EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPTRG00000019452 (Gene tree)
Gene ID: 104001074
Gene Symbol: -
Alias: -
Full Name: pentatricopeptide repeat-containing protein 1%2C mitochondrial
Gene Type: protein_coding
Species: Pan_troglodytes
Status: putative
Strand: Minus strand
Length: 46271 bases
Position: chr7:102360284-102406554
Accession: 104001074
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTRP00000033280	PPR	PF01535.20	1.2e-14	1	2
ENSPTRP00000033280	PPR	PF01535.20	1.2e-14	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTRT00000036003	-	3208	XM_003318617	ENSPTRP00000033280	700 (aa)	XP_003318665	H2QV03

Gene Model

Click here to download ENSPTRG00000019452's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000019452's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTRG00000019452	-	100	98.429	ENSG00000106246	PTCD1	100	98.429	Homo_sapiens
ENSPTRG00000019452	-	100	98.429	ENSG00000248919	ATP5MF-PTCD1	93	98.429	Homo_sapiens
ENSPTRG00000019452	-	81	46.060	ENSAPOG00000010679	ptcd1	85	46.595	Acanthochromis_polyacanthus
ENSPTRG00000019452	-	100	76.934	ENSAMEG00000006224	-	93	76.934	Ailuropoda_melanoleuca
ENSPTRG00000019452	-	85	48.185	ENSACIG00000017861	ptcd1	85	48.099	Amphilophus_citrinellus
ENSPTRG00000019452	-	92	46.177	ENSAOCG00000020741	-	81	48.805	Amphiprion_ocellaris
ENSPTRG00000019452	-	88	45.527	ENSAOCG00000022617	ptcd1	81	48.208	Amphiprion_ocellaris
ENSPTRG00000019452	-	96	44.877	ENSAPEG00000022632	ptcd1	84	47.284	Amphiprion_percula
ENSPTRG00000019452	-	90	47.731	ENSATEG00000007016	ptcd1	82	48.990	Anabas_testudineus
ENSPTRG00000019452	-	84	60.811	ENSAPLG00000006862	-	93	60.811	Anas_platyrhynchos
ENSPTRG00000019452	-	99	54.339	ENSACAG00000012871	-	92	54.054	Anolis_carolinensis
ENSPTRG00000019452	-	98	88.646	ENSANAG00000035790	-	100	88.646	Aotus_nancymaae
ENSPTRG00000019452	-	87	47.011	ENSACLG00000002824	ptcd1	84	46.926	Astatotilapia_calliptera
ENSPTRG00000019452	-	87	47.031	ENSAMXG00000037292	ptcd1	91	46.646	Astyanax_mexicanus
ENSPTRG00000019452	-	100	76.738	ENSBTAG00000020440	-	87	76.879	Bos_taurus
ENSPTRG00000019452	-	100	88.762	ENSCJAG00000015815	-	100	88.762	Callithrix_jacchus
ENSPTRG00000019452	-	100	75.813	ENSCAFG00000015055	-	93	75.813	Canis_familiaris
ENSPTRG00000019452	-	100	75.813	ENSCAFG00020014480	-	93	75.813	Canis_lupus_dingo
ENSPTRG00000019452	-	100	76.420	ENSCHIG00000027000	-	99	76.562	Capra_hircus
ENSPTRG00000019452	-	100	79.632	ENSTSYG00000029495	-	100	79.491	Carlito_syrichta
ENSPTRG00000019452	-	94	74.355	ENSCAPG00000014660	-	99	74.052	Cavia_aperea
ENSPTRG00000019452	-	100	73.833	ENSCPOG00000001780	-	100	73.550	Cavia_porcellus
ENSPTRG00000019452	-	100	87.074	ENSCCAG00000034025	-	100	87.074	Cebus_capucinus
ENSPTRG00000019452	-	100	93.153	ENSCATG00000040859	-	100	93.153	Cercocebus_atys
ENSPTRG00000019452	-	98	76.791	ENSCLAG00000006354	-	100	75.882	Chinchilla_lanigera
ENSPTRG00000019452	-	91	93.604	ENSCSAG00000017794	-	95	93.448	Chlorocebus_sabaeus
