EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPTRG00000019659 (Gene tree)
Gene ID: 739989
Gene Symbol: RBM28
Alias: -
Full Name: RNA binding motif protein 28
Gene Type: protein_coding
Species: Pan_troglodytes
Status: putative
Strand: Minus strand
Length: 33599 bases
Position: chr7:132861164-132894762
Accession: 4488
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTRP00000033659	RRM_1	PF00076.22	2.4e-56	1	3
ENSPTRP00000033659	RRM_1	PF00076.22	2.4e-56	2	3
ENSPTRP00000033659	RRM_1	PF00076.22	2.4e-56	3	3
ENSPTRP00000091798	RRM_1	PF00076.22	1.5e-28	1	2
ENSPTRP00000091798	RRM_1	PF00076.22	1.5e-28	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTRT00000036409	-	2814	XM_001152135	ENSPTRP00000033659	761 (aa)	XP_001152135	H2QVB6
ENSPTRT00000089045	-	1863	-	ENSPTRP00000091798	620 (aa)	-	A0A2I3TRF0

Gene Model

Click here to download ENSPTRG00000019659's gene model file

Pathways

Pathway ID	Pathway Name	Source
ptr03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000019659's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTRG00000019659	RBM28	100	100.000	ENSG00000106344	RBM28	100	100.000	Homo_sapiens
ENSPTRG00000019659	RBM28	76	61.538	ENSAPOG00000015512	rbm28	100	51.407	Acanthochromis_polyacanthus
ENSPTRG00000019659	RBM28	100	93.478	ENSAMEG00000004776	RBM28	92	93.478	Ailuropoda_melanoleuca
ENSPTRG00000019659	RBM28	68	55.238	ENSACIG00000023153	rbm28	100	51.566	Amphilophus_citrinellus
ENSPTRG00000019659	RBM28	76	62.500	ENSAOCG00000000462	rbm28	100	51.125	Amphiprion_ocellaris
ENSPTRG00000019659	RBM28	76	62.500	ENSAPEG00000012996	rbm28	100	51.186	Amphiprion_percula
ENSPTRG00000019659	RBM28	77	65.000	ENSATEG00000001672	rbm28	72	65.000	Anabas_testudineus
ENSPTRG00000019659	RBM28	100	100.000	ENSANAG00000033922	RBM28	100	93.045	Aotus_nancymaae
ENSPTRG00000019659	RBM28	100	52.632	ENSACLG00000025024	rbm28	100	48.826	Astatotilapia_calliptera
ENSPTRG00000019659	RBM28	70	58.864	ENSAMXG00000000763	rbm28	99	59.284	Astyanax_mexicanus
ENSPTRG00000019659	RBM28	100	82.831	ENSBTAG00000017001	RBM28	100	100.000	Bos_taurus
ENSPTRG00000019659	RBM28	100	100.000	ENSCJAG00000017731	RBM28	100	92.520	Callithrix_jacchus
ENSPTRG00000019659	RBM28	100	95.000	ENSCAFG00000001667	RBM28	100	84.928	Canis_familiaris
ENSPTRG00000019659	RBM28	100	95.000	ENSCAFG00020021648	RBM28	100	84.928	Canis_lupus_dingo
ENSPTRG00000019659	RBM28	100	100.000	ENSCHIG00000014146	RBM28	100	84.142	Capra_hircus
ENSPTRG00000019659	RBM28	100	85.733	ENSTSYG00000002892	RBM28	100	95.000	Carlito_syrichta
ENSPTRG00000019659	RBM28	84	61.562	ENSCAPG00000013218	RBM28	100	61.406	Cavia_aperea
