00000017985	VARS	100	64.381	ENSATEG00000020219	vars	100	64.145	Anabas_testudineus
ENSPTRG00000017985	VARS	90	70.512	ENSACAG00000029133	-	99	70.165	Anolis_carolinensis
ENSPTRG00000017985	VARS	100	97.785	ENSANAG00000015453	VARS	100	97.785	Aotus_nancymaae
ENSPTRG00000017985	VARS	100	64.806	ENSACLG00000025699	vars	97	64.569	Astatotilapia_calliptera
ENSPTRG00000017985	VARS	94	65.805	ENSAMXG00000017716	vars	95	65.805	Astyanax_mexicanus
ENSPTRG00000017985	VARS	100	95.174	ENSBTAG00000005631	VARS	100	95.174	Bos_taurus
ENSPTRG00000017985	VARS	100	97.864	ENSCJAG00000002604	VARS	100	97.864	Callithrix_jacchus
ENSPTRG00000017985	VARS	100	94.541	ENSCAFG00000000636	VARS	100	94.541	Canis_familiaris
ENSPTRG00000017985	VARS	94	94.510	ENSCAFG00020020790	VARS	96	94.510	Canis_lupus_dingo
ENSPTRG00000017985	VARS	100	95.411	ENSCHIG00000011008	VARS	100	95.411	Capra_hircus
ENSPTRG00000017985	VARS	100	96.203	ENSTSYG00000001567	VARS	100	96.203	Carlito_syrichta
ENSPTRG00000017985	VARS	91	90.657	ENSCAPG00000013736	VARS	99	90.657	Cavia_aperea
ENSPTRG00000017985	VARS	100	91.851	ENSCPOG00000000870	VARS	100	91.851	Cavia_porcellus
ENSPTRG00000017985	VARS	100	98.022	ENSCCAG00000035656	VARS	100	98.022	Cebus_capucinus
ENSPTRG00000017985	VARS	100	98.734	ENSCATG00000022394	VARS	100	98.734	Cercocebus_atys
ENSPTRG00000017985	VARS	88	89.764	ENSCLAG00000009470	VARS	92	89.764	Chinchilla_lanigera
ENSPTRG00000017985	VARS	100	99.209	ENSCSAG00000008784	VARS	100	99.209	Chlorocebus_sabaeus
ENSPTRG00000017985	VARS	77	74.333	ENSCPBG00000007943	VARS	96	74.435	Chrysemys_picta_bellii
ENSPTRG00000017985	VARS	100	98.892	ENSCANG00000033570	VARS	100	98.892	Colobus_angolensis_palliatus
ENSPTRG00000017985	VARS	100	93.434	ENSCGRG00001005686	Vars	100	93.434	Cricetulus_griseus_chok1gshd
ENSPTRG00000017985	VARS	92	88.275	ENSCGRG00000013352	Vars	78	88.275	Cricetulus_griseus_crigri
ENSPTRG00000017985	VARS	100	64.506	ENSCSEG00000019652	vars	100	64.348	Cynoglossus_semilaevis
ENSPTRG00000017985	VARS	100	64.957	ENSCVAG00000022398	vars	100	64.957	Cyprinodon_variegatus
ENSPTRG00000017985	VARS	100	64.806	ENSDARG00000044575	vars	100	64.802	Danio_rerio
ENSPTRG00000017985	VARS	84	93.227	ENSDORG00000016433	Vars	95	93.227	Dipodomys_ordii
ENSPTRG00000017985	VARS	69	86.438	ENSETEG00000003824	VARS	76	86.438	Echinops_telfairi
ENSPTRG00000017985	VARS	50	70.780	ENSEBUG00000007086	vars	72	69.808	Eptatretus_burgeri
ENSPTRG00000017985	VARS	57	61.951	ENSEBUG00000004637	vars	100	62.225	Eptatretus_burgeri
ENSPTRG00000017985	VARS	100	95.965	ENSEASG00005015673	VARS	100	95.965	Equus_asinus_asinus
ENSPTRG00000017985	VARS	100	94.941	ENSECAG00000014620	VARS	100	95.415	Equus_caballus
ENSPTRG00000017985	VARS	83	94.118	ENSEEUG00000004116	VARS	83	94.118	Erinaceus_europaeus