ENSPTRG00000019452	-	97	55.096	ENSCPBG00000020866	-	97	55.234	Chrysemys_picta_bellii
ENSPTRG00000019452	-	82	30.822	ENSCING00000007717	-	95	31.162	Ciona_intestinalis
ENSPTRG00000019452	-	100	92.582	ENSCANG00000023441	-	100	92.439	Colobus_angolensis_palliatus
ENSPTRG00000019452	-	100	72.404	ENSCGRG00001023686	Ptcd1	100	72.262	Cricetulus_griseus_chok1gshd
ENSPTRG00000019452	-	99	72.136	ENSCGRG00000015031	Ptcd1	100	71.994	Cricetulus_griseus_crigri
ENSPTRG00000019452	-	87	46.384	ENSCSEG00000002378	ptcd1	85	46.582	Cynoglossus_semilaevis
ENSPTRG00000019452	-	85	46.242	ENSCVAG00000015826	ptcd1	83	46.305	Cyprinodon_variegatus
ENSPTRG00000019452	-	85	46.865	ENSCVAG00000003621	ptcd1	87	46.932	Cyprinodon_variegatus
ENSPTRG00000019452	-	87	49.361	ENSDARG00000076176	ptcd1	88	49.677	Danio_rerio
ENSPTRG00000019452	-	100	73.174	ENSDNOG00000009957	-	100	73.315	Dasypus_novemcinctus
ENSPTRG00000019452	-	99	72.950	ENSDORG00000000740	Ptcd1	99	72.950	Dipodomys_ordii
ENSPTRG00000019452	-	90	40.883	ENSEBUG00000014515	ptcd1	99	41.653	Eptatretus_burgeri
ENSPTRG00000019452	-	100	78.652	ENSEASG00005002480	-	100	78.511	Equus_asinus_asinus
ENSPTRG00000019452	-	100	78.652	ENSECAG00000016617	-	100	78.511	Equus_caballus
ENSPTRG00000019452	-	92	43.812	ENSELUG00000016517	ptcd1	82	46.945	Esox_lucius
ENSPTRG00000019452	-	100	76.271	ENSFCAG00000015069	-	100	76.271	Felis_catus
ENSPTRG00000019452	-	93	58.260	ENSFALG00000013803	-	92	59.375	Ficedula_albicollis
ENSPTRG00000019452	-	100	75.319	ENSFDAG00000006393	-	100	75.177	Fukomys_damarensis
ENSPTRG00000019452	-	78	46.014	ENSFHEG00000012491	ptcd1	92	46.014	Fundulus_heteroclitus
ENSPTRG00000019452	-	82	48.527	ENSGMOG00000007639	ptcd1	91	48.527	Gadus_morhua
ENSPTRG00000019452	-	87	59.425	ENSGALG00000004711	-	87	59.585	Gallus_gallus
ENSPTRG00000019452	-	86	46.721	ENSGAFG00000013175	ptcd1	85	46.721	Gambusia_affinis
ENSPTRG00000019452	-	86	48.684	ENSGACG00000016607	ptcd1	90	48.748	Gasterosteus_aculeatus
ENSPTRG00000019452	-	92	54.723	ENSGAGG00000021832	-	99	55.022	Gopherus_agassizii
ENSPTRG00000019452	-	99	97.711	ENSGGOG00000015123	-	99	97.711	Gorilla_gorilla
ENSPTRG00000019452	-	87	46.850	ENSHBUG00000018275	ptcd1	84	46.764	Haplochromis_burtoni
ENSPTRG00000019452	-	100	77.163	ENSHGLG00000017621	-	100	77.021	Heterocephalus_glaber_female
ENSPTRG00000019452	-	100	77.163	ENSHGLG00100007218	-	100	77.021	Heterocephalus_glaber_male
ENSPTRG00000019452	-	83	47.856	ENSHCOG00000010784	ptcd1	82	47.595	Hippocampus_comes
ENSPTRG00000019452	-	100	74.157	ENSSTOG00000001682	-	100	74.017	Ictidomys_tridecemlineatus
ENSPTRG00000019452	-	100	72.869	ENSJJAG00000000319	Ptcd1	100	72.869	Jaculus_jaculus
ENSPTRG00000019452	-	83	47.871	ENSKMAG00000008708	ptcd1	80	48.123	Kryptolebias_marmoratus
ENSPTRG00000019452	-	88	47.452	ENSLBEG00000008061	ptcd1	83	48.203	Labrus_bergylta
ENSPTRG00000019452	-	87	58.199	ENSLACG00000011172	ptcd1	86	58.494	Latimeria_chalumnae
