EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPTRG00000018727 (Gene tree)
Gene ID: 472167
Gene Symbol: SCAF8
Alias: -
Full Name: SR-related CTD associated factor 8
Gene Type: protein_coding
Species: Pan_troglodytes
Status: putative
Strand: Plus strand
Length: 100577 bases
Position: chr6:158915812-159016388
Accession: 9523
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTRP00000081571	RRM_1	PF00076.22	2.9e-09	1	1
ENSPTRP00000078473	RRM_1	PF00076.22	2.9e-09	1	1
ENSPTRP00000031961	RRM_1	PF00076.22	3e-09	1	1
ENSPTRP00000087690	RRM_1	PF00076.22	3.2e-09	1	1
ENSPTRP00000091998	RRM_1	PF00076.22	3.2e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTRT00000034577	-	4703	XM_003311555	ENSPTRP00000031961	1337 (aa)	XP_003311603	H2QTY0
ENSPTRT00000080739	-	3813	-	ENSPTRP00000078473	1270 (aa)	-	A0A2I3SNH1
ENSPTRT00000108835	-	5004	XM_009452267	ENSPTRP00000081571	1271 (aa)	XP_009450542	K7DIR5
ENSPTRT00000104958	-	4741	XM_016956512	ENSPTRP00000087690	1349 (aa)	XP_016812001	A0A2I3TER0
ENSPTRT00000086887	-	4059	-	ENSPTRP00000091998	1352 (aa)	-	A0A2I3TRZ8

Gene Model

Click here to download ENSPTRG00000018727's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000018727's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTRG00000018727	SCAF8	100	99.852	ENSG00000213079	SCAF8	100	99.852	Homo_sapiens
ENSPTRG00000018727	SCAF8	87	68.945	ENSAPOG00000015527	SCAF8	77	68.585	Acanthochromis_polyacanthus
ENSPTRG00000018727	SCAF8	100	94.892	ENSAMEG00000007583	SCAF8	99	95.458	Ailuropoda_melanoleuca
ENSPTRG00000018727	SCAF8	87	68.945	ENSAOCG00000002421	SCAF8	76	68.585	Amphiprion_ocellaris
ENSPTRG00000018727	SCAF8	88	65.745	ENSATEG00000006959	SCAF8	97	65.102	Anabas_testudineus
ENSPTRG00000018727	SCAF8	100	79.423	ENSAPLG00000005765	SCAF8	100	79.423	Anas_platyrhynchos
ENSPTRG00000018727	SCAF8	99	74.450	ENSACAG00000005282	SCAF8	99	74.430	Anolis_carolinensis
ENSPTRG00000018727	SCAF8	100	98.662	ENSANAG00000036184	SCAF8	100	98.662	Aotus_nancymaae
ENSPTRG00000018727	SCAF8	86	69.306	ENSACLG00000018828	SCAF8	80	68.902	Astatotilapia_calliptera
ENSPTRG00000018727	SCAF8	100	95.122	ENSBTAG00000031917	SCAF8	100	95.122	Bos_taurus
ENSPTRG00000018727	SCAF8	100	98.205	ENSCJAG00000012631	SCAF8	100	98.205	Callithrix_jacchus
ENSPTRG00000018727	SCAF8	99	96.282	ENSCAFG00000000570	SCAF8	100	96.372	Canis_familiaris
ENSPTRG00000018727	SCAF8	99	96.279	ENSCAFG00020015048	SCAF8	99	96.212	Canis_lupus_dingo
