EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPTRG00000018739 (Gene tree)
Gene ID: 463094
Gene Symbol: SYNJ2
Alias: -
Full Name: synaptojanin 2
Gene Type: protein_coding
Species: Pan_troglodytes
Status: putative
Strand: Plus strand
Length: 129794 bases
Position: chr6:162278950-162408743
Accession: 12706
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTRP00000075835	Exo_endo_phos	PF03372.23	2.2e-14	1	1
ENSPTRP00000091832	Exo_endo_phos	PF03372.23	2.3e-14	1	1
ENSPTRP00000079890	Exo_endo_phos	PF03372.23	2.6e-14	1	1
ENSPTRP00000031984	Exo_endo_phos	PF03372.23	2.7e-14	1	1
ENSPTRP00000082800	Exo_endo_phos	PF03372.23	2.8e-14	1	1
ENSPTRP00000062520	Exo_endo_phos	PF03372.23	2.8e-14	1	1
ENSPTRP00000075835	DUF1866	PF08952.11	1.2e-60	1	1
ENSPTRP00000091832	DUF1866	PF08952.11	1.2e-60	1	1
ENSPTRP00000079890	DUF1866	PF08952.11	1.4e-60	1	1
ENSPTRP00000082800	DUF1866	PF08952.11	1.5e-60	1	1
ENSPTRP00000031984	DUF1866	PF08952.11	1.5e-60	1	1
ENSPTRP00000062520	DUF1866	PF08952.11	1.5e-60	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTRT00000097329	-	4491	-	ENSPTRP00000062520	1496 (aa)	-	A0A2I3RD07
ENSPTRT00000079841	-	4099	XM_016956535	ENSPTRP00000075835	1251 (aa)	XP_016812024	A0A2I3SFT3
ENSPTRT00000093742	-	7629	XM_016956530	ENSPTRP00000079890	1443 (aa)	XP_016812019	A0A2I3STJ5
ENSPTRT00000034602	-	7573	XM_016956528	ENSPTRP00000031984	1496 (aa)	XP_016812017	K6Z9Z8
ENSPTRT00000078692	-	7438	XM_016956529	ENSPTRP00000082800	1451 (aa)	XP_016812018	A0A2I3T0P4
ENSPTRT00000093498	-	963	-	ENSPTRP00000082031	320 (aa)	-	A0A2I3SYL5
ENSPTRT00000084748	-	4569	XM_016956532	ENSPTRP00000091832	1288 (aa)	XP_016812021	A0A2I3TRG8

Gene Model

Click here to download ENSPTRG00000018739's gene model file

Pathways

Pathway ID	Pathway Name	Source
ptr00562	Inositol phosphate metabolism	KEGG
ptr01100	Metabolic pathways	KEGG
ptr04070	Phosphatidylinositol signaling system	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000018739's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPTRG00000018739	SYNJ2	85	53.568	ENSPTRG00000023787	SYNJ1	99	48.012
ENSPTRG00000018739	SYNJ2	85	53.568	ENSPTRG00000048135	-	99	48.012

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTRG00000018739	SYNJ2	100	99.457	ENSG00000078269	SYNJ2	100	99.457	Homo_sapiens
ENSPTRG00000018739	SYNJ2	97	89.174	ENSAMEG00000009581	SYNJ2	100	81.893	Ailuropoda_melanoleuca
ENSPTRG00000018739	SYNJ2	99	79.010	ENSAPLG00000002563	SYNJ2	99	70.476	Anas_platyrhynchos
ENSPTRG00000018739	SYNJ2	99	75.518	ENSACAG00000004945	SYNJ2	94	71.300	Anolis_carolinensis