ENSPTRG00000017985	VARS	100	64.225	ENSELUG00000006550	vars	97	64.225	Esox_lucius
ENSPTRG00000017985	VARS	100	95.095	ENSFCAG00000004510	VARS	100	95.095	Felis_catus
ENSPTRG00000017985	VARS	82	91.753	ENSFDAG00000011401	VARS	100	91.753	Fukomys_damarensis
ENSPTRG00000017985	VARS	100	65.035	ENSFHEG00000010672	vars	100	65.035	Fundulus_heteroclitus
ENSPTRG00000017985	VARS	92	66.140	ENSGMOG00000014908	vars	97	66.140	Gadus_morhua
ENSPTRG00000017985	VARS	100	65.292	ENSGAFG00000021630	vars	100	65.292	Gambusia_affinis
ENSPTRG00000017985	VARS	92	66.249	ENSGACG00000009601	vars	98	65.917	Gasterosteus_aculeatus
ENSPTRG00000017985	VARS	50	65.300	ENSGAGG00000006508	-	91	64.826	Gopherus_agassizii
ENSPTRG00000017985	VARS	100	99.525	ENSGGOG00000011364	VARS	100	99.525	Gorilla_gorilla
ENSPTRG00000017985	VARS	100	64.729	ENSHBUG00000017151	vars	97	64.491	Haplochromis_burtoni
ENSPTRG00000017985	VARS	100	90.902	ENSHGLG00000011646	VARS	100	90.585	Heterocephalus_glaber_female
ENSPTRG00000017985	VARS	93	83.306	ENSHGLG00100018062	VARS	100	83.223	Heterocephalus_glaber_male
ENSPTRG00000017985	VARS	99	64.496	ENSHCOG00000012198	vars	99	64.514	Hippocampus_comes
ENSPTRG00000017985	VARS	100	65.214	ENSIPUG00000005218	vars	100	65.214	Ictalurus_punctatus
ENSPTRG00000017985	VARS	100	94.941	ENSSTOG00000013112	VARS	100	94.941	Ictidomys_tridecemlineatus
ENSPTRG00000017985	VARS	100	91.456	ENSJJAG00000019749	-	100	90.823	Jaculus_jaculus
ENSPTRG00000017985	VARS	100	72.073	ENSJJAG00000015343	-	100	72.073	Jaculus_jaculus
ENSPTRG00000017985	VARS	100	64.929	ENSKMAG00000009455	vars	100	64.692	Kryptolebias_marmoratus
ENSPTRG00000017985	VARS	100	64.585	ENSLBEG00000010341	vars	100	64.348	Labrus_bergylta
ENSPTRG00000017985	VARS	94	62.613	ENSLACG00000015232	VARS	99	62.951	Latimeria_chalumnae
ENSPTRG00000017985	VARS	100	66.719	ENSLOCG00000004240	vars	100	66.719	Lepisosteus_oculatus
ENSPTRG00000017985	VARS	100	94.066	ENSLAFG00000023090	VARS	100	93.671	Loxodonta_africana
ENSPTRG00000017985	VARS	100	99.130	ENSMFAG00000001032	VARS	100	99.130	Macaca_fascicularis
ENSPTRG00000017985	VARS	100	99.130	ENSMMUG00000006828	VARS	100	99.130	Macaca_mulatta
ENSPTRG00000017985	VARS	100	99.130	ENSMNEG00000042072	VARS	100	99.130	Macaca_nemestrina
ENSPTRG00000017985	VARS	100	98.892	ENSMLEG00000039307	VARS	100	98.892	Mandrillus_leucophaeus
ENSPTRG00000017985	VARS	100	64.336	ENSMAMG00000003949	vars	100	64.587	Mastacembelus_armatus
ENSPTRG00000017985	VARS	100	64.806	ENSMZEG00005018327	vars	100	64.246	Maylandia_zebra
ENSPTRG00000017985	VARS	100	93.038	ENSMAUG00000006715	Vars	100	93.038	Mesocricetus_auratus
ENSPTRG00000017985	VARS	100	95.411	ENSMICG00000003548	VARS	100	95.771	Microcebus_murinus
ENSPTRG00000017985	VARS	100	90.269	ENSMOCG00000015404	Vars	100	90.111	Microtus_ochrogaster