ENSPTRG00000018727	SCAF8	100	95.201	ENSCHIG00000025041	SCAF8	100	95.201	Capra_hircus
ENSPTRG00000018727	SCAF8	99	97.070	ENSTSYG00000010991	SCAF8	99	95.942	Carlito_syrichta
ENSPTRG00000018727	SCAF8	79	70.370	ENSCAPG00000003300	SCAF8	85	98.684	Cavia_aperea
ENSPTRG00000018727	SCAF8	99	88.152	ENSCPOG00000022216	-	99	87.362	Cavia_porcellus
ENSPTRG00000018727	SCAF8	100	98.190	ENSCCAG00000024952	SCAF8	100	98.220	Cebus_capucinus
ENSPTRG00000018727	SCAF8	100	99.213	ENSCATG00000035361	SCAF8	100	99.213	Cercocebus_atys
ENSPTRG00000018727	SCAF8	100	95.047	ENSCLAG00000004910	SCAF8	100	95.563	Chinchilla_lanigera
ENSPTRG00000018727	SCAF8	100	97.755	ENSCSAG00000013430	SCAF8	100	99.381	Chlorocebus_sabaeus
ENSPTRG00000018727	SCAF8	100	75.310	ENSCPBG00000016330	SCAF8	100	82.057	Chrysemys_picta_bellii
ENSPTRG00000018727	SCAF8	100	99.135	ENSCANG00000039499	SCAF8	100	99.160	Colobus_angolensis_palliatus
ENSPTRG00000018727	SCAF8	100	91.981	ENSCGRG00001020167	Scaf8	100	91.981	Cricetulus_griseus_chok1gshd
ENSPTRG00000018727	SCAF8	99	91.845	ENSCGRG00000004120	Scaf8	99	91.918	Cricetulus_griseus_crigri
ENSPTRG00000018727	SCAF8	87	66.265	ENSCSEG00000000043	-	78	67.470	Cynoglossus_semilaevis
ENSPTRG00000018727	SCAF8	82	67.366	ENSCVAG00000000925	SCAF8	77	66.841	Cyprinodon_variegatus
ENSPTRG00000018727	SCAF8	96	89.910	ENSDNOG00000025271	SCAF8	100	93.519	Dasypus_novemcinctus
ENSPTRG00000018727	SCAF8	99	93.454	ENSDORG00000006391	Scaf8	100	93.454	Dipodomys_ordii
ENSPTRG00000018727	SCAF8	100	96.462	ENSEASG00005018879	SCAF8	100	96.594	Equus_asinus_asinus
ENSPTRG00000018727	SCAF8	100	96.617	ENSECAG00000005540	SCAF8	100	96.672	Equus_caballus
ENSPTRG00000018727	SCAF8	88	65.116	ENSELUG00000002779	SCAF8	75	65.105	Esox_lucius
ENSPTRG00000018727	SCAF8	100	97.089	ENSFCAG00000023424	SCAF8	100	97.089	Felis_catus
ENSPTRG00000018727	SCAF8	100	78.816	ENSFALG00000012433	SCAF8	100	79.066	Ficedula_albicollis
ENSPTRG00000018727	SCAF8	99	95.800	ENSFDAG00000010335	SCAF8	99	95.800	Fukomys_damarensis
ENSPTRG00000018727	SCAF8	92	68.804	ENSFHEG00000008284	SCAF8	77	68.557	Fundulus_heteroclitus
ENSPTRG00000018727	SCAF8	60	68.594	ENSGMOG00000018812	SCAF8	77	61.164	Gadus_morhua
ENSPTRG00000018727	SCAF8	100	79.050	ENSGALG00000013635	SCAF8	99	79.439	Gallus_gallus
ENSPTRG00000018727	SCAF8	85	68.550	ENSGAFG00000018033	SCAF8	78	65.356	Gambusia_affinis
ENSPTRG00000018727	SCAF8	93	54.078	ENSGACG00000006909	SCAF8	100	55.057	Gasterosteus_aculeatus