ENSPTRG00000018739	SYNJ2	100	96.894	ENSANAG00000026575	SYNJ2	100	96.894	Aotus_nancymaae
ENSPTRG00000018739	SYNJ2	100	88.339	ENSBTAG00000000817	SYNJ2	100	83.400	Bos_taurus
ENSPTRG00000018739	SYNJ2	100	96.739	ENSCJAG00000003570	SYNJ2	100	96.739	Callithrix_jacchus
ENSPTRG00000018739	SYNJ2	97	90.000	ENSCAFG00000000644	SYNJ2	100	85.246	Canis_familiaris
ENSPTRG00000018739	SYNJ2	99	89.277	ENSCAFG00020015809	SYNJ2	98	87.337	Canis_lupus_dingo
ENSPTRG00000018739	SYNJ2	100	87.540	ENSCHIG00000011077	SYNJ2	100	83.379	Capra_hircus
ENSPTRG00000018739	SYNJ2	97	93.377	ENSTSYG00000014342	SYNJ2	97	93.333	Carlito_syrichta
ENSPTRG00000018739	SYNJ2	96	87.490	ENSCAPG00000000287	SYNJ2	95	89.886	Cavia_aperea
ENSPTRG00000018739	SYNJ2	100	91.047	ENSCPOG00000009144	SYNJ2	95	92.979	Cavia_porcellus
ENSPTRG00000018739	SYNJ2	100	96.429	ENSCCAG00000025484	SYNJ2	100	96.429	Cebus_capucinus
ENSPTRG00000018739	SYNJ2	100	97.826	ENSCATG00000042943	SYNJ2	100	97.826	Cercocebus_atys
ENSPTRG00000018739	SYNJ2	100	91.767	ENSCLAG00000004730	SYNJ2	100	86.720	Chinchilla_lanigera
ENSPTRG00000018739	SYNJ2	100	97.682	ENSCSAG00000013130	SYNJ2	100	96.992	Chlorocebus_sabaeus
ENSPTRG00000018739	SYNJ2	52	97.273	ENSCHOG00000000343	-	52	97.273	Choloepus_hoffmanni
ENSPTRG00000018739	SYNJ2	99	80.080	ENSCPBG00000016273	SYNJ2	98	72.787	Chrysemys_picta_bellii
ENSPTRG00000018739	SYNJ2	99	96.643	ENSCANG00000040349	SYNJ2	100	98.002	Colobus_angolensis_palliatus
ENSPTRG00000018739	SYNJ2	100	90.008	ENSCGRG00001004257	Synj2	97	92.649	Cricetulus_griseus_chok1gshd
ENSPTRG00000018739	SYNJ2	96	90.307	ENSCGRG00000001656	Synj2	97	92.649	Cricetulus_griseus_crigri
ENSPTRG00000018739	SYNJ2	97	78.926	ENSDNOG00000015900	SYNJ2	100	84.416	Dasypus_novemcinctus
ENSPTRG00000018739	SYNJ2	98	86.932	ENSDORG00000014128	Synj2	99	82.365	Dipodomys_ordii
ENSPTRG00000018739	SYNJ2	82	92.391	ENSETEG00000017418	SYNJ2	82	92.391	Echinops_telfairi
ENSPTRG00000018739	SYNJ2	100	90.647	ENSEASG00005018902	SYNJ2	100	86.267	Equus_asinus_asinus
ENSPTRG00000018739	SYNJ2	100	90.568	ENSECAG00000012646	SYNJ2	94	86.200	Equus_caballus
ENSPTRG00000018739	SYNJ2	54	77.193	ENSEEUG00000015796	-	58	77.193	Erinaceus_europaeus
ENSPTRG00000018739	SYNJ2	100	89.208	ENSFCAG00000010854	SYNJ2	100	89.053	Felis_catus
ENSPTRG00000018739	SYNJ2	93	78.253	ENSFALG00000012593	SYNJ2	98	70.111	Ficedula_albicollis
ENSPTRG00000018739	SYNJ2	98	90.418	ENSFDAG00000016352	SYNJ2	97	91.975	Fukomys_damarensis
ENSPTRG00000018739	SYNJ2	99	78.480	ENSGALG00000013727	SYNJ2	98	71.277	Gallus_gallus
