EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPTRG00000019147 (Gene tree)
Gene ID: 738366
Gene Symbol: DDX56
Alias: -
Full Name: DEAD-box helicase 56
Gene Type: protein_coding
Species: Pan_troglodytes
Status: putative
Strand: Minus strand
Length: 9362 bases
Position: chr7:44052797-44062158
Accession: 13645
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTRP00000089553	ResIII	PF04851.15	8e-08	1	1
ENSPTRP00000032712	ResIII	PF04851.15	9.1e-08	1	1
ENSPTRP00000089553	DEAD	PF00270.29	1.4e-38	1	1
ENSPTRP00000032712	DEAD	PF00270.29	1.6e-38	1	1
ENSPTRP00000072280	DEAD	PF00270.29	1.3e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTRT00000092620	-	1524	-	ENSPTRP00000089553	507 (aa)	-	A0A2I3TKV6
ENSPTRT00000090521	-	312	-	ENSPTRP00000072280	103 (aa)	-	A0A2I3S5K7
ENSPTRT00000035384	-	3114	XM_001145021	ENSPTRP00000032712	547 (aa)	XP_001145021	H2QUI5

Gene Model

Click here to download ENSPTRG00000019147's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000019147's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPTRG00000019147	DDX56	59	36.066	ENSPTRG00000049911	-	72	40.625
ENSPTRG00000019147	DDX56	58	41.667	ENSPTRG00000010590	DDX39A	72	32.000
ENSPTRG00000019147	DDX56	67	30.601	ENSPTRG00000004450	DDX25	77	30.952
ENSPTRG00000019147	DDX56	50	50.000	ENSPTRG00000012391	DDX18	53	31.856
ENSPTRG00000019147	DDX56	66	30.105	ENSPTRG00000049651	DDX3X	54	30.878
ENSPTRG00000019147	DDX56	57	40.678	ENSPTRG00000008694	EIF4A1	73	31.154
ENSPTRG00000019147	DDX56	94	80.695	ENSPTRG00000052765	-	100	80.502
ENSPTRG00000019147	DDX56	54	55.357	ENSPTRG00000009058	DDX52	57	33.239
ENSPTRG00000019147	DDX56	63	47.692	ENSPTRG00000004353	DDX6	74	31.915
ENSPTRG00000019147	DDX56	68	49.180	ENSPTRG00000011670	DDX1	54	49.180
ENSPTRG00000019147	DDX56	60	48.387	ENSPTRG00000010725	DDX49	78	38.298
ENSPTRG00000019147	DDX56	69	47.887	ENSPTRG00000033743	DDX47	80	35.263
ENSPTRG00000019147	DDX56	57	44.262	ENSPTRG00000008301	-	60	30.677
ENSPTRG00000019147	DDX56	57	38.983	ENSPTRG00000051629	-	76	31.698
ENSPTRG00000019147	DDX56	64	30.312	ENSPTRG00000022488	DDX3Y	55	30.312
ENSPTRG00000019147	DDX56	65	35.821	ENSPTRG00000014369	DDX17	57	30.220

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTRG00000019147	DDX56	100	99.634	ENSG00000136271	DDX56	100	99.634	Homo_sapiens
ENSPTRG00000019147	DDX56	98	64.144	ENSAPOG00000017113	ddx56	98	64.505	Acanthochromis_polyacanthus
ENSPTRG00000019147	DDX56	100	90.859	ENSAMEG00000017711	DDX56	100	90.859	Ailuropoda_melanoleuca
ENSPTRG00000019147	DDX56	92	60.000	ENSACIG00000013747	ddx56	98	66.120	Amphilophus_citrinellus
ENSPTRG00000019147	DDX56	97	64.140	ENSAOCG00000018059	ddx56	99	64.140	Amphiprion_ocellaris
ENSPTRG00000019147	DDX56	88	67.008	ENSAOCG00000015447	-	87	67.008	Amphiprion_ocellaris
ENSPTRG00000019147	DDX56	99	63.685	ENSAPEG00000007267	ddx56	99	63.685	Amphiprion_percula
ENSPTRG00000019147	DDX56	98	63.718	ENSATEG00000005279	ddx56	98	64.493	Anabas_testudineus