ENSPTRG00000018727	SCAF8	63	72.660	ENSGAGG00000017820	-	88	72.660	Gopherus_agassizii
ENSPTRG00000018727	SCAF8	100	99.703	ENSGGOG00000008645	SCAF8	100	99.703	Gorilla_gorilla
ENSPTRG00000018727	SCAF8	86	69.184	ENSHBUG00000019537	SCAF8	80	68.780	Haplochromis_burtoni
ENSPTRG00000018727	SCAF8	100	95.597	ENSHGLG00000003619	SCAF8	100	95.597	Heterocephalus_glaber_female
ENSPTRG00000018727	SCAF8	100	94.969	ENSHGLG00100004708	SCAF8	100	95.563	Heterocephalus_glaber_male
ENSPTRG00000018727	SCAF8	99	96.598	ENSSTOG00000026043	SCAF8	100	96.688	Ictidomys_tridecemlineatus
ENSPTRG00000018727	SCAF8	100	92.925	ENSJJAG00000020480	Scaf8	100	92.925	Jaculus_jaculus
ENSPTRG00000018727	SCAF8	87	68.351	ENSKMAG00000012767	SCAF8	78	67.990	Kryptolebias_marmoratus
ENSPTRG00000018727	SCAF8	62	76.296	ENSLBEG00000012484	-	59	76.429	Labrus_bergylta
ENSPTRG00000018727	SCAF8	88	75.639	ENSLACG00000001394	SCAF8	99	63.162	Latimeria_chalumnae
ENSPTRG00000018727	SCAF8	100	61.611	ENSLOCG00000016856	SCAF8	100	60.751	Lepisosteus_oculatus
ENSPTRG00000018727	SCAF8	100	93.794	ENSLAFG00000000022	SCAF8	100	94.344	Loxodonta_africana
ENSPTRG00000018727	SCAF8	100	99.371	ENSMFAG00000032738	SCAF8	100	99.371	Macaca_fascicularis
ENSPTRG00000018727	SCAF8	100	99.371	ENSMMUG00000015163	SCAF8	100	99.371	Macaca_mulatta
ENSPTRG00000018727	SCAF8	100	99.371	ENSMNEG00000043466	SCAF8	100	99.371	Macaca_nemestrina
ENSPTRG00000018727	SCAF8	99	99.207	ENSMLEG00000034845	SCAF8	100	99.220	Mandrillus_leucophaeus
ENSPTRG00000018727	SCAF8	83	65.605	ENSMAMG00000009457	SCAF8	76	64.713	Mastacembelus_armatus
ENSPTRG00000018727	SCAF8	86	69.184	ENSMZEG00005005698	SCAF8	80	68.780	Maylandia_zebra
ENSPTRG00000018727	SCAF8	99	79.860	ENSMGAG00000012762	SCAF8	100	79.627	Meleagris_gallopavo
ENSPTRG00000018727	SCAF8	99	91.442	ENSMAUG00000009513	Scaf8	100	91.442	Mesocricetus_auratus
ENSPTRG00000018727	SCAF8	100	96.384	ENSMICG00000028965	SCAF8	100	96.442	Microcebus_murinus
ENSPTRG00000018727	SCAF8	100	92.453	ENSMOCG00000014950	Scaf8	100	92.453	Microtus_ochrogaster
ENSPTRG00000018727	SCAF8	84	65.228	ENSMMOG00000002216	SCAF8	78	64.213	Mola_mola
ENSPTRG00000018727	SCAF8	99	86.640	ENSMODG00000008301	SCAF8	100	86.761	Monodelphis_domestica
ENSPTRG00000018727	SCAF8	87	67.986	ENSMALG00000011584	SCAF8	78	68.523	Monopterus_albus
ENSPTRG00000018727	SCAF8	100	91.345	MGP_CAROLIEiJ_G0021016	Scaf8	100	91.345	Mus_caroli
ENSPTRG00000018727	SCAF8	100	91.424	ENSMUSG00000046201	Scaf8	100	91.424	Mus_musculus
