EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPTRG00000019511 (Gene tree)
Gene ID: 463860
Gene Symbol: SRRT
Alias: -
Full Name: serrate%2C RNA effector molecule
Gene Type: protein_coding
Species: Pan_troglodytes
Status: putative
Strand: Plus strand
Length: 14359 bases
Position: chr7:103915248-103929606
Accession: 4518
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTRP00000082844	ARS2	PF04959.13	2.3e-90	1	1
ENSPTRP00000033409	ARS2	PF04959.13	2.3e-73	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTRT00000036139	-	2508	-	ENSPTRP00000033409	835 (aa)	-	H2QV45
ENSPTRT00000110656	-	3680	XM_003318658	ENSPTRP00000082844	871 (aa)	XP_003318706	K7BA77

Gene Model

Click here to download ENSPTRG00000019511's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000019511's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTRG00000019511	SRRT	100	99.885	ENSG00000087087	SRRT	100	99.885	Homo_sapiens
ENSPTRG00000019511	SRRT	53	76.190	ENSAPOG00000002304	srrt	51	76.190	Acanthochromis_polyacanthus
ENSPTRG00000019511	SRRT	100	94.667	ENSAMEG00000014506	SRRT	100	94.667	Ailuropoda_melanoleuca
ENSPTRG00000019511	SRRT	79	75.974	ENSACIG00000015795	srrt	90	75.974	Amphilophus_citrinellus
ENSPTRG00000019511	SRRT	84	76.407	ENSAOCG00000009693	srrt	85	76.407	Amphiprion_ocellaris
ENSPTRG00000019511	SRRT	98	53.254	ENSAOCG00000009189	-	96	56.286	Amphiprion_ocellaris
ENSPTRG00000019511	SRRT	98	53.254	ENSAPEG00000020016	-	96	56.286	Amphiprion_percula
ENSPTRG00000019511	SRRT	79	75.974	ENSAPEG00000003646	srrt	85	75.974	Amphiprion_percula
ENSPTRG00000019511	SRRT	59	57.988	ENSATEG00000003652	-	85	64.076	Anabas_testudineus
ENSPTRG00000019511	SRRT	81	73.810	ENSATEG00000014425	srrt	88	74.675	Anabas_testudineus
ENSPTRG00000019511	SRRT	99	74.643	ENSACAG00000001014	SRRT	96	77.370	Anolis_carolinensis
ENSPTRG00000019511	SRRT	100	98.743	ENSANAG00000031718	SRRT	100	98.743	Aotus_nancymaae
ENSPTRG00000019511	SRRT	53	74.675	ENSACLG00000013156	srrt	50	74.675	Astatotilapia_calliptera
ENSPTRG00000019511	SRRT	59	58.250	ENSACLG00000009423	-	52	63.617	Astatotilapia_calliptera
ENSPTRG00000019511	SRRT	52	75.930	ENSAMXG00000016671	srrt	50	75.930	Astyanax_mexicanus
ENSPTRG00000019511	SRRT	100	96.689	ENSBTAG00000001134	SRRT	100	96.689	Bos_taurus
ENSPTRG00000019511	SRRT	64	47.656	WBGene00017085	E01A2.2	85	42.857	Caenorhabditis_elegans
ENSPTRG00000019511	SRRT	100	98.400	ENSCJAG00000014917	SRRT	100	98.400	Callithrix_jacchus
ENSPTRG00000019511	SRRT	100	97.831	ENSCAFG00000023538	SRRT	100	97.831	Canis_familiaris