ENSPTRG00000019147	DDX56	98	64.144	ENSACLG00000020113	ddx56	98	64.685	Astatotilapia_calliptera
ENSPTRG00000019147	DDX56	98	60.180	ENSAMXG00000019357	ddx56	99	60.541	Astyanax_mexicanus
ENSPTRG00000019147	DDX56	100	92.687	ENSBTAG00000010602	DDX56	100	92.687	Bos_taurus
ENSPTRG00000019147	DDX56	96	41.324	WBGene00016073	C24H12.4	86	41.324	Caenorhabditis_elegans
ENSPTRG00000019147	DDX56	100	97.623	ENSCJAG00000012233	DDX56	100	97.623	Callithrix_jacchus
ENSPTRG00000019147	DDX56	82	89.709	ENSCAFG00000029295	DDX56	100	89.709	Canis_familiaris
ENSPTRG00000019147	DDX56	100	86.496	ENSCAFG00020019695	DDX56	100	86.496	Canis_lupus_dingo
ENSPTRG00000019147	DDX56	100	92.322	ENSCHIG00000014261	DDX56	100	92.322	Capra_hircus
ENSPTRG00000019147	DDX56	100	95.978	ENSTSYG00000008048	DDX56	100	95.978	Carlito_syrichta
ENSPTRG00000019147	DDX56	86	89.218	ENSCAPG00000006286	DDX56	100	89.218	Cavia_aperea
ENSPTRG00000019147	DDX56	100	89.762	ENSCPOG00000003359	DDX56	100	89.762	Cavia_porcellus
ENSPTRG00000019147	DDX56	100	96.344	ENSCCAG00000025303	DDX56	100	96.344	Cebus_capucinus
ENSPTRG00000019147	DDX56	100	98.355	ENSCATG00000039389	DDX56	100	98.355	Cercocebus_atys
ENSPTRG00000019147	DDX56	100	92.322	ENSCLAG00000007666	DDX56	100	92.322	Chinchilla_lanigera
ENSPTRG00000019147	DDX56	100	98.537	ENSCSAG00000015636	DDX56	100	98.537	Chlorocebus_sabaeus
ENSPTRG00000019147	DDX56	97	69.118	ENSCPBG00000024556	DDX56	97	69.118	Chrysemys_picta_bellii
ENSPTRG00000019147	DDX56	91	56.349	ENSCING00000005185	-	97	56.548	Ciona_intestinalis
ENSPTRG00000019147	DDX56	91	54.455	ENSCSAVG00000011266	-	99	54.455	Ciona_savignyi
ENSPTRG00000019147	DDX56	100	98.058	ENSCANG00000028187	DDX56	100	98.058	Colobus_angolensis_palliatus
ENSPTRG00000019147	DDX56	100	90.128	ENSCGRG00001019019	Ddx56	100	90.128	Cricetulus_griseus_chok1gshd
ENSPTRG00000019147	DDX56	100	90.128	ENSCGRG00000011870	Ddx56	100	90.128	Cricetulus_griseus_crigri
ENSPTRG00000019147	DDX56	98	64.209	ENSCSEG00000008368	ddx56	98	64.568	Cynoglossus_semilaevis
ENSPTRG00000019147	DDX56	98	64.545	ENSCVAG00000006499	ddx56	98	64.674	Cyprinodon_variegatus
ENSPTRG00000019147	DDX56	98	63.273	ENSDARG00000020913	ddx56	98	64.364	Danio_rerio
ENSPTRG00000019147	DDX56	86	90.486	ENSDNOG00000036526	DDX56	99	90.486	Dasypus_novemcinctus
ENSPTRG00000019147	DDX56	73	94.667	ENSDORG00000026173	-	100	95.135	Dipodomys_ordii
ENSPTRG00000019147	DDX56	92	49.605	FBgn0001565	Hlc	89	49.605	Drosophila_melanogaster
ENSPTRG00000019147	DDX56	68	97.143	ENSETEG00000002969	-	83	80.542	Echinops_telfairi
ENSPTRG00000019147	DDX56	87	61.474	ENSETEG00000019559	-	100	60.632	Echinops_telfairi
ENSPTRG00000019147	DDX56	98	58.802	ENSEBUG00000009986	ddx56	99	59.528	Eptatretus_burgeri
ENSPTRG00000019147	DDX56	100	92.505	ENSEASG00005017795	DDX56	100	93.419	Equus_asinus_asinus
ENSPTRG00000019147	DDX56	100	92.322	ENSECAG00000019897	DDX56	100	93.294	Equus_caballus
ENSPTRG00000019147	DDX56	86	91.543	ENSEEUG00000004849	DDX56	100	91.543	Erinaceus_europaeus