ENSPTRG00000018727	SCAF8	100	92.132	MGP_PahariEiJ_G0023334	Scaf8	100	92.132	Mus_pahari
ENSPTRG00000018727	SCAF8	100	94.505	ENSMPUG00000001974	SCAF8	100	96.130	Mustela_putorius_furo
ENSPTRG00000018727	SCAF8	100	93.627	ENSMLUG00000029190	SCAF8	100	93.627	Myotis_lucifugus
ENSPTRG00000018727	SCAF8	100	93.160	ENSNGAG00000012332	Scaf8	100	93.160	Nannospalax_galili
ENSPTRG00000018727	SCAF8	100	52.810	ENSNBRG00000009067	SCAF8	100	52.746	Neolamprologus_brichardi
ENSPTRG00000018727	SCAF8	100	99.372	ENSNLEG00000015509	SCAF8	100	99.372	Nomascus_leucogenys
ENSPTRG00000018727	SCAF8	70	92.614	ENSOPRG00000018413	-	76	92.929	Ochotona_princeps
ENSPTRG00000018727	SCAF8	100	95.679	ENSODEG00000007296	SCAF8	100	95.679	Octodon_degus
ENSPTRG00000018727	SCAF8	100	55.359	ENSONIG00000008119	SCAF8	100	55.298	Oreochromis_niloticus
ENSPTRG00000018727	SCAF8	99	96.598	ENSOCUG00000026063	SCAF8	100	96.688	Oryctolagus_cuniculus
ENSPTRG00000018727	SCAF8	86	68.927	ENSORLG00000017358	SCAF8	78	68.927	Oryzias_latipes
ENSPTRG00000018727	SCAF8	86	69.051	ENSORLG00020002214	SCAF8	78	67.788	Oryzias_latipes_hni
ENSPTRG00000018727	SCAF8	86	69.174	ENSORLG00015015779	SCAF8	78	69.174	Oryzias_latipes_hsok
ENSPTRG00000018727	SCAF8	93	56.766	ENSOMEG00000015471	SCAF8	77	66.053	Oryzias_melastigma
ENSPTRG00000018727	SCAF8	100	96.410	ENSOGAG00000034223	SCAF8	100	96.410	Otolemur_garnettii
ENSPTRG00000018727	SCAF8	99	95.008	ENSOARG00000004159	SCAF8	100	95.008	Ovis_aries
ENSPTRG00000018727	SCAF8	100	99.843	ENSPPAG00000039826	SCAF8	100	99.843	Pan_paniscus
ENSPTRG00000018727	SCAF8	100	97.168	ENSPPRG00000023175	SCAF8	100	97.168	Panthera_pardus
ENSPTRG00000018727	SCAF8	99	97.070	ENSPTIG00000014836	SCAF8	100	97.070	Panthera_tigris_altaica
ENSPTRG00000018727	SCAF8	100	99.213	ENSPANG00000017489	SCAF8	100	99.102	Papio_anubis
ENSPTRG00000018727	SCAF8	100	56.929	ENSPKIG00000021212	SCAF8	100	57.078	Paramormyrops_kingsleyae
ENSPTRG00000018727	SCAF8	89	74.265	ENSPSIG00000008614	SCAF8	95	76.972	Pelodiscus_sinensis
ENSPTRG00000018727	SCAF8	99	92.155	ENSPEMG00000010531	Scaf8	100	92.155	Peromyscus_maniculatus_bairdii
ENSPTRG00000018727	SCAF8	100	87.588	ENSPCIG00000001141	SCAF8	100	87.588	Phascolarctos_cinereus
ENSPTRG00000018727	SCAF8	100	54.767	ENSPFOG00000004176	SCAF8	100	55.057	Poecilia_formosa
ENSPTRG00000018727	SCAF8	85	69.174	ENSPLAG00000021432	SCAF8	77	68.681	Poecilia_latipinna