ENSPTRG00000019511	SRRT	100	98.394	ENSCAFG00020013358	SRRT	100	98.394	Canis_lupus_dingo
ENSPTRG00000019511	SRRT	100	96.918	ENSCHIG00000010495	SRRT	100	96.918	Capra_hircus
ENSPTRG00000019511	SRRT	99	92.169	ENSTSYG00000036426	SRRT	99	94.498	Carlito_syrichta
ENSPTRG00000019511	SRRT	99	93.373	ENSCAPG00000013586	SRRT	100	96.871	Cavia_aperea
ENSPTRG00000019511	SRRT	100	97.719	ENSCPOG00000001739	SRRT	100	97.719	Cavia_porcellus
ENSPTRG00000019511	SRRT	100	98.857	ENSCCAG00000015877	SRRT	100	98.857	Cebus_capucinus
ENSPTRG00000019511	SRRT	100	99.312	ENSCATG00000036306	SRRT	100	99.312	Cercocebus_atys
ENSPTRG00000019511	SRRT	100	98.174	ENSCLAG00000007568	SRRT	100	98.174	Chinchilla_lanigera
ENSPTRG00000019511	SRRT	100	98.973	ENSCSAG00000017996	SRRT	100	98.973	Chlorocebus_sabaeus
ENSPTRG00000019511	SRRT	58	94.118	ENSCHOG00000007815	SRRT	69	93.370	Choloepus_hoffmanni
ENSPTRG00000019511	SRRT	77	81.855	ENSCPBG00000011553	SRRT	85	81.004	Chrysemys_picta_bellii
ENSPTRG00000019511	SRRT	100	43.062	ENSCING00000003506	-	54	52.292	Ciona_intestinalis
ENSPTRG00000019511	SRRT	100	40.432	ENSCSAVG00000008394	-	89	54.039	Ciona_savignyi
ENSPTRG00000019511	SRRT	100	99.427	ENSCANG00000034556	SRRT	100	99.427	Colobus_angolensis_palliatus
ENSPTRG00000019511	SRRT	100	96.811	ENSCGRG00001001594	Srrt	100	96.811	Cricetulus_griseus_chok1gshd
ENSPTRG00000019511	SRRT	100	89.432	ENSCGRG00000007292	Srrt	100	89.432	Cricetulus_griseus_crigri
ENSPTRG00000019511	SRRT	53	66.667	ENSCSEG00000017878	srrt	50	67.527	Cynoglossus_semilaevis
ENSPTRG00000019511	SRRT	99	62.204	ENSCVAG00000019848	srrt	96	65.233	Cyprinodon_variegatus
ENSPTRG00000019511	SRRT	95	53.066	ENSCVAG00000017344	-	95	54.324	Cyprinodon_variegatus
ENSPTRG00000019511	SRRT	53	76.674	ENSDARG00000017762	srrt	51	77.538	Danio_rerio
ENSPTRG00000019511	SRRT	100	97.489	ENSDNOG00000003851	SRRT	100	97.489	Dasypus_novemcinctus
ENSPTRG00000019511	SRRT	98	94.063	ENSDORG00000005584	Srrt	98	94.296	Dipodomys_ordii
ENSPTRG00000019511	SRRT	88	50.294	FBgn0033062	Ars2	67	53.066	Drosophila_melanogaster
ENSPTRG00000019511	SRRT	86	93.860	ENSETEG00000016175	SRRT	82	93.860	Echinops_telfairi
ENSPTRG00000019511	SRRT	66	62.500	ENSEBUG00000008517	-	76	65.278	Eptatretus_burgeri
ENSPTRG00000019511	SRRT	100	97.717	ENSEASG00005016956	SRRT	100	97.717	Equus_asinus_asinus
ENSPTRG00000019511	SRRT	100	97.831	ENSECAG00000012292	SRRT	100	97.831	Equus_caballus
ENSPTRG00000019511	SRRT	85	97.727	ENSEEUG00000009117	SRRT	93	97.727	Erinaceus_europaeus