ENSPTRG00000019147	DDX56	97	65.688	ENSELUG00000004150	ddx56	97	65.876	Esox_lucius
ENSPTRG00000019147	DDX56	99	90.110	ENSFCAG00000010261	DDX56	99	90.476	Felis_catus
ENSPTRG00000019147	DDX56	100	91.590	ENSFDAG00000007128	DDX56	100	91.590	Fukomys_damarensis
ENSPTRG00000019147	DDX56	98	63.771	ENSFHEG00000018008	ddx56	95	68.273	Fundulus_heteroclitus
ENSPTRG00000019147	DDX56	97	62.152	ENSGAFG00000006906	ddx56	97	62.152	Gambusia_affinis
ENSPTRG00000019147	DDX56	94	70.906	ENSGAGG00000006789	DDX56	93	70.906	Gopherus_agassizii
ENSPTRG00000019147	DDX56	100	100.000	ENSGGOG00000012031	DDX56	100	100.000	Gorilla_gorilla
ENSPTRG00000019147	DDX56	92	62.353	ENSHBUG00000015246	ddx56	92	62.209	Haplochromis_burtoni
ENSPTRG00000019147	DDX56	100	91.225	ENSHGLG00000017271	DDX56	100	91.225	Heterocephalus_glaber_female
ENSPTRG00000019147	DDX56	100	91.225	ENSHGLG00100015731	DDX56	100	91.225	Heterocephalus_glaber_male
ENSPTRG00000019147	DDX56	97	64.325	ENSHCOG00000001685	ddx56	97	64.325	Hippocampus_comes
ENSPTRG00000019147	DDX56	98	61.939	ENSIPUG00000006602	ddx56	97	61.939	Ictalurus_punctatus
ENSPTRG00000019147	DDX56	100	92.139	ENSSTOG00000000464	DDX56	100	92.139	Ictidomys_tridecemlineatus
ENSPTRG00000019147	DDX56	99	90.792	ENSJJAG00000014269	Ddx56	100	90.792	Jaculus_jaculus
ENSPTRG00000019147	DDX56	97	63.506	ENSKMAG00000016611	ddx56	98	64.973	Kryptolebias_marmoratus
ENSPTRG00000019147	DDX56	98	63.670	ENSLBEG00000026281	ddx56	98	63.738	Labrus_bergylta
ENSPTRG00000019147	DDX56	97	66.667	ENSLACG00000015551	DDX56	97	66.969	Latimeria_chalumnae
ENSPTRG00000019147	DDX56	99	63.112	ENSLOCG00000015185	ddx56	99	63.958	Lepisosteus_oculatus
ENSPTRG00000019147	DDX56	99	91.697	ENSLAFG00000018206	DDX56	99	91.697	Loxodonta_africana
ENSPTRG00000019147	DDX56	100	98.172	ENSMFAG00000041001	DDX56	100	98.172	Macaca_fascicularis
ENSPTRG00000019147	DDX56	100	97.989	ENSMMUG00000002645	DDX56	100	97.989	Macaca_mulatta
ENSPTRG00000019147	DDX56	100	98.058	ENSMNEG00000028492	DDX56	100	98.058	Macaca_nemestrina
ENSPTRG00000019147	DDX56	100	98.355	ENSMLEG00000043591	DDX56	100	98.355	Mandrillus_leucophaeus
ENSPTRG00000019147	DDX56	98	64.209	ENSMAMG00000007776	ddx56	98	64.568	Mastacembelus_armatus
ENSPTRG00000019147	DDX56	98	64.144	ENSMZEG00005009813	ddx56	98	64.685	Maylandia_zebra
ENSPTRG00000019147	DDX56	80	86.585	ENSMAUG00000019569	-	89	91.026	Mesocricetus_auratus
ENSPTRG00000019147	DDX56	100	95.069	ENSMICG00000005550	DDX56	100	95.069	Microcebus_murinus
ENSPTRG00000019147	DDX56	100	90.676	ENSMOCG00000016782	Ddx56	100	90.676	Microtus_ochrogaster
ENSPTRG00000019147	DDX56	90	67.800	ENSMMOG00000009654	ddx56	94	68.400	Mola_mola
ENSPTRG00000019147	DDX56	100	76.087	ENSMODG00000016137	DDX56	100	76.087	Monodelphis_domestica
ENSPTRG00000019147	DDX56	68	77.143	ENSMALG00000016910	ddx56	99	64.706	Monopterus_albus
ENSPTRG00000019147	DDX56	100	90.494	MGP_CAROLIEiJ_G0016069	Ddx56	100	90.494	Mus_caroli
ENSPTRG00000019147	DDX56	100	90.494	ENSMUSG00000004393	Ddx56	100	90.494	Mus_musculus
