EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPTRG00000017997 (Gene tree)
Gene ID: 462573
Gene Symbol: SKIV2L
Alias: -
Full Name: Ski2 like RNA helicase
Gene Type: protein_coding
Species: Pan_troglodytes
Status: putative
Strand: Plus strand
Length: 10529 bases
Position: chr6:32141777-32152305
Accession: 52098
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTRP00000084883	rRNA_proc-arch	PF13234.6	8e-42	1	1
ENSPTRP00000046852	rRNA_proc-arch	PF13234.6	9.3e-42	1	1
ENSPTRP00000084883	DEAD	PF00270.29	3.3e-16	1	1
ENSPTRP00000046852	DEAD	PF00270.29	3.8e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTRT00000033247	-	3741	XM_001160927	ENSPTRP00000046852	1246 (aa)	XP_001160927	K7CW25
ENSPTRT00000110928	-	3438	-	ENSPTRP00000084883	1145 (aa)	-	A0A2I3T7M5
ENSPTRT00000082075	-	210	-	ENSPTRP00000083038	69 (aa)	-	A0A2J8NY55

Gene Model

Click here to download ENSPTRG00000017997's gene model file

Pathways

Pathway ID	Pathway Name	Source
ptr03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000017997's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPTRG00000017997	SKIV2L	86	36.561	ENSPTRG00000016878	MTREX	91	36.561

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTRG00000017997	SKIV2L	100	99.599	ENSG00000204351	SKIV2L	100	99.599	Homo_sapiens
ENSPTRG00000017997	SKIV2L	99	61.508	ENSAPOG00000008257	skiv2l	99	61.847	Acanthochromis_polyacanthus
ENSPTRG00000017997	SKIV2L	100	94.703	ENSAMEG00000002078	SKIV2L	100	94.703	Ailuropoda_melanoleuca
ENSPTRG00000017997	SKIV2L	99	60.048	ENSACIG00000016719	skiv2l	99	60.516	Amphilophus_citrinellus
ENSPTRG00000017997	SKIV2L	99	61.301	ENSAOCG00000017352	skiv2l	99	61.656	Amphiprion_ocellaris
ENSPTRG00000017997	SKIV2L	99	61.142	ENSAPEG00000001055	skiv2l	99	61.495	Amphiprion_percula
ENSPTRG00000017997	SKIV2L	99	61.146	ENSATEG00000007601	skiv2l	99	61.236	Anabas_testudineus
ENSPTRG00000017997	SKIV2L	99	65.176	ENSACAG00000011746	SKIV2L	99	66.135	Anolis_carolinensis
ENSPTRG00000017997	SKIV2L	100	97.673	ENSANAG00000037992	SKIV2L	100	97.673	Aotus_nancymaae
ENSPTRG00000017997	SKIV2L	99	61.569	ENSACLG00000006886	skiv2l	99	61.706	Astatotilapia_calliptera
ENSPTRG00000017997	SKIV2L	98	59.348	ENSAMXG00000011517	skiv2l	99	59.427	Astyanax_mexicanus
ENSPTRG00000017997	SKIV2L	100	94.783	ENSBTAG00000005587	SKIV2L	100	94.783	Bos_taurus
ENSPTRG00000017997	SKIV2L	96	39.737	WBGene00008502	skih-2	99	39.814	Caenorhabditis_elegans
ENSPTRG00000017997	SKIV2L	100	97.512	ENSCJAG00000002263	SKIV2L	100	97.512	Callithrix_jacchus
ENSPTRG00000017997	SKIV2L	100	94.543	ENSCAFG00000000679	SKIV2L	100	94.543	Canis_familiaris