ENSPTRG00000019511	SRRT	98	53.426	ENSELUG00000021216	-	53	64.301	Esox_lucius
ENSPTRG00000019511	SRRT	100	98.059	ENSFCAG00000006855	SRRT	100	98.059	Felis_catus
ENSPTRG00000019511	SRRT	57	53.947	ENSFALG00000007524	-	85	66.667	Ficedula_albicollis
ENSPTRG00000019511	SRRT	100	94.266	ENSFDAG00000021347	SRRT	100	94.266	Fukomys_damarensis
ENSPTRG00000019511	SRRT	76	73.272	ENSFHEG00000002756	srrt	89	74.699	Fundulus_heteroclitus
ENSPTRG00000019511	SRRT	55	55.215	ENSFHEG00000004105	-	93	56.170	Fundulus_heteroclitus
ENSPTRG00000019511	SRRT	99	58.009	ENSGMOG00000018619	srrt	51	70.538	Gadus_morhua
ENSPTRG00000019511	SRRT	53	74.892	ENSGAFG00000005423	srrt	51	74.892	Gambusia_affinis
ENSPTRG00000019511	SRRT	98	51.453	ENSGAFG00000020383	-	54	61.194	Gambusia_affinis
ENSPTRG00000019511	SRRT	98	49.942	ENSGACG00000001100	-	53	61.311	Gasterosteus_aculeatus
ENSPTRG00000019511	SRRT	99	61.163	ENSGACG00000020387	srrt	51	74.624	Gasterosteus_aculeatus
ENSPTRG00000019511	SRRT	100	99.315	ENSGGOG00000001508	SRRT	99	99.315	Gorilla_gorilla
ENSPTRG00000019511	SRRT	53	74.892	ENSHBUG00000002942	srrt	50	74.892	Haplochromis_burtoni
ENSPTRG00000019511	SRRT	100	97.267	ENSHGLG00000008344	Srrt	100	97.267	Heterocephalus_glaber_female
ENSPTRG00000019511	SRRT	100	98.165	ENSHGLG00100018857	Srrt	100	98.165	Heterocephalus_glaber_male
ENSPTRG00000019511	SRRT	98	63.001	ENSHCOG00000005403	srrt	56	71.800	Hippocampus_comes
ENSPTRG00000019511	SRRT	98	50.607	ENSHCOG00000008904	-	56	61.242	Hippocampus_comes
ENSPTRG00000019511	SRRT	100	98.394	ENSSTOG00000013776	SRRT	100	98.394	Ictidomys_tridecemlineatus
ENSPTRG00000019511	SRRT	100	96.560	ENSJJAG00000010446	Srrt	100	96.560	Jaculus_jaculus
ENSPTRG00000019511	SRRT	99	61.659	ENSKMAG00000013599	srrt	54	74.675	Kryptolebias_marmoratus
ENSPTRG00000019511	SRRT	98	51.756	ENSKMAG00000008468	-	53	62.319	Kryptolebias_marmoratus
ENSPTRG00000019511	SRRT	53	74.946	ENSLBEG00000016308	srrt	54	76.724	Labrus_bergylta
ENSPTRG00000019511	SRRT	99	62.230	ENSLACG00000001089	SRRT	96	65.176	Latimeria_chalumnae
ENSPTRG00000019511	SRRT	66	82.099	ENSLOCG00000013658	srrt	52	69.481	Lepisosteus_oculatus
ENSPTRG00000019511	SRRT	100	97.603	ENSLAFG00000007725	SRRT	100	97.603	Loxodonta_africana
ENSPTRG00000019511	SRRT	100	99.541	ENSMFAG00000033745	SRRT	100	99.541	Macaca_fascicularis
ENSPTRG00000019511	SRRT	100	98.973	ENSMMUG00000021255	SRRT	100	98.973	Macaca_mulatta
ENSPTRG00000019511	SRRT	100	98.973	ENSMNEG00000041864	SRRT	100	98.973	Macaca_nemestrina
