EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPTRG00000018988 (Gene tree)
Gene ID: 463292
Gene Symbol: TRA2A
Alias: -
Full Name: transformer 2 alpha homolog
Gene Type: protein_coding
Species: Pan_troglodytes
Status: putative
Strand: Minus strand
Length: 29071 bases
Position: chr7:22642106-22671176
Accession: 10054
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTRP00000066341	RRM_1	PF00076.22	1.3e-19	1	1
ENSPTRP00000071754	RRM_1	PF00076.22	2.6e-19	1	1
ENSPTRP00000032448	RRM_1	PF00076.22	2.7e-19	1	1
ENSPTRP00000075400	RRM_1	PF00076.22	2.8e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTRT00000101978	-	849	-	ENSPTRP00000075400	282 (aa)	-	A0A2I3SFY7
ENSPTRT00000086512	-	2488	XM_009452764	ENSPTRP00000066341	181 (aa)	XP_009451039	A0A2J8KZF3
ENSPTRT00000099452	-	840	-	ENSPTRP00000071754	279 (aa)	-	A0A2I3S5B5
ENSPTRT00000035105	-	1836	XM_001158245	ENSPTRP00000032448	282 (aa)	XP_001158245	H2QU97

Gene Model

Click here to download ENSPTRG00000018988's gene model file

Pathways

Pathway ID	Pathway Name	Source
ptr03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000018988's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPTRG00000018988	TRA2A	52	31.250	ENSPTRG00000020830	ELAVL2	65	35.821
ENSPTRG00000018988	TRA2A	52	33.663	ENSPTRG00000009692	SRSF2	57	32.692
ENSPTRG00000018988	TRA2A	60	35.821	ENSPTRG00000000723	ELAVL4	74	35.821
ENSPTRG00000018988	TRA2A	90	65.385	ENSPTRG00000015707	TRA2B	75	71.154
ENSPTRG00000018988	TRA2A	100	100.000	ENSPTRG00000046098	-	100	100.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTRG00000018988	TRA2A	100	100.000	ENSG00000164548	TRA2A	100	100.000	Homo_sapiens
ENSPTRG00000018988	TRA2A	84	83.553	ENSAPOG00000017425	tra2a	91	75.547	Acanthochromis_polyacanthus
ENSPTRG00000018988	TRA2A	99	97.253	ENSAMEG00000003501	TRA2A	84	97.786	Ailuropoda_melanoleuca
ENSPTRG00000018988	TRA2A	84	86.842	ENSACIG00000001333	tra2a	81	87.742	Amphilophus_citrinellus
ENSPTRG00000018988	TRA2A	91	76.015	ENSAOCG00000015445	tra2a	91	76.277	Amphiprion_ocellaris
ENSPTRG00000018988	TRA2A	84	84.211	ENSAPEG00000018557	tra2a	91	76.277	Amphiprion_percula
ENSPTRG00000018988	TRA2A	91	77.491	ENSATEG00000000671	tra2a	91	77.737	Anabas_testudineus
ENSPTRG00000018988	TRA2A	98	93.820	ENSAPLG00000013689	TRA2A	100	94.052	Anas_platyrhynchos
ENSPTRG00000018988	TRA2A	100	96.175	ENSACAG00000013502	TRA2A	100	95.423	Anolis_carolinensis
ENSPTRG00000018988	TRA2A	94	100.000	ENSANAG00000035184	TRA2A	100	79.787	Aotus_nancymaae
ENSPTRG00000018988	TRA2A	91	78.967	ENSACLG00000024845	tra2a	91	79.197	Astatotilapia_calliptera
ENSPTRG00000018988	TRA2A	86	90.000	ENSAMXG00000005553	tra2a	99	84.337	Astyanax_mexicanus