ENSPTRG00000019659	RBM28	100	95.000	ENSCPOG00000006253	RBM28	100	83.355	Cavia_porcellus
ENSPTRG00000019659	RBM28	100	100.000	ENSCCAG00000035105	RBM28	100	93.176	Cebus_capucinus
ENSPTRG00000019659	RBM28	100	97.500	ENSCATG00000040497	RBM28	100	97.500	Cercocebus_atys
ENSPTRG00000019659	RBM28	100	79.948	ENSCLAG00000003707	RBM28	90	95.000	Chinchilla_lanigera
ENSPTRG00000019659	RBM28	100	100.000	ENSCSAG00000010161	RBM28	100	96.063	Chlorocebus_sabaeus
ENSPTRG00000019659	RBM28	55	100.000	ENSCHOG00000001994	-	63	88.710	Choloepus_hoffmanni
ENSPTRG00000019659	RBM28	62	62.187	ENSCPBG00000018088	RBM28	87	60.300	Chrysemys_picta_bellii
ENSPTRG00000019659	RBM28	73	41.955	ENSCING00000009238	-	58	41.571	Ciona_intestinalis
ENSPTRG00000019659	RBM28	54	43.768	ENSCSAVG00000007149	-	94	43.491	Ciona_savignyi
ENSPTRG00000019659	RBM28	88	100.000	ENSCANG00000038397	RBM28	100	100.000	Colobus_angolensis_palliatus
ENSPTRG00000019659	RBM28	86	100.000	ENSCGRG00001021278	Rbm28	82	100.000	Cricetulus_griseus_chok1gshd
ENSPTRG00000019659	RBM28	100	100.000	ENSCGRG00000005098	Rbm28	82	100.000	Cricetulus_griseus_crigri
ENSPTRG00000019659	RBM28	100	48.731	ENSCSEG00000004212	rbm28	100	49.303	Cynoglossus_semilaevis
ENSPTRG00000019659	RBM28	85	55.333	ENSCVAG00000010493	rbm28	82	65.000	Cyprinodon_variegatus
ENSPTRG00000019659	RBM28	59	48.052	ENSDARG00000025332	rbm28	100	46.753	Danio_rerio
ENSPTRG00000019659	RBM28	100	100.000	ENSDNOG00000001124	RBM28	100	85.190	Dasypus_novemcinctus
ENSPTRG00000019659	RBM28	79	82.056	ENSDORG00000004184	Rbm28	97	82.056	Dipodomys_ordii
ENSPTRG00000019659	RBM28	100	71.224	ENSETEG00000007130	RBM28	99	71.484	Echinops_telfairi
ENSPTRG00000019659	RBM28	82	48.691	ENSEBUG00000004419	rbm28	93	48.691	Eptatretus_burgeri
ENSPTRG00000019659	RBM28	100	97.500	ENSEASG00005008528	RBM28	100	86.310	Equus_asinus_asinus
ENSPTRG00000019659	RBM28	100	97.500	ENSECAG00000007745	RBM28	100	85.547	Equus_caballus
ENSPTRG00000019659	RBM28	100	95.000	ENSEEUG00000002389	RBM28	82	95.000	Erinaceus_europaeus
ENSPTRG00000019659	RBM28	100	62.500	ENSELUG00000020602	rbm28	100	52.363	Esox_lucius
ENSPTRG00000019659	RBM28	100	100.000	ENSFCAG00000000946	RBM28	100	100.000	Felis_catus
ENSPTRG00000019659	RBM28	100	92.500	ENSFDAG00000010169	RBM28	100	85.321	Fukomys_damarensis
ENSPTRG00000019659	RBM28	81	52.740	ENSGMOG00000007091	rbm28	75	50.000	Gadus_morhua
ENSPTRG00000019659	RBM28	71	55.556	ENSGAFG00000004802	rbm28	97	54.846	Gambusia_affinis
ENSPTRG00000019659	RBM28	75	65.714	ENSGACG00000012612	rbm28	82	52.410	Gasterosteus_aculeatus
ENSPTRG00000019659	RBM28	81	70.443	ENSGAGG00000008873	RBM28	80	79.670	Gopherus_agassizii