ENSPTRG00000019511	SRRT	100	99.541	ENSMLEG00000029479	SRRT	100	99.541	Mandrillus_leucophaeus
ENSPTRG00000019511	SRRT	98	52.632	ENSMAMG00000010681	-	96	57.076	Mastacembelus_armatus
ENSPTRG00000019511	SRRT	53	73.753	ENSMAMG00000014311	srrt	51	75.054	Mastacembelus_armatus
ENSPTRG00000019511	SRRT	59	58.250	ENSMZEG00005028002	-	52	63.617	Maylandia_zebra
ENSPTRG00000019511	SRRT	53	74.675	ENSMZEG00005016135	srrt	50	74.675	Maylandia_zebra
ENSPTRG00000019511	SRRT	100	96.575	ENSMAUG00000011386	Srrt	100	96.575	Mesocricetus_auratus
ENSPTRG00000019511	SRRT	100	97.945	ENSMICG00000009471	SRRT	100	97.945	Microcebus_murinus
ENSPTRG00000019511	SRRT	100	96.800	ENSMOCG00000001971	Srrt	100	96.800	Microtus_ochrogaster
ENSPTRG00000019511	SRRT	100	63.572	ENSMMOG00000016399	srrt	54	74.624	Mola_mola
ENSPTRG00000019511	SRRT	92	53.299	ENSMMOG00000011137	-	55	65.665	Mola_mola
ENSPTRG00000019511	SRRT	54	88.075	ENSMODG00000004862	SRRT	90	89.189	Monodelphis_domestica
ENSPTRG00000019511	SRRT	95	59.759	ENSMALG00000018604	srrt	80	71.367	Monopterus_albus
ENSPTRG00000019511	SRRT	62	46.360	ENSMALG00000005567	-	84	52.711	Monopterus_albus
ENSPTRG00000019511	SRRT	100	97.032	MGP_CAROLIEiJ_G0027870	Srrt	100	99.627	Mus_caroli
ENSPTRG00000019511	SRRT	100	97.032	ENSMUSG00000037364	Srrt	99	99.627	Mus_musculus
ENSPTRG00000019511	SRRT	100	96.804	MGP_PahariEiJ_G0024456	Srrt	100	99.254	Mus_pahari
ENSPTRG00000019511	SRRT	100	97.032	MGP_SPRETEiJ_G0028875	Srrt	100	99.627	Mus_spretus
ENSPTRG00000019511	SRRT	100	97.945	ENSMPUG00000015839	SRRT	100	97.945	Mustela_putorius_furo
ENSPTRG00000019511	SRRT	100	97.374	ENSMLUG00000009975	SRRT	100	97.374	Myotis_lucifugus
ENSPTRG00000019511	SRRT	100	96.918	ENSNGAG00000023715	Srrt	100	96.918	Nannospalax_galili
ENSPTRG00000019511	SRRT	53	73.536	ENSNBRG00000019100	srrt	52	73.536	Neolamprologus_brichardi
ENSPTRG00000019511	SRRT	100	87.247	ENSNLEG00000011987	SRRT	100	90.085	Nomascus_leucogenys
ENSPTRG00000019511	SRRT	98	74.825	ENSMEUG00000011941	SRRT	98	75.291	Notamacropus_eugenii
ENSPTRG00000019511	SRRT	66	100.000	ENSOPRG00000002502	-	67	100.000	Ochotona_princeps
ENSPTRG00000019511	SRRT	100	97.592	ENSODEG00000016856	SRRT	100	97.592	Octodon_degus
ENSPTRG00000019511	SRRT	53	75.108	ENSONIG00000004242	srrt	52	74.892	Oreochromis_niloticus
ENSPTRG00000019511	SRRT	98	52.098	ENSONIG00000016080	-	52	63.347	Oreochromis_niloticus
ENSPTRG00000019511	SRRT	99	62.660	ENSORLG00000008120	srrt	52	74.242	Oryzias_latipes
ENSPTRG00000019511	SRRT	99	62.864	ENSORLG00020003058	srrt	52	74.026	Oryzias_latipes_hni