ENSPTRG00000018988	TRA2A	100	99.645	ENSBTAG00000012622	TRA2A	100	99.645	Bos_taurus
ENSPTRG00000018988	TRA2A	100	100.000	ENSCJAG00000001509	-	100	100.000	Callithrix_jacchus
ENSPTRG00000018988	TRA2A	94	98.106	ENSCJAG00000045802	-	100	98.106	Callithrix_jacchus
ENSPTRG00000018988	TRA2A	99	99.642	ENSCAFG00000002788	TRA2A	100	99.642	Canis_familiaris
ENSPTRG00000018988	TRA2A	100	98.343	ENSCAFG00020002745	TRA2A	95	98.819	Canis_lupus_dingo
ENSPTRG00000018988	TRA2A	100	100.000	ENSTSYG00000000388	TRA2A	100	100.000	Carlito_syrichta
ENSPTRG00000018988	TRA2A	87	86.364	ENSCAPG00000017377	TRA2A	89	86.939	Cavia_aperea
ENSPTRG00000018988	TRA2A	100	100.000	ENSCPOG00000010739	TRA2A	100	100.000	Cavia_porcellus
ENSPTRG00000018988	TRA2A	100	100.000	ENSCCAG00000019576	TRA2A	100	100.000	Cebus_capucinus
ENSPTRG00000018988	TRA2A	100	100.000	ENSCATG00000041219	TRA2A	100	100.000	Cercocebus_atys
ENSPTRG00000018988	TRA2A	100	100.000	ENSCLAG00000007917	TRA2A	100	100.000	Chinchilla_lanigera
ENSPTRG00000018988	TRA2A	99	100.000	ENSCSAG00000014051	TRA2A	99	100.000	Chlorocebus_sabaeus
ENSPTRG00000018988	TRA2A	100	100.000	ENSCHOG00000001130	TRA2A	100	99.645	Choloepus_hoffmanni
ENSPTRG00000018988	TRA2A	100	97.238	ENSCPBG00000022466	TRA2A	100	96.479	Chrysemys_picta_bellii
ENSPTRG00000018988	TRA2A	100	100.000	ENSCANG00000031292	TRA2A	100	100.000	Colobus_angolensis_palliatus
ENSPTRG00000018988	TRA2A	100	98.907	ENSCGRG00001019980	Tra2a	100	98.592	Cricetulus_griseus_chok1gshd
ENSPTRG00000018988	TRA2A	100	98.907	ENSCGRG00000006087	Tra2a	100	98.529	Cricetulus_griseus_crigri
ENSPTRG00000018988	TRA2A	91	71.062	ENSCSEG00000012193	tra2a	91	72.101	Cynoglossus_semilaevis
ENSPTRG00000018988	TRA2A	83	77.515	ENSDARG00000007863	tra2a	91	76.727	Danio_rerio
ENSPTRG00000018988	TRA2A	100	100.000	ENSDNOG00000039446	TRA2A	100	99.645	Dasypus_novemcinctus
ENSPTRG00000018988	TRA2A	100	100.000	ENSDORG00000009361	Tra2a	100	99.291	Dipodomys_ordii
ENSPTRG00000018988	TRA2A	100	98.370	ENSETEG00000007250	TRA2A	100	82.230	Echinops_telfairi
ENSPTRG00000018988	TRA2A	100	99.645	ENSEASG00005022002	TRA2A	100	99.645	Equus_asinus_asinus
ENSPTRG00000018988	TRA2A	100	99.645	ENSECAG00000011508	TRA2A	100	99.645	Equus_caballus
ENSPTRG00000018988	TRA2A	100	98.936	ENSEEUG00000015674	TRA2A	100	98.936	Erinaceus_europaeus
ENSPTRG00000018988	TRA2A	77	74.576	ENSELUG00000005846	tra2a	91	69.360	Esox_lucius
ENSPTRG00000018988	TRA2A	100	99.645	ENSFCAG00000005361	TRA2A	100	99.645	Felis_catus
ENSPTRG00000018988	TRA2A	100	93.923	ENSFALG00000009605	TRA2A	100	94.815	Ficedula_albicollis
ENSPTRG00000018988	TRA2A	100	99.451	ENSFDAG00000004949	TRA2A	100	99.293	Fukomys_damarensis
ENSPTRG00000018988	TRA2A	80	82.237	ENSGMOG00000013740	tra2a	92	69.534	Gadus_morhua