ENSPTRG00000019659	RBM28	95	98.892	ENSGGOG00000004644	RBM28	97	98.892	Gorilla_gorilla
ENSPTRG00000019659	RBM28	91	51.429	ENSHBUG00000009611	rbm28	65	56.325	Haplochromis_burtoni
ENSPTRG00000019659	RBM28	100	95.000	ENSHGLG00000005409	RBM28	100	84.928	Heterocephalus_glaber_female
ENSPTRG00000019659	RBM28	100	95.000	ENSHGLG00100016458	RBM28	100	84.010	Heterocephalus_glaber_male
ENSPTRG00000019659	RBM28	68	49.526	ENSIPUG00000007103	rbm28	97	46.626	Ictalurus_punctatus
ENSPTRG00000019659	RBM28	100	93.182	ENSSTOG00000002169	RBM28	100	85.770	Ictidomys_tridecemlineatus
ENSPTRG00000019659	RBM28	96	97.500	ENSJJAG00000022400	Rbm28	80	97.500	Jaculus_jaculus
ENSPTRG00000019659	RBM28	79	67.500	ENSKMAG00000013348	rbm28	69	67.500	Kryptolebias_marmoratus
ENSPTRG00000019659	RBM28	76	65.000	ENSLBEG00000012998	rbm28	100	50.636	Labrus_bergylta
ENSPTRG00000019659	RBM28	68	76.667	ENSLACG00000010485	-	100	55.826	Latimeria_chalumnae
ENSPTRG00000019659	RBM28	86	70.000	ENSLOCG00000015541	rbm28	80	62.371	Lepisosteus_oculatus
ENSPTRG00000019659	RBM28	100	100.000	ENSLAFG00000010717	RBM28	100	82.438	Loxodonta_africana
ENSPTRG00000019659	RBM28	100	97.500	ENSMFAG00000031036	RBM28	100	97.500	Macaca_fascicularis
ENSPTRG00000019659	RBM28	100	97.500	ENSMMUG00000007250	RBM28	100	97.500	Macaca_mulatta
ENSPTRG00000019659	RBM28	100	97.500	ENSMNEG00000036970	RBM28	100	97.500	Macaca_nemestrina
ENSPTRG00000019659	RBM28	84	96.391	ENSMLEG00000037717	RBM28	100	96.391	Mandrillus_leucophaeus
ENSPTRG00000019659	RBM28	100	62.500	ENSMAMG00000008525	rbm28	100	50.316	Mastacembelus_armatus
ENSPTRG00000019659	RBM28	93	48.774	ENSMZEG00005019625	rbm28	69	53.213	Maylandia_zebra
ENSPTRG00000019659	RBM28	100	100.000	ENSMAUG00000002263	Rbm28	82	100.000	Mesocricetus_auratus
ENSPTRG00000019659	RBM28	94	83.221	ENSMICG00000000107	RBM28	100	84.349	Microcebus_murinus
ENSPTRG00000019659	RBM28	100	100.000	ENSMOCG00000014615	Rbm28	81	100.000	Microtus_ochrogaster
ENSPTRG00000019659	RBM28	70	54.483	ENSMMOG00000008600	rbm28	99	52.490	Mola_mola
ENSPTRG00000019659	RBM28	100	87.500	ENSMODG00000015151	RBM28	100	72.987	Monodelphis_domestica
ENSPTRG00000019659	RBM28	77	65.000	ENSMALG00000006419	rbm28	68	65.000	Monopterus_albus
ENSPTRG00000019659	RBM28	100	97.500	MGP_CAROLIEiJ_G0028162	Rbm28	100	80.759	Mus_caroli
ENSPTRG00000019659	RBM28	100	97.500	ENSMUSG00000029701	Rbm28	100	80.366	Mus_musculus
ENSPTRG00000019659	RBM28	100	97.500	MGP_PahariEiJ_G0021920	Rbm28	100	80.759	Mus_pahari
ENSPTRG00000019659	RBM28	100	97.500	MGP_SPRETEiJ_G0029162	Rbm28	100	80.628	Mus_spretus
ENSPTRG00000019659	RBM28	100	100.000	ENSMPUG00000006511	RBM28	100	83.399	Mustela_putorius_furo