ENSPTRG00000019147	DDX56	100	90.311	MGP_PahariEiJ_G0016822	Ddx56	100	90.311	Mus_pahari
ENSPTRG00000019147	DDX56	100	90.494	MGP_SPRETEiJ_G0016911	Ddx56	100	90.494	Mus_spretus
ENSPTRG00000019147	DDX56	100	90.311	ENSMPUG00000018196	DDX56	88	90.311	Mustela_putorius_furo
ENSPTRG00000019147	DDX56	100	91.408	ENSMLUG00000003509	DDX56	100	91.590	Myotis_lucifugus
ENSPTRG00000019147	DDX56	100	91.956	ENSNGAG00000018785	Ddx56	100	91.956	Nannospalax_galili
ENSPTRG00000019147	DDX56	91	67.653	ENSNBRG00000002656	ddx56	92	67.015	Neolamprologus_brichardi
ENSPTRG00000019147	DDX56	100	100.000	ENSNLEG00000003816	DDX56	100	100.000	Nomascus_leucogenys
ENSPTRG00000019147	DDX56	91	77.621	ENSMEUG00000006788	DDX56	100	77.621	Notamacropus_eugenii
ENSPTRG00000019147	DDX56	100	90.128	ENSOPRG00000000292	-	100	90.128	Ochotona_princeps
ENSPTRG00000019147	DDX56	73	93.333	ENSODEG00000014807	DDX56	100	94.933	Octodon_degus
ENSPTRG00000019147	DDX56	98	65.736	ENSONIG00000011509	ddx56	98	65.736	Oreochromis_niloticus
ENSPTRG00000019147	DDX56	67	88.406	ENSOANG00000020827	-	100	74.312	Ornithorhynchus_anatinus
ENSPTRG00000019147	DDX56	71	83.562	ENSOANG00000015987	-	95	71.277	Ornithorhynchus_anatinus
ENSPTRG00000019147	DDX56	97	69.981	ENSOANG00000006320	-	100	70.732	Ornithorhynchus_anatinus
ENSPTRG00000019147	DDX56	100	90.859	ENSOCUG00000022918	DDX56	100	90.859	Oryctolagus_cuniculus
ENSPTRG00000019147	DDX56	97	66.300	ENSORLG00000001434	ddx56	97	66.300	Oryzias_latipes
ENSPTRG00000019147	DDX56	98	65.642	ENSORLG00020015718	ddx56	95	65.642	Oryzias_latipes_hni
ENSPTRG00000019147	DDX56	97	66.300	ENSORLG00015003004	ddx56	93	66.300	Oryzias_latipes_hsok
ENSPTRG00000019147	DDX56	98	65.574	ENSOMEG00000022072	ddx56	97	65.996	Oryzias_melastigma
ENSPTRG00000019147	DDX56	100	93.967	ENSOGAG00000009981	DDX56	100	93.967	Otolemur_garnettii
ENSPTRG00000019147	DDX56	100	92.505	ENSOARG00000015240	DDX56	100	92.505	Ovis_aries
ENSPTRG00000019147	DDX56	100	100.000	ENSPPAG00000029147	DDX56	100	100.000	Pan_paniscus
ENSPTRG00000019147	DDX56	100	78.506	ENSPPAG00000031263	-	100	78.324	Pan_paniscus
ENSPTRG00000019147	DDX56	99	89.927	ENSPPRG00000014594	DDX56	99	89.927	Panthera_pardus
ENSPTRG00000019147	DDX56	86	87.712	ENSPTIG00000019500	DDX56	92	88.136	Panthera_tigris_altaica
ENSPTRG00000019147	DDX56	100	97.989	ENSPANG00000002446	DDX56	100	97.989	Papio_anubis
ENSPTRG00000019147	DDX56	98	64.545	ENSPKIG00000018998	ddx56	98	64.545	Paramormyrops_kingsleyae
ENSPTRG00000019147	DDX56	97	64.432	ENSPMGG00000017421	ddx56	99	64.432	Periophthalmus_magnuspinnatus
ENSPTRG00000019147	DDX56	75	92.208	ENSPEMG00000018351	-	96	87.755	Peromyscus_maniculatus_bairdii
ENSPTRG00000019147	DDX56	100	84.882	ENSPCIG00000009336	DDX56	99	84.882	Phascolarctos_cinereus
ENSPTRG00000019147	DDX56	97	64.481	ENSPFOG00000018658	ddx56	97	64.909	Poecilia_formosa
ENSPTRG00000019147	DDX56	97	64.481	ENSPLAG00000019208	ddx56	97	64.909	Poecilia_latipinna
ENSPTRG00000019147	DDX56	97	64.481	ENSPMEG00000001775	ddx56	97	64.909	Poecilia_mexicana