ENSPTRG00000017985	VARS	100	64.050	ENSMMOG00000015801	vars	100	64.050	Mola_mola
ENSPTRG00000017985	VARS	100	86.867	ENSMODG00000015204	-	100	86.867	Monodelphis_domestica
ENSPTRG00000017985	VARS	99	64.437	ENSMALG00000022532	vars	99	64.303	Monopterus_albus
ENSPTRG00000017985	VARS	100	93.354	MGP_CAROLIEiJ_G0021491	Vars	100	92.880	Mus_caroli
ENSPTRG00000017985	VARS	100	93.354	ENSMUSG00000007029	Vars	100	92.880	Mus_musculus
ENSPTRG00000017985	VARS	100	92.722	MGP_PahariEiJ_G0020486	Vars	100	92.326	Mus_pahari
ENSPTRG00000017985	VARS	100	93.434	MGP_SPRETEiJ_G0022396	Vars	100	92.959	Mus_spretus
ENSPTRG00000017985	VARS	100	95.174	ENSMPUG00000010821	VARS	100	95.174	Mustela_putorius_furo
ENSPTRG00000017985	VARS	78	92.915	ENSMLUG00000013126	VARS	100	93.522	Myotis_lucifugus
ENSPTRG00000017985	VARS	100	92.326	ENSNGAG00000012151	Vars	100	92.642	Nannospalax_galili
ENSPTRG00000017985	VARS	100	64.496	ENSNBRG00000020520	vars	100	64.258	Neolamprologus_brichardi
ENSPTRG00000017985	VARS	100	98.734	ENSNLEG00000006351	VARS	100	98.734	Nomascus_leucogenys
ENSPTRG00000017985	VARS	100	83.070	ENSMEUG00000011378	VARS	100	83.070	Notamacropus_eugenii
ENSPTRG00000017985	VARS	100	94.066	ENSOPRG00000003607	VARS	100	94.066	Ochotona_princeps
ENSPTRG00000017985	VARS	100	91.614	ENSODEG00000017681	VARS	100	91.060	Octodon_degus
ENSPTRG00000017985	VARS	100	65.285	ENSONIG00000013064	vars	99	67.913	Oreochromis_niloticus
ENSPTRG00000017985	VARS	77	79.216	ENSOANG00000005400	VARS	98	78.385	Ornithorhynchus_anatinus
ENSPTRG00000017985	VARS	100	92.114	ENSOCUG00000022463	VARS	100	92.271	Oryctolagus_cuniculus
ENSPTRG00000017985	VARS	100	64.450	ENSORLG00000013063	vars	100	64.467	Oryzias_latipes
ENSPTRG00000017985	VARS	100	64.996	ENSORLG00020003504	vars	100	64.996	Oryzias_latipes_hni
ENSPTRG00000017985	VARS	100	64.892	ENSORLG00015009001	vars	100	64.892	Oryzias_latipes_hsok
ENSPTRG00000017985	VARS	100	64.660	ENSOMEG00000015016	vars	100	64.660	Oryzias_melastigma
ENSPTRG00000017985	VARS	100	95.332	ENSOGAG00000007515	VARS	100	95.332	Otolemur_garnettii
ENSPTRG00000017985	VARS	100	99.921	ENSPPAG00000034012	VARS	100	99.921	Pan_paniscus
ENSPTRG00000017985	VARS	100	95.253	ENSPPRG00000014855	VARS	100	95.253	Panthera_pardus
ENSPTRG00000017985	VARS	85	95.260	ENSPTIG00000010462	VARS	95	95.238	Panthera_tigris_altaica
ENSPTRG00000017985	VARS	100	97.319	ENSPANG00000014565	VARS	100	97.319	Papio_anubis
ENSPTRG00000017985	VARS	100	63.861	ENSPKIG00000016304	vars	100	63.861	Paramormyrops_kingsleyae
ENSPTRG00000017985	VARS	100	65.800	ENSPMGG00000023909	vars	100	65.642	Periophthalmus_magnuspinnatus
ENSPTRG00000017985	VARS	100	93.987	ENSPEMG00000006639	Vars	100	93.987	Peromyscus_maniculatus_bairdii
ENSPTRG00000017985	VARS	100	86.313	ENSPCIG00000018553	VARS	100	86.313	Phascolarctos_cinereus