ENSPTRG00000019659	RBM28	100	100.000	ENSMLUG00000002186	RBM28	100	85.452	Myotis_lucifugus
ENSPTRG00000019659	RBM28	100	100.000	ENSNGAG00000006480	-	81	100.000	Nannospalax_galili
ENSPTRG00000019659	RBM28	100	92.500	ENSNGAG00000017946	-	100	78.244	Nannospalax_galili
ENSPTRG00000019659	RBM28	100	100.000	ENSNLEG00000012307	RBM28	100	100.000	Nomascus_leucogenys
ENSPTRG00000019659	RBM28	81	87.500	ENSMEUG00000009611	RBM28	91	87.500	Notamacropus_eugenii
ENSPTRG00000019659	RBM28	75	95.000	ENSOPRG00000015140	RBM28	90	76.705	Ochotona_princeps
ENSPTRG00000019659	RBM28	76	88.413	ENSODEG00000013217	-	83	88.413	Octodon_degus
ENSPTRG00000019659	RBM28	100	79.817	ENSODEG00000003213	-	100	79.292	Octodon_degus
ENSPTRG00000019659	RBM28	79	52.954	ENSONIG00000014924	rbm28	71	52.632	Oreochromis_niloticus
ENSPTRG00000019659	RBM28	87	81.463	ENSOANG00000000815	-	95	81.463	Ornithorhynchus_anatinus
ENSPTRG00000019659	RBM28	100	100.000	ENSOCUG00000003009	RBM28	100	82.660	Oryctolagus_cuniculus
ENSPTRG00000019659	RBM28	99	49.373	ENSORLG00000009636	rbm28	69	67.500	Oryzias_latipes
ENSPTRG00000019659	RBM28	77	67.500	ENSORLG00020002123	rbm28	69	67.500	Oryzias_latipes_hni
ENSPTRG00000019659	RBM28	79	72.222	ENSORLG00015015030	rbm28	97	60.784	Oryzias_latipes_hsok
ENSPTRG00000019659	RBM28	77	67.500	ENSOMEG00000007801	rbm28	70	67.500	Oryzias_melastigma
ENSPTRG00000019659	RBM28	100	84.430	ENSOGAG00000006011	RBM28	100	92.500	Otolemur_garnettii
ENSPTRG00000019659	RBM28	100	83.812	ENSOARG00000002547	RBM28	100	83.943	Ovis_aries
ENSPTRG00000019659	RBM28	100	100.000	ENSPPAG00000041730	RBM28	100	100.000	Pan_paniscus
ENSPTRG00000019659	RBM28	100	100.000	ENSPPRG00000004420	RBM28	100	100.000	Panthera_pardus
ENSPTRG00000019659	RBM28	100	100.000	ENSPTIG00000008550	RBM28	100	100.000	Panthera_tigris_altaica
ENSPTRG00000019659	RBM28	100	97.500	ENSPANG00000022295	RBM28	100	97.500	Papio_anubis
ENSPTRG00000019659	RBM28	99	57.500	ENSPKIG00000023453	rbm28	72	57.500	Paramormyrops_kingsleyae
ENSPTRG00000019659	RBM28	89	54.118	ENSPMGG00000012840	rbm28	100	48.752	Periophthalmus_magnuspinnatus
ENSPTRG00000019659	RBM28	96	100.000	ENSPEMG00000020673	Rbm28	100	77.880	Peromyscus_maniculatus_bairdii
ENSPTRG00000019659	RBM28	58	45.337	ENSPMAG00000002948	-	99	46.543	Petromyzon_marinus
ENSPTRG00000019659	RBM28	100	87.500	ENSPCIG00000012810	RBM28	100	71.745	Phascolarctos_cinereus
ENSPTRG00000019659	RBM28	80	65.000	ENSPFOG00000018209	rbm28	100	48.990	Poecilia_formosa
ENSPTRG00000019659	RBM28	79	65.000	ENSPLAG00000016078	rbm28	96	49.229	Poecilia_latipinna