ENSPTRG00000018988	TRA2A	100	94.366	ENSGALG00000010973	TRA2A	100	94.366	Gallus_gallus
ENSPTRG00000018988	TRA2A	84	83.439	ENSGACG00000006878	tra2a	91	75.862	Gasterosteus_aculeatus
ENSPTRG00000018988	TRA2A	100	96.133	ENSGAGG00000005793	TRA2A	100	95.775	Gopherus_agassizii
ENSPTRG00000018988	TRA2A	100	100.000	ENSGGOG00000009053	TRA2A	100	100.000	Gorilla_gorilla
ENSPTRG00000018988	TRA2A	91	79.705	ENSHBUG00000018234	tra2a	91	79.927	Haplochromis_burtoni
ENSPTRG00000018988	TRA2A	100	100.000	ENSHGLG00000012168	TRA2A	100	100.000	Heterocephalus_glaber_female
ENSPTRG00000018988	TRA2A	100	100.000	ENSHGLG00100014577	TRA2A	100	100.000	Heterocephalus_glaber_male
ENSPTRG00000018988	TRA2A	61	78.182	ENSHCOG00000018058	-	99	76.786	Hippocampus_comes
ENSPTRG00000018988	TRA2A	100	64.921	ENSHCOG00000006314	tra2a	82	65.031	Hippocampus_comes
ENSPTRG00000018988	TRA2A	63	61.979	ENSHCOG00000006320	tra2a	95	62.304	Hippocampus_comes
ENSPTRG00000018988	TRA2A	100	100.000	ENSSTOG00000012073	TRA2A	100	100.000	Ictidomys_tridecemlineatus
ENSPTRG00000018988	TRA2A	100	100.000	ENSJJAG00000022787	Tra2a	100	99.291	Jaculus_jaculus
ENSPTRG00000018988	TRA2A	86	75.479	ENSLBEG00000005297	tra2a	89	75.758	Labrus_bergylta
ENSPTRG00000018988	TRA2A	91	88.189	ENSLACG00000014765	TRA2A	91	88.372	Latimeria_chalumnae
ENSPTRG00000018988	TRA2A	91	77.491	ENSLOCG00000011615	-	91	77.737	Lepisosteus_oculatus
ENSPTRG00000018988	TRA2A	62	85.841	ENSLOCG00000009558	-	59	79.885	Lepisosteus_oculatus
ENSPTRG00000018988	TRA2A	100	99.647	ENSLAFG00000006598	TRA2A	100	99.647	Loxodonta_africana
ENSPTRG00000018988	TRA2A	100	100.000	ENSMFAG00000043211	TRA2A	100	100.000	Macaca_fascicularis
ENSPTRG00000018988	TRA2A	100	100.000	ENSMMUG00000006286	TRA2A	100	100.000	Macaca_mulatta
ENSPTRG00000018988	TRA2A	100	100.000	ENSMNEG00000040670	TRA2A	100	100.000	Macaca_nemestrina
ENSPTRG00000018988	TRA2A	100	100.000	ENSMLEG00000032154	TRA2A	100	100.000	Mandrillus_leucophaeus
ENSPTRG00000018988	TRA2A	77	80.687	ENSMAMG00000008575	tra2a	90	81.034	Mastacembelus_armatus
ENSPTRG00000018988	TRA2A	91	78.967	ENSMZEG00005009142	tra2a	91	79.197	Maylandia_zebra
ENSPTRG00000018988	TRA2A	100	93.923	ENSMGAG00000010514	TRA2A	100	94.118	Meleagris_gallopavo
ENSPTRG00000018988	TRA2A	100	100.000	ENSMICG00000043639	-	100	100.000	Microcebus_murinus
ENSPTRG00000018988	TRA2A	100	83.978	ENSMICG00000036849	-	93	75.000	Microcebus_murinus
ENSPTRG00000018988	TRA2A	90	91.358	ENSMOCG00000010249	-	65	90.643	Microtus_ochrogaster
ENSPTRG00000018988	TRA2A	71	82.587	ENSMOCG00000006467	-	97	81.592	Microtus_ochrogaster
ENSPTRG00000018988	TRA2A	87	82.166	ENSMMOG00000020174	tra2a	84	79.835	Mola_mola