ENSPTRG00000019147	DDX56	97	64.498	ENSPREG00000015142	ddx56	97	64.498	Poecilia_reticulata
ENSPTRG00000019147	DDX56	100	99.086	ENSPPYG00000017591	DDX56	100	99.086	Pongo_abelii
ENSPTRG00000019147	DDX56	96	90.133	ENSPCAG00000011499	DDX56	100	90.133	Procavia_capensis
ENSPTRG00000019147	DDX56	100	95.858	ENSPCOG00000024864	DDX56	100	95.858	Propithecus_coquereli
ENSPTRG00000019147	DDX56	88	93.023	ENSPVAG00000000791	DDX56	88	93.023	Pteropus_vampyrus
ENSPTRG00000019147	DDX56	98	63.964	ENSPNYG00000019212	ddx56	98	64.505	Pundamilia_nyererei
ENSPTRG00000019147	DDX56	98	63.941	ENSPNAG00000025446	ddx56	99	64.126	Pygocentrus_nattereri
ENSPTRG00000019147	DDX56	100	91.042	ENSRNOG00000004670	Ddx56	100	91.042	Rattus_norvegicus
ENSPTRG00000019147	DDX56	100	98.355	ENSRBIG00000030140	DDX56	100	98.355	Rhinopithecus_bieti
ENSPTRG00000019147	DDX56	100	97.989	ENSRROG00000044428	DDX56	100	97.989	Rhinopithecus_roxellana
ENSPTRG00000019147	DDX56	96	46.083	YLR276C	-	98	42.295	Saccharomyces_cerevisiae
ENSPTRG00000019147	DDX56	100	96.709	ENSSBOG00000034339	DDX56	100	96.709	Saimiri_boliviensis_boliviensis
ENSPTRG00000019147	DDX56	85	84.582	ENSSHAG00000016615	DDX56	98	84.582	Sarcophilus_harrisii
ENSPTRG00000019147	DDX56	98	65.209	ENSSFOG00015012795	ddx56	98	65.209	Scleropages_formosus
ENSPTRG00000019147	DDX56	98	64.079	ENSSMAG00000011280	ddx56	98	64.493	Scophthalmus_maximus
ENSPTRG00000019147	DDX56	98	63.734	ENSSDUG00000023597	ddx56	98	64.991	Seriola_dumerili
ENSPTRG00000019147	DDX56	98	63.734	ENSSLDG00000018369	ddx56	98	64.991	Seriola_lalandi_dorsalis
ENSPTRG00000019147	DDX56	75	89.714	ENSSARG00000014363	DDX56	79	88.398	Sorex_araneus
ENSPTRG00000019147	DDX56	99	68.670	ENSSPUG00000000784	DDX56	96	68.670	Sphenodon_punctatus
ENSPTRG00000019147	DDX56	92	67.188	ENSSPAG00000009392	ddx56	96	66.541	Stegastes_partitus
ENSPTRG00000019147	DDX56	100	92.168	ENSSSCG00000016745	DDX56	100	92.168	Sus_scrofa
ENSPTRG00000019147	DDX56	66	69.118	ENSTGUG00000016252	-	99	69.118	Taeniopygia_guttata
ENSPTRG00000019147	DDX56	99	64.404	ENSTRUG00000018623	ddx56	99	64.404	Takifugu_rubripes
ENSPTRG00000019147	DDX56	98	61.744	ENSTNIG00000013593	ddx56	99	62.100	Tetraodon_nigroviridis
ENSPTRG00000019147	DDX56	100	92.870	ENSTBEG00000007119	DDX56	100	92.870	Tupaia_belangeri
ENSPTRG00000019147	DDX56	86	91.121	ENSTTRG00000010552	DDX56	100	91.121	Tursiops_truncatus
ENSPTRG00000019147	DDX56	100	91.225	ENSUAMG00000014194	DDX56	100	91.225	Ursus_americanus
ENSPTRG00000019147	DDX56	100	91.225	ENSUMAG00000009666	DDX56	100	91.225	Ursus_maritimus
ENSPTRG00000019147	DDX56	72	97.297	ENSVPAG00000000136	-	58	97.297	Vicugna_pacos
ENSPTRG00000019147	DDX56	100	89.762	ENSVVUG00000011905	DDX56	100	89.762	Vulpes_vulpes
ENSPTRG00000019147	DDX56	98	65.756	ENSXETG00000019000	ddx56	99	66.849	Xenopus_tropicalis
ENSPTRG00000019147	DDX56	97	64.165	ENSXCOG00000017413	ddx56	97	64.165	Xiphophorus_couchianus
ENSPTRG00000019147	DDX56	97	64.126	ENSXMAG00000018749	ddx56	97	64.126	Xiphophorus_maculatus