ENSPTRG00000019452	-	86	54.386	ENSLOCG00000004833	ptcd1	93	54.682	Lepisosteus_oculatus
ENSPTRG00000019452	-	100	70.687	ENSLAFG00000002588	-	100	70.687	Loxodonta_africana
ENSPTRG00000019452	-	100	93.010	ENSMFAG00000041324	-	100	93.010	Macaca_fascicularis
ENSPTRG00000019452	-	100	92.867	ENSMMUG00000030408	-	100	92.867	Macaca_mulatta
ENSPTRG00000019452	-	100	93.010	ENSMNEG00000043786	-	100	93.010	Macaca_nemestrina
ENSPTRG00000019452	-	100	70.697	ENSMLEG00000031179	-	100	73.466	Mandrillus_leucophaeus
ENSPTRG00000019452	-	90	48.346	ENSMAMG00000007623	ptcd1	86	48.418	Mastacembelus_armatus
ENSPTRG00000019452	-	87	47.002	ENSMZEG00005012722	ptcd1	83	46.916	Maylandia_zebra
ENSPTRG00000019452	-	99	56.596	ENSMGAG00000004211	-	93	56.738	Meleagris_gallopavo
ENSPTRG00000019452	-	100	76.869	ENSMICG00000017428	-	100	77.324	Microcebus_murinus
ENSPTRG00000019452	-	90	46.047	ENSMMOG00000020243	ptcd1	88	47.966	Mola_mola
ENSPTRG00000019452	-	98	58.436	ENSMODG00000001350	-	99	58.436	Monodelphis_domestica
ENSPTRG00000019452	-	84	49.916	ENSMALG00000018442	ptcd1	80	49.915	Monopterus_albus
ENSPTRG00000019452	-	99	73.737	MGP_CAROLIEiJ_G0028011	Ptcd1	99	73.593	Mus_caroli
ENSPTRG00000019452	-	99	73.449	ENSMUSG00000029624	Ptcd1	99	73.304	Mus_musculus
ENSPTRG00000019452	-	99	74.170	MGP_PahariEiJ_G0024580	Ptcd1	99	74.170	Mus_pahari
ENSPTRG00000019452	-	99	73.593	MGP_SPRETEiJ_G0029012	Ptcd1	99	73.449	Mus_spretus
ENSPTRG00000019452	-	100	75.672	ENSMPUG00000016518	-	100	75.847	Mustela_putorius_furo
ENSPTRG00000019452	-	100	78.059	ENSMLUG00000010994	-	94	77.918	Myotis_lucifugus
ENSPTRG00000019452	-	87	46.377	ENSNBRG00000010079	ptcd1	84	47.508	Neolamprologus_brichardi
ENSPTRG00000019452	-	100	92.440	ENSNLEG00000011060	-	100	92.440	Nomascus_leucogenys
ENSPTRG00000019452	-	97	62.663	ENSMEUG00000006930	-	99	62.663	Notamacropus_eugenii
ENSPTRG00000019452	-	89	76.815	ENSOPRG00000013647	-	89	76.815	Ochotona_princeps
ENSPTRG00000019452	-	87	45.396	ENSONIG00000003168	ptcd1	99	45.307	Oreochromis_niloticus
ENSPTRG00000019452	-	88	54.167	ENSOANG00000007728	-	73	57.658	Ornithorhynchus_anatinus
ENSPTRG00000019452	-	99	73.000	ENSOCUG00000010584	-	97	72.857	Oryctolagus_cuniculus
ENSPTRG00000019452	-	85	47.934	ENSORLG00000009275	ptcd1	85	47.848	Oryzias_latipes
ENSPTRG00000019452	-	85	47.438	ENSORLG00020000988	ptcd1	85	47.351	Oryzias_latipes_hni
ENSPTRG00000019452	-	85	47.517	ENSORLG00015010557	ptcd1	85	47.430	Oryzias_latipes_hsok
ENSPTRG00000019452	-	87	47.173	ENSOMEG00000020627	ptcd1	88	47.164	Oryzias_melastigma
ENSPTRG00000019452	-	99	74.714	ENSOGAG00000010877	-	100	74.571	Otolemur_garnettii
ENSPTRG00000019452	-	100	72.482	ENSOARG00000018676	-	100	72.624	Ovis_aries
ENSPTRG00000019452	-	100	99.429	ENSPPAG00000036024	-	100	99.429	Pan_paniscus
ENSPTRG00000019452	-	100	76.312	ENSPPRG00000003478	-	100	76.312	Panthera_pardus
ENSPTRG00000019452	-	100	93.010	ENSPANG00000016730	-	100	93.010	Papio_anubis