ENSPTRG00000018988	TRA2A	100	98.895	ENSMODG00000000807	TRA2A	100	98.227	Monodelphis_domestica
ENSPTRG00000018988	TRA2A	86	77.308	ENSMALG00000020875	tra2a	91	76.534	Monopterus_albus
ENSPTRG00000018988	TRA2A	100	98.907	ENSMUSG00000029817	Tra2a	100	98.592	Mus_musculus
ENSPTRG00000018988	TRA2A	100	98.907	MGP_PahariEiJ_G0022115	Tra2a	100	98.239	Mus_pahari
ENSPTRG00000018988	TRA2A	100	98.907	MGP_SPRETEiJ_G0029368	Tra2a	100	98.592	Mus_spretus
ENSPTRG00000018988	TRA2A	100	99.448	ENSMPUG00000013480	TRA2A	100	99.291	Mustela_putorius_furo
ENSPTRG00000018988	TRA2A	100	98.587	ENSMLUG00000013972	TRA2A	100	98.587	Myotis_lucifugus
ENSPTRG00000018988	TRA2A	100	99.448	ENSNGAG00000023805	Tra2a	100	98.582	Nannospalax_galili
ENSPTRG00000018988	TRA2A	84	89.542	ENSNBRG00000005992	tra2a	75	91.026	Neolamprologus_brichardi
ENSPTRG00000018988	TRA2A	100	70.718	ENSNLEG00000029659	-	92	75.949	Nomascus_leucogenys
ENSPTRG00000018988	TRA2A	100	100.000	ENSNLEG00000014794	TRA2A	100	100.000	Nomascus_leucogenys
ENSPTRG00000018988	TRA2A	100	98.901	ENSMEUG00000001202	TRA2A	100	97.880	Notamacropus_eugenii
ENSPTRG00000018988	TRA2A	100	99.448	ENSOPRG00000007606	TRA2A	100	98.582	Ochotona_princeps
ENSPTRG00000018988	TRA2A	100	100.000	ENSODEG00000008335	TRA2A	100	100.000	Octodon_degus
ENSPTRG00000018988	TRA2A	91	78.832	ENSONIG00000004503	tra2a	91	79.061	Oreochromis_niloticus
ENSPTRG00000018988	TRA2A	90	88.760	ENSOANG00000014202	TRA2A	91	88.168	Ornithorhynchus_anatinus
ENSPTRG00000018988	TRA2A	100	100.000	ENSOCUG00000024139	TRA2A	100	99.645	Oryctolagus_cuniculus
ENSPTRG00000018988	TRA2A	84	75.658	ENSORLG00000022191	tra2a	62	73.988	Oryzias_latipes
ENSPTRG00000018988	TRA2A	84	75.000	ENSORLG00020003490	tra2a	62	73.410	Oryzias_latipes_hni
ENSPTRG00000018988	TRA2A	84	74.342	ENSORLG00015015485	tra2a	62	72.832	Oryzias_latipes_hsok
ENSPTRG00000018988	TRA2A	84	73.026	ENSOMEG00000017864	tra2a	61	72.353	Oryzias_melastigma
ENSPTRG00000018988	TRA2A	100	100.000	ENSOGAG00000009733	TRA2A	99	97.143	Otolemur_garnettii
ENSPTRG00000018988	TRA2A	100	98.582	ENSOARG00000013147	TRA2A	100	98.582	Ovis_aries
ENSPTRG00000018988	TRA2A	100	97.283	ENSOARG00000002323	-	100	90.175	Ovis_aries
ENSPTRG00000018988	TRA2A	99	100.000	ENSPPAG00000034382	TRA2A	100	100.000	Pan_paniscus
ENSPTRG00000018988	TRA2A	100	99.645	ENSPPRG00000015216	TRA2A	100	99.645	Panthera_pardus
ENSPTRG00000018988	TRA2A	100	99.645	ENSPTIG00000021114	TRA2A	100	99.645	Panthera_tigris_altaica
ENSPTRG00000018988	TRA2A	100	100.000	ENSPANG00000014541	TRA2A	100	100.000	Papio_anubis
ENSPTRG00000018988	TRA2A	91	76.384	ENSPKIG00000012298	tra2a	91	75.912	Paramormyrops_kingsleyae
ENSPTRG00000018988	TRA2A	100	95.580	ENSPSIG00000014993	TRA2A	91	94.466	Pelodiscus_sinensis