ENSPTRG00000017997	SKIV2L	100	94.462	ENSCAFG00020000948	SKIV2L	100	94.462	Canis_lupus_dingo
ENSPTRG00000017997	SKIV2L	100	94.783	ENSCHIG00000012897	SKIV2L	100	94.783	Capra_hircus
ENSPTRG00000017997	SKIV2L	100	94.623	ENSTSYG00000012133	SKIV2L	100	94.623	Carlito_syrichta
ENSPTRG00000017997	SKIV2L	100	92.456	ENSCPOG00000001307	SKIV2L	100	92.616	Cavia_porcellus
ENSPTRG00000017997	SKIV2L	100	97.555	ENSCCAG00000026206	SKIV2L	100	97.555	Cebus_capucinus
ENSPTRG00000017997	SKIV2L	100	98.475	ENSCATG00000036901	SKIV2L	100	98.475	Cercocebus_atys
ENSPTRG00000017997	SKIV2L	100	93.178	ENSCLAG00000007678	SKIV2L	100	93.178	Chinchilla_lanigera
ENSPTRG00000017997	SKIV2L	100	98.154	ENSCSAG00000008988	SKIV2L	100	98.154	Chlorocebus_sabaeus
ENSPTRG00000017997	SKIV2L	87	64.912	ENSCPBG00000000343	SKIV2L	96	64.912	Chrysemys_picta_bellii
ENSPTRG00000017997	SKIV2L	94	52.675	ENSCING00000005576	-	99	51.017	Ciona_intestinalis
ENSPTRG00000017997	SKIV2L	100	98.515	ENSCANG00000039709	SKIV2L	100	98.635	Colobus_angolensis_palliatus
ENSPTRG00000017997	SKIV2L	100	93.585	ENSCGRG00001008385	Skiv2l	100	93.585	Cricetulus_griseus_chok1gshd
ENSPTRG00000017997	SKIV2L	99	61.514	ENSCSEG00000011326	skiv2l	98	61.433	Cynoglossus_semilaevis
ENSPTRG00000017997	SKIV2L	99	61.133	ENSCVAG00000003072	skiv2l	99	61.156	Cyprinodon_variegatus
ENSPTRG00000017997	SKIV2L	99	60.458	ENSDARG00000062206	skiv2l	99	60.640	Danio_rerio
ENSPTRG00000017997	SKIV2L	94	94.487	ENSDNOG00000037590	SKIV2L	100	88.409	Dasypus_novemcinctus
ENSPTRG00000017997	SKIV2L	93	44.932	FBgn0039117	tst	97	44.091	Drosophila_melanogaster
ENSPTRG00000017997	SKIV2L	75	92.802	ENSETEG00000009522	SKIV2L	69	92.802	Echinops_telfairi
ENSPTRG00000017997	SKIV2L	89	56.722	ENSEBUG00000013680	-	95	57.550	Eptatretus_burgeri
ENSPTRG00000017997	SKIV2L	93	95.263	ENSEASG00005015534	SKIV2L	99	95.263	Equus_asinus_asinus
ENSPTRG00000017997	SKIV2L	96	94.454	ENSECAG00000021823	SKIV2L	96	95.085	Equus_caballus
ENSPTRG00000017997	SKIV2L	57	98.024	ENSEEUG00000005049	SKIV2L	57	98.024	Erinaceus_europaeus
ENSPTRG00000017997	SKIV2L	99	60.316	ENSELUG00000000181	skiv2l	94	66.805	Esox_lucius
ENSPTRG00000017997	SKIV2L	100	95.185	ENSFCAG00000004519	SKIV2L	100	95.185	Felis_catus
ENSPTRG00000017997	SKIV2L	100	89.896	ENSFDAG00000009438	SKIV2L	100	90.136	Fukomys_damarensis
ENSPTRG00000017997	SKIV2L	100	60.032	ENSFHEG00000008853	skiv2l	99	61.187	Fundulus_heteroclitus
ENSPTRG00000017997	SKIV2L	99	59.472	ENSGMOG00000005926	skiv2l	98	59.497	Gadus_morhua
ENSPTRG00000017997	SKIV2L	85	60.449	ENSGALG00000035499	SKIV2L	99	60.550	Gallus_gallus
ENSPTRG00000017997	SKIV2L	99	61.234	ENSGAFG00000002382	skiv2l	99	61.427	Gambusia_affinis