ENSPTRG00000019452	-	96	48.830	ENSPKIG00000014215	ptcd1	97	48.834	Paramormyrops_kingsleyae
ENSPTRG00000019452	-	85	58.472	ENSPSIG00000011184	-	100	58.970	Pelodiscus_sinensis
ENSPTRG00000019452	-	73	41.524	ENSPMAG00000009667	ptcd1	99	41.524	Petromyzon_marinus
ENSPTRG00000019452	-	99	58.728	ENSPCIG00000024778	-	99	58.728	Phascolarctos_cinereus
ENSPTRG00000019452	-	83	46.231	ENSPFOG00000004458	ptcd1	82	46.812	Poecilia_formosa
ENSPTRG00000019452	-	86	45.990	ENSPLAG00000011051	ptcd1	82	47.138	Poecilia_latipinna
ENSPTRG00000019452	-	83	46.734	ENSPMEG00000020547	ptcd1	85	45.120	Poecilia_mexicana
ENSPTRG00000019452	-	85	46.129	ENSPREG00000000059	ptcd1	84	46.129	Poecilia_reticulata
ENSPTRG00000019452	-	95	96.526	ENSPPYG00000017377	-	100	96.526	Pongo_abelii
ENSPTRG00000019452	-	81	73.103	ENSPCAG00000001852	-	88	73.103	Procavia_capensis
ENSPTRG00000019452	-	99	78.317	ENSPCOG00000018596	-	99	78.632	Propithecus_coquereli
ENSPTRG00000019452	-	67	88.000	ENSPVAG00000007529	-	72	88.000	Pteropus_vampyrus
ENSPTRG00000019452	-	87	46.688	ENSPNYG00000019993	ptcd1	84	46.602	Pundamilia_nyererei
ENSPTRG00000019452	-	92	49.618	ENSPNAG00000014931	ptcd1	90	49.763	Pygocentrus_nattereri
ENSPTRG00000019452	-	98	73.217	ENSRNOG00000000987	Ptcd1	98	73.217	Rattus_norvegicus
ENSPTRG00000019452	-	100	93.010	ENSRBIG00000043393	-	100	92.867	Rhinopithecus_bieti
ENSPTRG00000019452	-	100	92.867	ENSRROG00000036420	-	100	92.725	Rhinopithecus_roxellana
ENSPTRG00000019452	-	100	88.177	ENSSBOG00000024114	-	100	88.177	Saimiri_boliviensis_boliviensis
ENSPTRG00000019452	-	98	57.123	ENSSHAG00000011376	-	98	62.112	Sarcophilus_harrisii
ENSPTRG00000019452	-	85	53.344	ENSSFOG00015007909	ptcd1	81	53.859	Scleropages_formosus
ENSPTRG00000019452	-	87	46.290	ENSSMAG00000000218	ptcd1	94	46.440	Scophthalmus_maximus
ENSPTRG00000019452	-	88	47.293	ENSSDUG00000015671	ptcd1	86	47.488	Seriola_dumerili
ENSPTRG00000019452	-	88	46.975	ENSSLDG00000014261	ptcd1	86	46.955	Seriola_lalandi_dorsalis
ENSPTRG00000019452	-	99	53.324	ENSSPUG00000003540	-	98	53.846	Sphenodon_punctatus
ENSPTRG00000019452	-	87	47.709	ENSSPAG00000011049	ptcd1	84	47.771	Stegastes_partitus
ENSPTRG00000019452	-	93	77.335	ENSSSCG00000007622	-	98	77.204	Sus_scrofa
ENSPTRG00000019452	-	87	60.685	ENSTGUG00000007563	-	99	61.755	Taeniopygia_guttata
ENSPTRG00000019452	-	87	47.890	ENSTRUG00000013471	ptcd1	79	48.722	Takifugu_rubripes
ENSPTRG00000019452	-	84	48.818	ENSTNIG00000008271	ptcd1	84	48.490	Tetraodon_nigroviridis
ENSPTRG00000019452	-	100	73.870	ENSTBEG00000011021	-	100	73.729	Tupaia_belangeri
ENSPTRG00000019452	-	100	74.290	ENSTTRG00000003006	-	100	74.148	Tursiops_truncatus
ENSPTRG00000019452	-	100	76.620	ENSUAMG00000008049	-	100	76.793	Ursus_americanus
ENSPTRG00000019452	-	99	75.710	ENSVVUG00000008836	-	100	75.710	Vulpes_vulpes
ENSPTRG00000019452	-	86	52.310	ENSXETG00000009891	ptcd1	88	52.303	Xenopus_tropicalis
ENSPTRG00000019452	-	86	46.016	ENSXMAG00000015540	ptcd1	88	44.876	Xiphophorus_maculatus