ENSPTRG00000018739	SYNJ2	99	79.538	ENSGAGG00000009857	SYNJ2	98	72.637	Gopherus_agassizii
ENSPTRG00000018739	SYNJ2	100	99.612	ENSGGOG00000012210	SYNJ2	100	99.612	Gorilla_gorilla
ENSPTRG00000018739	SYNJ2	100	90.967	ENSHGLG00000007534	SYNJ2	95	92.288	Heterocephalus_glaber_female
ENSPTRG00000018739	SYNJ2	99	91.093	ENSHGLG00100009973	SYNJ2	95	92.288	Heterocephalus_glaber_male
ENSPTRG00000018739	SYNJ2	97	91.646	ENSSTOG00000016474	SYNJ2	99	87.363	Ictidomys_tridecemlineatus
ENSPTRG00000018739	SYNJ2	96	88.640	ENSJJAG00000014436	Synj2	100	90.090	Jaculus_jaculus
ENSPTRG00000018739	SYNJ2	85	69.757	ENSLACG00000007316	SYNJ2	99	70.329	Latimeria_chalumnae
ENSPTRG00000018739	SYNJ2	96	87.663	ENSLAFG00000011979	SYNJ2	100	84.780	Loxodonta_africana
ENSPTRG00000018739	SYNJ2	93	97.222	ENSMFAG00000040552	SYNJ2	100	97.222	Macaca_fascicularis
ENSPTRG00000018739	SYNJ2	81	98.092	ENSMMUG00000007153	SYNJ2	100	98.092	Macaca_mulatta
ENSPTRG00000018739	SYNJ2	100	97.826	ENSMNEG00000017211	SYNJ2	100	97.826	Macaca_nemestrina
ENSPTRG00000018739	SYNJ2	100	93.925	ENSMLEG00000024911	SYNJ2	100	93.717	Mandrillus_leucophaeus
ENSPTRG00000018739	SYNJ2	96	77.660	ENSMGAG00000012839	SYNJ2	100	74.215	Meleagris_gallopavo
ENSPTRG00000018739	SYNJ2	100	89.608	ENSMAUG00000022212	Synj2	96	92.269	Mesocricetus_auratus
ENSPTRG00000018739	SYNJ2	100	90.062	ENSMICG00000015804	SYNJ2	100	90.062	Microcebus_murinus
ENSPTRG00000018739	SYNJ2	100	89.688	ENSMOCG00000020054	Synj2	99	90.886	Microtus_ochrogaster
ENSPTRG00000018739	SYNJ2	100	87.141	ENSMODG00000007783	SYNJ2	100	80.876	Monodelphis_domestica
ENSPTRG00000018739	SYNJ2	99	88.640	MGP_CAROLIEiJ_G0021026	Synj2	100	93.333	Mus_caroli
ENSPTRG00000018739	SYNJ2	99	88.622	ENSMUSG00000023805	Synj2	100	93.333	Mus_musculus
ENSPTRG00000018739	SYNJ2	99	89.040	MGP_PahariEiJ_G0023344	Synj2	100	93.182	Mus_pahari
ENSPTRG00000018739	SYNJ2	99	88.301	MGP_SPRETEiJ_G0021931	Synj2	100	92.727	Mus_spretus
ENSPTRG00000018739	SYNJ2	99	87.500	ENSMPUG00000005323	SYNJ2	98	85.942	Mustela_putorius_furo
ENSPTRG00000018739	SYNJ2	94	88.729	ENSMLUG00000000324	SYNJ2	100	83.322	Myotis_lucifugus
ENSPTRG00000018739	SYNJ2	99	91.426	ENSNGAG00000014859	Synj2	98	92.394	Nannospalax_galili
ENSPTRG00000018739	SYNJ2	100	93.904	ENSNLEG00000010750	SYNJ2	100	93.904	Nomascus_leucogenys
ENSPTRG00000018739	SYNJ2	94	83.523	ENSMEUG00000003493	SYNJ2	95	84.113	Notamacropus_eugenii
ENSPTRG00000018739	SYNJ2	93	80.351	ENSOPRG00000009648	SYNJ2	93	80.351	Ochotona_princeps
ENSPTRG00000018739	SYNJ2	100	90.238	ENSODEG00000007709	SYNJ2	94	93.191	Octodon_degus