ENSPTRG00000019659	RBM28	80	65.000	ENSPMEG00000004292	rbm28	100	48.990	Poecilia_mexicana
ENSPTRG00000019659	RBM28	78	65.000	ENSPREG00000014287	rbm28	98	48.191	Poecilia_reticulata
ENSPTRG00000019659	RBM28	100	100.000	ENSPPYG00000017975	RBM28	100	98.949	Pongo_abelii
ENSPTRG00000019659	RBM28	64	97.500	ENSPCAG00000008223	RBM28	83	75.556	Procavia_capensis
ENSPTRG00000019659	RBM28	100	100.000	ENSPCOG00000016797	RBM28	100	100.000	Propithecus_coquereli
ENSPTRG00000019659	RBM28	76	91.628	ENSPVAG00000005443	RBM28	76	91.628	Pteropus_vampyrus
ENSPTRG00000019659	RBM28	100	52.632	ENSPNYG00000014003	rbm28	72	52.632	Pundamilia_nyererei
ENSPTRG00000019659	RBM28	100	97.500	ENSRNOG00000005468	Rbm28	82	97.500	Rattus_norvegicus
ENSPTRG00000019659	RBM28	100	100.000	ENSRBIG00000033990	RBM28	100	100.000	Rhinopithecus_bieti
ENSPTRG00000019659	RBM28	100	100.000	ENSRROG00000040747	RBM28	100	100.000	Rhinopithecus_roxellana
ENSPTRG00000019659	RBM28	82	100.000	ENSSBOG00000012308	RBM28	100	90.814	Saimiri_boliviensis_boliviensis
ENSPTRG00000019659	RBM28	96	67.707	ENSSHAG00000017017	RBM28	99	67.112	Sarcophilus_harrisii
ENSPTRG00000019659	RBM28	81	62.500	ENSSFOG00015001231	rbm28	75	62.500	Scleropages_formosus
ENSPTRG00000019659	RBM28	70	52.968	ENSSMAG00000003885	rbm28	98	50.939	Scophthalmus_maximus
ENSPTRG00000019659	RBM28	77	57.500	ENSSLDG00000020099	rbm28	100	50.636	Seriola_lalandi_dorsalis
ENSPTRG00000019659	RBM28	71	97.500	ENSSARG00000008303	RBM28	81	85.464	Sorex_araneus
ENSPTRG00000019659	RBM28	66	73.529	ENSSPUG00000000838	RBM28	79	73.529	Sphenodon_punctatus
ENSPTRG00000019659	RBM28	70	53.319	ENSSPAG00000023305	rbm28	100	49.384	Stegastes_partitus
ENSPTRG00000019659	RBM28	100	100.000	ENSSSCG00000031847	RBM28	100	84.928	Sus_scrofa
ENSPTRG00000019659	RBM28	99	65.000	ENSTNIG00000017962	rbm28	99	50.968	Tetraodon_nigroviridis
ENSPTRG00000019659	RBM28	86	87.870	ENSTBEG00000012749	RBM28	94	71.866	Tupaia_belangeri
ENSPTRG00000019659	RBM28	100	100.000	ENSTTRG00000013647	RBM28	100	82.199	Tursiops_truncatus
ENSPTRG00000019659	RBM28	100	100.000	ENSUAMG00000006949	RBM28	100	77.546	Ursus_americanus
ENSPTRG00000019659	RBM28	100	85.059	ENSUMAG00000005997	RBM28	100	84.666	Ursus_maritimus
ENSPTRG00000019659	RBM28	94	73.630	ENSVPAG00000008304	RBM28	87	76.084	Vicugna_pacos
ENSPTRG00000019659	RBM28	100	95.000	ENSVVUG00000007270	RBM28	100	84.666	Vulpes_vulpes
ENSPTRG00000019659	RBM28	99	67.500	ENSXETG00000009271	rbm28	99	56.354	Xenopus_tropicalis
ENSPTRG00000019659	RBM28	71	53.986	ENSXCOG00000020357	rbm28	99	52.201	Xiphophorus_couchianus
ENSPTRG00000019659	RBM28	79	67.500	ENSXMAG00000004415	rbm28	82	67.500	Xiphophorus_maculatus