ENSPTRG00000018988	TRA2A	100	99.451	ENSPEMG00000008564	-	100	98.940	Peromyscus_maniculatus_bairdii
ENSPTRG00000018988	TRA2A	90	69.939	ENSPMAG00000007947	tra2a	60	69.048	Petromyzon_marinus
ENSPTRG00000018988	TRA2A	100	99.448	ENSPCIG00000007917	TRA2A	100	98.227	Phascolarctos_cinereus
ENSPTRG00000018988	TRA2A	100	100.000	ENSPPYG00000017728	TRA2A	100	100.000	Pongo_abelii
ENSPTRG00000018988	TRA2A	99	98.929	ENSPCAG00000004148	TRA2A	100	98.929	Procavia_capensis
ENSPTRG00000018988	TRA2A	100	85.816	ENSPCOG00000020465	TRA2A	100	85.816	Propithecus_coquereli
ENSPTRG00000018988	TRA2A	100	99.293	ENSPVAG00000011298	TRA2A	100	99.293	Pteropus_vampyrus
ENSPTRG00000018988	TRA2A	84	87.821	ENSPNYG00000020134	tra2a	77	88.050	Pundamilia_nyererei
ENSPTRG00000018988	TRA2A	90	73.432	ENSPNAG00000000482	tra2a	91	71.533	Pygocentrus_nattereri
ENSPTRG00000018988	TRA2A	100	98.907	ENSRNOG00000009156	Tra2a	100	98.592	Rattus_norvegicus
ENSPTRG00000018988	TRA2A	62	100.000	ENSRBIG00000036805	TRA2A	66	100.000	Rhinopithecus_bieti
ENSPTRG00000018988	TRA2A	100	100.000	ENSRROG00000030758	TRA2A	100	100.000	Rhinopithecus_roxellana
ENSPTRG00000018988	TRA2A	100	100.000	ENSSBOG00000031562	TRA2A	100	100.000	Saimiri_boliviensis_boliviensis
ENSPTRG00000018988	TRA2A	100	99.448	ENSSHAG00000005727	TRA2A	90	95.669	Sarcophilus_harrisii
ENSPTRG00000018988	TRA2A	91	80.237	ENSSFOG00015014004	tra2a	91	75.182	Scleropages_formosus
ENSPTRG00000018988	TRA2A	86	81.410	ENSSMAG00000014242	tra2a	91	73.358	Scophthalmus_maximus
ENSPTRG00000018988	TRA2A	91	83.594	ENSSDUG00000005610	tra2a	91	83.784	Seriola_dumerili
ENSPTRG00000018988	TRA2A	84	87.500	ENSSLDG00000025577	tra2a	82	88.387	Seriola_lalandi_dorsalis
ENSPTRG00000018988	TRA2A	100	78.014	ENSSARG00000012900	TRA2A	100	78.014	Sorex_araneus
ENSPTRG00000018988	TRA2A	100	97.283	ENSSPUG00000006143	TRA2A	100	96.516	Sphenodon_punctatus
ENSPTRG00000018988	TRA2A	91	78.967	ENSSPAG00000004184	tra2a	91	79.197	Stegastes_partitus
ENSPTRG00000018988	TRA2A	100	99.645	ENSSSCG00000015387	TRA2A	100	99.645	Sus_scrofa
ENSPTRG00000018988	TRA2A	86	89.032	ENSTGUG00000002795	TRA2A	81	92.056	Taeniopygia_guttata
ENSPTRG00000018988	TRA2A	100	83.333	ENSTBEG00000013773	TRA2A	100	83.333	Tupaia_belangeri
ENSPTRG00000018988	TRA2A	100	99.291	ENSTTRG00000008922	TRA2A	100	99.291	Tursiops_truncatus
ENSPTRG00000018988	TRA2A	100	98.352	ENSUMAG00000001181	TRA2A	93	99.444	Ursus_maritimus
ENSPTRG00000018988	TRA2A	100	85.461	ENSVPAG00000001829	TRA2A	100	85.461	Vicugna_pacos
ENSPTRG00000018988	TRA2A	100	99.645	ENSVVUG00000001045	TRA2A	100	99.645	Vulpes_vulpes
ENSPTRG00000018988	TRA2A	91	83.270	ENSXETG00000007397	tra2a	91	83.521	Xenopus_tropicalis