ENSPTRG00000018727	SCAF8	85	69.297	ENSPMEG00000007591	SCAF8	84	68.129	Poecilia_mexicana
ENSPTRG00000018727	SCAF8	85	69.174	ENSPREG00000000652	SCAF8	77	68.681	Poecilia_reticulata
ENSPTRG00000018727	SCAF8	100	98.036	ENSPPYG00000017121	SCAF8	100	98.824	Pongo_abelii
ENSPTRG00000018727	SCAF8	85	97.152	ENSPCAG00000013044	SCAF8	90	97.152	Procavia_capensis
ENSPTRG00000018727	SCAF8	100	96.698	ENSPCOG00000002067	SCAF8	100	96.637	Propithecus_coquereli
ENSPTRG00000018727	SCAF8	99	92.332	ENSPVAG00000005582	SCAF8	100	93.450	Pteropus_vampyrus
ENSPTRG00000018727	SCAF8	86	69.306	ENSPNYG00000007277	SCAF8	80	68.902	Pundamilia_nyererei
ENSPTRG00000018727	SCAF8	86	68.666	ENSPNAG00000024740	SCAF8	82	68.911	Pygocentrus_nattereri
ENSPTRG00000018727	SCAF8	100	91.660	ENSRNOG00000016919	Scaf8	100	91.660	Rattus_norvegicus
ENSPTRG00000018727	SCAF8	100	99.135	ENSRBIG00000035769	SCAF8	100	99.135	Rhinopithecus_bieti
ENSPTRG00000018727	SCAF8	100	99.213	ENSRROG00000013580	SCAF8	100	99.213	Rhinopithecus_roxellana
ENSPTRG00000018727	SCAF8	100	98.190	ENSSBOG00000027023	SCAF8	100	98.190	Saimiri_boliviensis_boliviensis
ENSPTRG00000018727	SCAF8	100	86.892	ENSSHAG00000009915	SCAF8	100	86.892	Sarcophilus_harrisii
ENSPTRG00000018727	SCAF8	100	54.573	ENSSFOG00015009481	SCAF8	93	70.263	Scleropages_formosus
ENSPTRG00000018727	SCAF8	87	68.067	ENSSMAG00000008275	SCAF8	77	67.467	Scophthalmus_maximus
ENSPTRG00000018727	SCAF8	100	77.660	ENSSPUG00000015219	SCAF8	100	77.870	Sphenodon_punctatus
ENSPTRG00000018727	SCAF8	100	95.987	ENSSSCG00000004070	SCAF8	100	95.987	Sus_scrofa
ENSPTRG00000018727	SCAF8	99	80.267	ENSTGUG00000011151	SCAF8	100	80.503	Taeniopygia_guttata
ENSPTRG00000018727	SCAF8	85	67.857	ENSTRUG00000009243	SCAF8	78	67.857	Takifugu_rubripes
ENSPTRG00000018727	SCAF8	93	65.343	ENSTNIG00000016885	SCAF8	100	65.306	Tetraodon_nigroviridis
ENSPTRG00000018727	SCAF8	99	95.638	ENSTTRG00000014538	SCAF8	100	95.638	Tursiops_truncatus
ENSPTRG00000018727	SCAF8	100	96.459	ENSUAMG00000024736	SCAF8	99	96.431	Ursus_americanus
ENSPTRG00000018727	SCAF8	98	96.469	ENSUMAG00000013404	SCAF8	100	96.469	Ursus_maritimus
ENSPTRG00000018727	SCAF8	68	84.125	ENSVPAG00000012465	SCAF8	99	85.104	Vicugna_pacos
ENSPTRG00000018727	SCAF8	99	96.358	ENSVVUG00000007532	SCAF8	100	96.448	Vulpes_vulpes
ENSPTRG00000018727	SCAF8	100	61.562	ENSXETG00000013132	scaf8	100	61.580	Xenopus_tropicalis
ENSPTRG00000018727	SCAF8	85	69.174	ENSXMAG00000019192	SCAF8	78	68.804	Xiphophorus_maculatus