ENSPTRG00000019511	SRRT	99	62.937	ENSORLG00015008062	srrt	52	74.026	Oryzias_latipes_hsok
ENSPTRG00000019511	SRRT	99	62.937	ENSOMEG00000003155	srrt	56	74.459	Oryzias_melastigma
ENSPTRG00000019511	SRRT	98	54.337	ENSOMEG00000006963	-	53	64.530	Oryzias_melastigma
ENSPTRG00000019511	SRRT	100	98.288	ENSOGAG00000017242	SRRT	100	98.288	Otolemur_garnettii
ENSPTRG00000019511	SRRT	100	97.477	ENSOARG00000015645	SRRT	100	97.477	Ovis_aries
ENSPTRG00000019511	SRRT	100	100.000	ENSPPAG00000041090	SRRT	100	100.000	Pan_paniscus
ENSPTRG00000019511	SRRT	100	98.050	ENSPPRG00000009557	SRRT	100	98.050	Panthera_pardus
ENSPTRG00000019511	SRRT	100	97.945	ENSPTIG00000014355	SRRT	100	97.945	Panthera_tigris_altaica
ENSPTRG00000019511	SRRT	100	95.417	ENSPANG00000020763	SRRT	98	96.512	Papio_anubis
ENSPTRG00000019511	SRRT	100	66.510	ENSPKIG00000005434	srrt	54	79.526	Paramormyrops_kingsleyae
ENSPTRG00000019511	SRRT	99	65.476	ENSPKIG00000022212	-	96	67.180	Paramormyrops_kingsleyae
ENSPTRG00000019511	SRRT	99	78.162	ENSPSIG00000016311	SRRT	96	81.020	Pelodiscus_sinensis
ENSPTRG00000019511	SRRT	53	74.675	ENSPMGG00000002841	srrt	56	74.675	Periophthalmus_magnuspinnatus
ENSPTRG00000019511	SRRT	100	96.560	ENSPEMG00000010834	Srrt	100	96.560	Peromyscus_maniculatus_bairdii
ENSPTRG00000019511	SRRT	99	53.011	ENSPMAG00000009614	-	55	64.496	Petromyzon_marinus
ENSPTRG00000019511	SRRT	98	91.405	ENSPCIG00000000816	SRRT	98	92.218	Phascolarctos_cinereus
ENSPTRG00000019511	SRRT	53	74.946	ENSPFOG00000005704	srrt	51	74.946	Poecilia_formosa
ENSPTRG00000019511	SRRT	98	51.146	ENSPFOG00000016554	-	54	60.981	Poecilia_formosa
ENSPTRG00000019511	SRRT	98	51.025	ENSPLAG00000004526	-	55	60.638	Poecilia_latipinna
ENSPTRG00000019511	SRRT	99	61.369	ENSPLAG00000021992	srrt	51	74.459	Poecilia_latipinna
ENSPTRG00000019511	SRRT	95	50.434	ENSPMEG00000001520	-	53	59.910	Poecilia_mexicana
ENSPTRG00000019511	SRRT	79	74.514	ENSPMEG00000001182	srrt	85	74.514	Poecilia_mexicana
ENSPTRG00000019511	SRRT	99	62.383	ENSPREG00000022308	srrt	51	74.946	Poecilia_reticulata
ENSPTRG00000019511	SRRT	100	88.800	ENSPPYG00000017432	SRRT	100	88.800	Pongo_abelii
ENSPTRG00000019511	SRRT	100	93.439	ENSPCAG00000001621	SRRT	100	93.439	Procavia_capensis
ENSPTRG00000019511	SRRT	100	98.174	ENSPCOG00000025751	SRRT	100	98.174	Propithecus_coquereli
ENSPTRG00000019511	SRRT	82	86.994	ENSPVAG00000000834	SRRT	100	90.000	Pteropus_vampyrus
ENSPTRG00000019511	SRRT	53	74.675	ENSPNYG00000018710	srrt	52	74.675	Pundamilia_nyererei