ENSPTRG00000017985	VARS	100	65.525	ENSPFOG00000015690	vars	100	65.525	Poecilia_formosa
ENSPTRG00000017985	VARS	100	66.090	ENSPLAG00000009590	vars	100	65.775	Poecilia_latipinna
ENSPTRG00000017985	VARS	100	65.525	ENSPMEG00000004708	vars	100	65.525	Poecilia_mexicana
ENSPTRG00000017985	VARS	100	63.887	ENSPREG00000013264	vars	100	63.558	Poecilia_reticulata
ENSPTRG00000017985	VARS	100	97.864	ENSPPYG00000016460	VARS	100	97.864	Pongo_abelii
ENSPTRG00000017985	VARS	86	92.819	ENSPCAG00000013565	VARS	86	92.819	Procavia_capensis
ENSPTRG00000017985	VARS	100	96.443	ENSPCOG00000010942	VARS	100	96.443	Propithecus_coquereli
ENSPTRG00000017985	VARS	100	91.614	ENSPVAG00000012403	VARS	100	91.614	Pteropus_vampyrus
ENSPTRG00000017985	VARS	100	64.729	ENSPNYG00000022511	vars	100	64.491	Pundamilia_nyererei
ENSPTRG00000017985	VARS	100	64.701	ENSPNAG00000020962	vars	100	64.546	Pygocentrus_nattereri
ENSPTRG00000017985	VARS	100	93.750	ENSRNOG00000000867	Vars	100	93.750	Rattus_norvegicus
ENSPTRG00000017985	VARS	100	99.130	ENSRBIG00000041669	VARS	100	99.130	Rhinopithecus_bieti
ENSPTRG00000017985	VARS	100	99.130	ENSRROG00000045490	VARS	100	99.130	Rhinopithecus_roxellana
ENSPTRG00000017985	VARS	100	97.547	ENSSBOG00000035402	VARS	100	97.547	Saimiri_boliviensis_boliviensis
ENSPTRG00000017985	VARS	100	81.618	ENSSHAG00000006937	VARS	100	81.854	Sarcophilus_harrisii
ENSPTRG00000017985	VARS	100	64.556	ENSSFOG00015014272	vars	100	64.402	Scleropages_formosus
ENSPTRG00000017985	VARS	100	63.545	ENSSMAG00000009596	vars	99	63.382	Scophthalmus_maximus
ENSPTRG00000017985	VARS	100	64.396	ENSSDUG00000014177	vars	100	64.158	Seriola_dumerili
ENSPTRG00000017985	VARS	100	64.319	ENSSLDG00000025316	vars	100	64.081	Seriola_lalandi_dorsalis
ENSPTRG00000017985	VARS	100	64.771	ENSSPAG00000017068	vars	100	64.720	Stegastes_partitus
ENSPTRG00000017985	VARS	100	93.597	ENSSSCG00000038950	VARS	100	94.071	Sus_scrofa
ENSPTRG00000017985	VARS	82	64.142	ENSTRUG00000012307	vars	98	64.183	Takifugu_rubripes
ENSPTRG00000017985	VARS	100	65.129	ENSTNIG00000008011	vars	100	64.969	Tetraodon_nigroviridis
ENSPTRG00000017985	VARS	54	96.255	ENSTBEG00000004728	-	60	96.255	Tupaia_belangeri
ENSPTRG00000017985	VARS	100	86.155	ENSTTRG00000014128	VARS	100	86.155	Tursiops_truncatus
ENSPTRG00000017985	VARS	100	91.588	ENSUAMG00000010424	VARS	100	91.588	Ursus_americanus
ENSPTRG00000017985	VARS	93	94.921	ENSUMAG00000013486	VARS	98	94.444	Ursus_maritimus
ENSPTRG00000017985	VARS	100	94.150	ENSVVUG00000021323	VARS	100	93.913	Vulpes_vulpes
ENSPTRG00000017985	VARS	96	62.894	ENSXETG00000024076	vars	98	62.055	Xenopus_tropicalis
ENSPTRG00000017985	VARS	100	65.512	ENSXCOG00000019172	vars	100	65.512	Xiphophorus_couchianus
ENSPTRG00000017985	VARS	100	65.292	ENSXMAG00000010927	vars	100	65.292	Xiphophorus_maculatus