ENSPTRG00000017997	SKIV2L	99	60.382	ENSGACG00000002927	skiv2l	98	60.582	Gasterosteus_aculeatus
ENSPTRG00000017997	SKIV2L	52	74.664	ENSGAGG00000015556	SKIV2L	81	73.856	Gopherus_agassizii
ENSPTRG00000017997	SKIV2L	100	99.599	ENSGGOG00000002270	SKIV2L	100	99.599	Gorilla_gorilla
ENSPTRG00000017997	SKIV2L	99	61.569	ENSHBUG00000000726	skiv2l	99	61.706	Haplochromis_burtoni
ENSPTRG00000017997	SKIV2L	100	91.506	ENSHGLG00000016596	SKIV2L	100	91.747	Heterocephalus_glaber_female
ENSPTRG00000017997	SKIV2L	100	88.862	ENSHGLG00100014161	SKIV2L	100	89.103	Heterocephalus_glaber_male
ENSPTRG00000017997	SKIV2L	98	59.642	ENSHCOG00000007191	skiv2l	100	59.642	Hippocampus_comes
ENSPTRG00000017997	SKIV2L	99	59.874	ENSIPUG00000016263	skiv2l	100	60.064	Ictalurus_punctatus
ENSPTRG00000017997	SKIV2L	100	94.462	ENSSTOG00000014596	SKIV2L	100	94.462	Ictidomys_tridecemlineatus
ENSPTRG00000017997	SKIV2L	71	60.432	ENSLACG00000002986	-	73	60.202	Latimeria_chalumnae
ENSPTRG00000017997	SKIV2L	100	94.141	ENSLAFG00000014231	SKIV2L	100	94.141	Loxodonta_africana
ENSPTRG00000017997	SKIV2L	100	98.395	ENSMFAG00000034235	SKIV2L	100	98.395	Macaca_fascicularis
ENSPTRG00000017997	SKIV2L	100	98.315	ENSMMUG00000000736	SKIV2L	100	98.315	Macaca_mulatta
ENSPTRG00000017997	SKIV2L	100	98.315	ENSMNEG00000044474	SKIV2L	100	98.315	Macaca_nemestrina
ENSPTRG00000017997	SKIV2L	100	98.555	ENSMLEG00000030512	SKIV2L	100	98.555	Mandrillus_leucophaeus
ENSPTRG00000017997	SKIV2L	99	60.952	ENSMAMG00000002927	skiv2l	99	61.142	Mastacembelus_armatus
ENSPTRG00000017997	SKIV2L	99	61.569	ENSMZEG00005026415	skiv2l	99	61.706	Maylandia_zebra
ENSPTRG00000017997	SKIV2L	68	57.480	ENSMGAG00000001320	SKIV2L	97	51.559	Meleagris_gallopavo
ENSPTRG00000017997	SKIV2L	100	93.023	ENSMAUG00000018613	Skiv2l	100	93.103	Mesocricetus_auratus
ENSPTRG00000017997	SKIV2L	100	95.345	ENSMICG00000046331	SKIV2L	100	95.345	Microcebus_murinus
ENSPTRG00000017997	SKIV2L	100	91.660	ENSMOCG00000014240	Skiv2l	100	91.740	Microtus_ochrogaster
ENSPTRG00000017997	SKIV2L	99	61.174	ENSMMOG00000014547	skiv2l	98	61.251	Mola_mola
ENSPTRG00000017997	SKIV2L	100	87.990	ENSMODG00000015052	SKIV2L	100	87.990	Monodelphis_domestica
ENSPTRG00000017997	SKIV2L	99	59.984	ENSMALG00000010535	skiv2l	98	59.967	Monopterus_albus
ENSPTRG00000017997	SKIV2L	100	93.103	MGP_CAROLIEiJ_G0021477	Skiv2l	100	93.103	Mus_caroli
ENSPTRG00000017997	SKIV2L	100	93.184	ENSMUSG00000040356	Skiv2l	100	93.184	Mus_musculus
ENSPTRG00000017997	SKIV2L	100	92.542	MGP_PahariEiJ_G0020472	Skiv2l	100	92.542	Mus_pahari
ENSPTRG00000017997	SKIV2L	100	92.943	MGP_SPRETEiJ_G0022382	Skiv2l	100	92.943	Mus_spretus