ENSPTRG00000018739	SYNJ2	97	89.165	ENSOCUG00000004762	SYNJ2	100	84.873	Oryctolagus_cuniculus
ENSPTRG00000018739	SYNJ2	92	89.888	ENSOGAG00000000488	SYNJ2	100	90.320	Otolemur_garnettii
ENSPTRG00000018739	SYNJ2	97	88.468	ENSOARG00000004304	SYNJ2	100	82.413	Ovis_aries
ENSPTRG00000018739	SYNJ2	99	99.465	ENSPPAG00000028831	SYNJ2	99	99.465	Pan_paniscus
ENSPTRG00000018739	SYNJ2	100	89.363	ENSPPRG00000009068	SYNJ2	100	89.208	Panthera_pardus
ENSPTRG00000018739	SYNJ2	97	89.317	ENSPTIG00000018780	SYNJ2	97	89.157	Panthera_tigris_altaica
ENSPTRG00000018739	SYNJ2	100	97.981	ENSPANG00000010755	SYNJ2	100	97.981	Papio_anubis
ENSPTRG00000018739	SYNJ2	95	79.883	ENSPSIG00000014659	SYNJ2	97	73.085	Pelodiscus_sinensis
ENSPTRG00000018739	SYNJ2	97	90.066	ENSPEMG00000006247	Synj2	97	88.654	Peromyscus_maniculatus_bairdii
ENSPTRG00000018739	SYNJ2	100	87.141	ENSPCIG00000010179	SYNJ2	100	81.595	Phascolarctos_cinereus
ENSPTRG00000018739	SYNJ2	100	98.881	ENSPPYG00000017130	SYNJ2	100	97.727	Pongo_abelii
ENSPTRG00000018739	SYNJ2	91	91.935	ENSPCAG00000009217	SYNJ2	91	91.935	Procavia_capensis
ENSPTRG00000018739	SYNJ2	100	92.547	ENSPCOG00000026910	SYNJ2	100	92.547	Propithecus_coquereli
ENSPTRG00000018739	SYNJ2	100	85.942	ENSPVAG00000006131	SYNJ2	100	81.454	Pteropus_vampyrus
ENSPTRG00000018739	SYNJ2	99	87.352	ENSRNOG00000017114	Synj2	97	88.522	Rattus_norvegicus
ENSPTRG00000018739	SYNJ2	97	96.612	ENSRBIG00000044126	SYNJ2	100	94.094	Rhinopithecus_bieti
ENSPTRG00000018739	SYNJ2	100	98.214	ENSRROG00000027755	SYNJ2	100	98.214	Rhinopithecus_roxellana
ENSPTRG00000018739	SYNJ2	100	96.429	ENSSBOG00000034876	SYNJ2	100	96.429	Saimiri_boliviensis_boliviensis
ENSPTRG00000018739	SYNJ2	97	87.028	ENSSHAG00000018881	SYNJ2	100	81.263	Sarcophilus_harrisii
ENSPTRG00000018739	SYNJ2	99	76.278	ENSSPUG00000000491	SYNJ2	99	70.378	Sphenodon_punctatus
ENSPTRG00000018739	SYNJ2	100	89.752	ENSSSCG00000012315	SYNJ2	100	89.519	Sus_scrofa
ENSPTRG00000018739	SYNJ2	96	77.284	ENSTGUG00000011082	SYNJ2	100	73.987	Taeniopygia_guttata
ENSPTRG00000018739	SYNJ2	82	80.781	ENSTBEG00000015827	SYNJ2	85	80.781	Tupaia_belangeri
ENSPTRG00000018739	SYNJ2	96	91.022	ENSTTRG00000009677	SYNJ2	100	80.200	Tursiops_truncatus
ENSPTRG00000018739	SYNJ2	55	78.113	ENSUAMG00000021958	-	98	78.689	Ursus_americanus
ENSPTRG00000018739	SYNJ2	81	82.690	ENSUMAG00000012826	SYNJ2	96	86.397	Ursus_maritimus
ENSPTRG00000018739	SYNJ2	87	77.835	ENSVVUG00000007407	SYNJ2	100	89.750	Vulpes_vulpes
ENSPTRG00000018739	SYNJ2	99	68.341	ENSXETG00000034066	synj2	81	69.819	Xenopus_tropicalis