ENSPTRG00000019511	SRRT	78	70.732	ENSPNAG00000010629	srrt	77	64.130	Pygocentrus_nattereri
ENSPTRG00000019511	SRRT	54	84.713	ENSRNOG00000048277	AABR07035787.1	93	84.713	Rattus_norvegicus
ENSPTRG00000019511	SRRT	100	98.973	ENSRBIG00000035718	SRRT	100	98.973	Rhinopithecus_bieti
ENSPTRG00000019511	SRRT	100	98.973	ENSRROG00000030622	SRRT	100	98.973	Rhinopithecus_roxellana
ENSPTRG00000019511	SRRT	100	98.857	ENSSBOG00000033570	SRRT	100	98.857	Saimiri_boliviensis_boliviensis
ENSPTRG00000019511	SRRT	76	84.961	ENSSHAG00000007349	-	100	88.346	Sarcophilus_harrisii
ENSPTRG00000019511	SRRT	99	67.940	ENSSFOG00015017293	srrt	96	67.837	Scleropages_formosus
ENSPTRG00000019511	SRRT	53	61.571	ENSSMAG00000018195	-	98	52.588	Scophthalmus_maximus
ENSPTRG00000019511	SRRT	99	62.676	ENSSMAG00000015342	srrt	54	75.054	Scophthalmus_maximus
ENSPTRG00000019511	SRRT	55	54.021	ENSSDUG00000002051	-	93	54.681	Seriola_dumerili
ENSPTRG00000019511	SRRT	53	74.892	ENSSDUG00000012049	srrt	53	75.758	Seriola_dumerili
ENSPTRG00000019511	SRRT	84	74.675	ENSSLDG00000017477	srrt	85	75.541	Seriola_lalandi_dorsalis
ENSPTRG00000019511	SRRT	89	49.873	ENSSPAG00000018943	-	93	56.867	Stegastes_partitus
ENSPTRG00000019511	SRRT	53	75.054	ENSSPAG00000005665	srrt	51	75.054	Stegastes_partitus
ENSPTRG00000019511	SRRT	100	92.849	ENSSSCG00000024789	SRRT	100	95.405	Sus_scrofa
ENSPTRG00000019511	SRRT	95	51.980	ENSTRUG00000000023	-	51	60.135	Takifugu_rubripes
ENSPTRG00000019511	SRRT	99	61.675	ENSTRUG00000016075	srrt	95	62.659	Takifugu_rubripes
ENSPTRG00000019511	SRRT	98	47.953	ENSTNIG00000003111	-	53	61.620	Tetraodon_nigroviridis
ENSPTRG00000019511	SRRT	78	59.851	ENSTNIG00000011779	srrt	100	61.654	Tetraodon_nigroviridis
ENSPTRG00000019511	SRRT	68	96.382	ENSTBEG00000005212	SRRT	66	96.382	Tupaia_belangeri
ENSPTRG00000019511	SRRT	100	97.374	ENSTTRG00000011104	SRRT	100	97.374	Tursiops_truncatus
ENSPTRG00000019511	SRRT	99	95.324	ENSUAMG00000027997	SRRT	98	97.967	Ursus_americanus
ENSPTRG00000019511	SRRT	100	98.059	ENSUMAG00000011295	SRRT	100	98.059	Ursus_maritimus
ENSPTRG00000019511	SRRT	100	97.831	ENSVVUG00000023572	SRRT	100	97.831	Vulpes_vulpes
ENSPTRG00000019511	SRRT	73	79.861	ENSXETG00000025124	srrt	84	76.180	Xenopus_tropicalis
ENSPTRG00000019511	SRRT	53	50.540	ENSXCOG00000013105	-	90	51.078	Xiphophorus_couchianus
ENSPTRG00000019511	SRRT	80	75.325	ENSXMAG00000007627	srrt	56	75.325	Xiphophorus_maculatus
ENSPTRG00000019511	SRRT	98	51.270	ENSXMAG00000002090	-	54	61.242	Xiphophorus_maculatus