ENSPTRG00000017997	SKIV2L	100	94.462	ENSMPUG00000010567	SKIV2L	100	94.462	Mustela_putorius_furo
ENSPTRG00000017997	SKIV2L	100	93.660	ENSMLUG00000000628	SKIV2L	100	93.660	Myotis_lucifugus
ENSPTRG00000017997	SKIV2L	99	60.925	ENSNBRG00000018650	skiv2l	98	61.290	Neolamprologus_brichardi
ENSPTRG00000017997	SKIV2L	100	95.304	ENSNLEG00000006451	SKIV2L	100	95.575	Nomascus_leucogenys
ENSPTRG00000017997	SKIV2L	78	92.920	ENSMEUG00000006072	SKIV2L	78	92.920	Notamacropus_eugenii
ENSPTRG00000017997	SKIV2L	100	94.141	ENSOPRG00000003972	SKIV2L	100	94.141	Ochotona_princeps
ENSPTRG00000017997	SKIV2L	100	92.215	ENSODEG00000017516	SKIV2L	100	92.215	Octodon_degus
ENSPTRG00000017997	SKIV2L	99	61.992	ENSONIG00000013500	skiv2l	99	62.267	Oreochromis_niloticus
ENSPTRG00000017997	SKIV2L	100	94.944	ENSOCUG00000007019	SKIV2L	100	94.944	Oryctolagus_cuniculus
ENSPTRG00000017997	SKIV2L	99	61.331	ENSORLG00000002021	skiv2l	99	61.526	Oryzias_latipes
ENSPTRG00000017997	SKIV2L	99	61.173	ENSORLG00020009462	skiv2l	99	61.446	Oryzias_latipes_hni
ENSPTRG00000017997	SKIV2L	99	60.856	ENSORLG00015016750	skiv2l	99	61.044	Oryzias_latipes_hsok
ENSPTRG00000017997	SKIV2L	99	61.795	ENSOMEG00000008531	skiv2l	99	61.755	Oryzias_melastigma
ENSPTRG00000017997	SKIV2L	100	94.703	ENSOGAG00000009578	SKIV2L	100	94.703	Otolemur_garnettii
ENSPTRG00000017997	SKIV2L	100	89.193	ENSOARG00000002411	-	100	89.193	Ovis_aries
ENSPTRG00000017997	SKIV2L	100	98.958	ENSPPAG00000040211	SKIV2L	100	99.036	Pan_paniscus
ENSPTRG00000017997	SKIV2L	100	95.265	ENSPPRG00000005017	SKIV2L	100	95.265	Panthera_pardus
ENSPTRG00000017997	SKIV2L	100	94.864	ENSPTIG00000021656	SKIV2L	100	94.864	Panthera_tigris_altaica
ENSPTRG00000017997	SKIV2L	99	97.267	ENSPANG00000011501	SKIV2L	100	97.267	Papio_anubis
ENSPTRG00000017997	SKIV2L	99	60.300	ENSPKIG00000011876	skiv2l	99	60.447	Paramormyrops_kingsleyae
ENSPTRG00000017997	SKIV2L	99	60.660	ENSPMGG00000019707	skiv2l	98	60.813	Periophthalmus_magnuspinnatus
ENSPTRG00000017997	SKIV2L	100	93.585	ENSPEMG00000019001	Skiv2l	100	93.585	Peromyscus_maniculatus_bairdii
ENSPTRG00000017997	SKIV2L	100	87.600	ENSPCIG00000018792	SKIV2L	100	87.600	Phascolarctos_cinereus
ENSPTRG00000017997	SKIV2L	99	61.155	ENSPFOG00000002424	skiv2l	99	61.347	Poecilia_formosa
ENSPTRG00000017997	SKIV2L	99	61.283	ENSPLAG00000018304	skiv2l	99	61.477	Poecilia_latipinna
ENSPTRG00000017997	SKIV2L	99	61.234	ENSPMEG00000006997	skiv2l	99	61.427	Poecilia_mexicana
ENSPTRG00000017997	SKIV2L	99	59.325	ENSPREG00000002277	skiv2l	98	59.464	Poecilia_reticulata
ENSPTRG00000017997	SKIV2L	100	98.796	ENSPPYG00000016472	SKIV2L	100	98.796	Pongo_abelii
ENSPTRG00000017997	SKIV2L	77	94.473	ENSPCAG00000004178	SKIV2L	77	94.473	Procavia_capensis
ENSPTRG00000017997	SKIV2L	100	96.228	ENSPCOG00000010308	SKIV2L	100	96.228	Propithecus_coquereli
ENSPTRG00000017997	SKIV2L	100	93.579	ENSPVAG00000005136	SKIV2L	100	93.579	Pteropus_vampyrus
ENSPTRG00000017997	SKIV2L	99	59.839	ENSPNYG00000017853	skiv2l	97	66.632	Pundamilia_nyererei
ENSPTRG00000017997	SKIV2L	98	60.706	ENSPNAG00000011823	skiv2l	99	60.884	Pygocentrus_nattereri
ENSPTRG00000017997	SKIV2L	100	93.504	ENSRNOG00000000421	Skiv2l	100	93.504	Rattus_norvegicus
ENSPTRG00000017997	SKIV2L	100	94.536	ENSRBIG00000035485	SKIV2L	99	95.709	Rhinopithecus_bieti
ENSPTRG00000017997	SKIV2L	100	98.475	ENSRROG00000036429	SKIV2L	100	98.475	Rhinopithecus_roxellana
ENSPTRG00000017997	SKIV2L	93	37.530	YLR398C	-	93	37.609	Saccharomyces_cerevisiae
ENSPTRG00000017997	SKIV2L	100	97.512	ENSSBOG00000027920	SKIV2L	100	97.512	Saimiri_boliviensis_boliviensis
ENSPTRG00000017997	SKIV2L	100	87.350	ENSSHAG00000008963	SKIV2L	100	86.309	Sarcophilus_harrisii
ENSPTRG00000017997	SKIV2L	99	61.308	ENSSFOG00015016930	skiv2l	99	61.661	Scleropages_formosus
ENSPTRG00000017997	SKIV2L	99	60.974	ENSSMAG00000020185	skiv2l	99	60.995	Scophthalmus_maximus
ENSPTRG00000017997	SKIV2L	99	61.441	ENSSDUG00000019977	skiv2l	99	61.637	Seriola_dumerili
ENSPTRG00000017997	SKIV2L	99	60.177	ENSSLDG00000024382	skiv2l	98	60.244	Seriola_lalandi_dorsalis
ENSPTRG00000017997	SKIV2L	99	62.248	ENSSPUG00000012945	SKIV2L	98	62.421	Sphenodon_punctatus
ENSPTRG00000017997	SKIV2L	94	60.870	ENSSPAG00000012904	skiv2l	98	61.069	Stegastes_partitus
ENSPTRG00000017997	SKIV2L	100	94.783	ENSSSCG00000001424	SKIV2L	100	94.783	Sus_scrofa
ENSPTRG00000017997	SKIV2L	93	55.432	ENSTRUG00000000966	skiv2l	100	55.874	Takifugu_rubripes
ENSPTRG00000017997	SKIV2L	99	60.080	ENSTNIG00000004382	skiv2l	98	60.081	Tetraodon_nigroviridis
ENSPTRG00000017997	SKIV2L	94	93.252	ENSTBEG00000003462	SKIV2L	94	93.252	Tupaia_belangeri
ENSPTRG00000017997	SKIV2L	100	89.647	ENSTTRG00000005931	SKIV2L	100	89.647	Tursiops_truncatus
ENSPTRG00000017997	SKIV2L	100	95.185	ENSUAMG00000024336	SKIV2L	100	95.185	Ursus_americanus
ENSPTRG00000017997	SKIV2L	93	95.349	ENSUMAG00000012666	SKIV2L	99	95.349	Ursus_maritimus
ENSPTRG00000017997	SKIV2L	98	94.866	ENSVVUG00000022807	SKIV2L	98	94.866	Vulpes_vulpes
ENSPTRG00000017997	SKIV2L	100	58.333	ENSXETG00000010932	skiv2l	100	58.604	Xenopus_tropicalis
ENSPTRG00000017997	SKIV2L	99	61.619	ENSXCOG00000019517	skiv2l	96	61.700	Xiphophorus_couchianus
ENSPTRG00000017997	SKIV2L	99	61.045	ENSXMAG00000014079	skiv2l	99	61.236	Xiphophorus_maculatus