EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPTRG00000019727 (Gene tree)
Gene ID: 463751
Gene Symbol: CNOT4
Alias: -
Full Name: CCR4-NOT transcription complex subunit 4
Gene Type: protein_coding
Species: Pan_troglodytes
Status: putative
Strand: Minus strand
Length: 76565 bases
Position: chr7:139925917-140002481
Accession: 7368
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTRP00000084639	RRM_1	PF00076.22	7.8e-06	1	1
ENSPTRP00000079121	RRM_1	PF00076.22	8.5e-06	1	1
ENSPTRP00000077695	RRM_1	PF00076.22	1.4e-05	1	1
ENSPTRP00000088241	RRM_1	PF00076.22	1.7e-05	1	1
ENSPTRP00000033796	RRM_1	PF00076.22	2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTRT00000081814	-	963	-	ENSPTRP00000079121	320 (aa)	-	A0A2I3SQ81
ENSPTRT00000088821	-	1302	-	ENSPTRP00000084639	433 (aa)	-	A0A2I3T5W6
ENSPTRT00000109364	-	2937	XM_001145798	ENSPTRP00000088241	642 (aa)	XP_001145798	K7B4J8
ENSPTRT00000106039	-	4610	XM_001145560	ENSPTRP00000077695	575 (aa)	XP_001145560	A0A2I3SL52
ENSPTRT00000078927	-	507	-	ENSPTRP00000091916	168 (aa)	-	A0A2I3TSG9
ENSPTRT00000036554	-	3229	XM_001145725	ENSPTRP00000033796	712 (aa)	XP_001145725	H2QVF4

Gene Model

Click here to download ENSPTRG00000019727's gene model file

Pathways

Pathway ID	Pathway Name	Source
ptr03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000019727's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTRG00000019727	CNOT4	100	99.844	ENSG00000080802	CNOT4	100	99.844	Homo_sapiens
ENSPTRG00000019727	CNOT4	97	89.299	ENSAPOG00000016272	cnot4a	83	89.299	Acanthochromis_polyacanthus
ENSPTRG00000019727	CNOT4	97	99.286	ENSAMEG00000012081	CNOT4	92	98.174	Ailuropoda_melanoleuca
ENSPTRG00000019727	CNOT4	85	89.299	ENSACIG00000003011	cnot4a	100	60.347	Amphilophus_citrinellus
ENSPTRG00000019727	CNOT4	99	89.299	ENSAOCG00000010792	cnot4a	92	89.299	Amphiprion_ocellaris
ENSPTRG00000019727	CNOT4	99	89.299	ENSAPEG00000004680	cnot4a	92	89.299	Amphiprion_percula
ENSPTRG00000019727	CNOT4	99	88.930	ENSATEG00000017580	cnot4a	92	88.930	Anabas_testudineus
ENSPTRG00000019727	CNOT4	100	88.583	ENSAPLG00000016441	CNOT4	100	88.583	Anas_platyrhynchos
ENSPTRG00000019727	CNOT4	100	88.451	ENSACAG00000011154	CNOT4	100	88.451	Anolis_carolinensis
ENSPTRG00000019727	CNOT4	100	99.307	ENSANAG00000032156	CNOT4	100	100.000	Aotus_nancymaae
ENSPTRG00000019727	CNOT4	100	88.321	ENSACLG00000002514	cnot4a	92	88.321	Astatotilapia_calliptera
ENSPTRG00000019727	CNOT4	99	93.962	ENSAMXG00000011473	cnot4b	100	71.704	Astyanax_mexicanus
ENSPTRG00000019727	CNOT4	97	83.294	ENSAMXG00000001373	cnot4a	100	71.689	Astyanax_mexicanus
ENSPTRG00000019727	CNOT4	100	99.065	ENSBTAG00000017919	CNOT4	100	99.065	Bos_taurus
ENSPTRG00000019727	CNOT4	100	100.000	ENSCJAG00000012532	CNOT4	100	100.000	Callithrix_jacchus
ENSPTRG00000019727	CNOT4	100	99.377	ENSCAFG00000003223	CNOT4	100	99.377	Canis_familiaris
ENSPTRG00000019727	CNOT4	100	98.754	ENSCAFG00020000093	CNOT4	100	98.754	Canis_lupus_dingo
ENSPTRG00000019727	CNOT4	100	98.457	ENSCHIG00000010955	CNOT4	100	98.457	Capra_hircus
ENSPTRG00000019727	CNOT4	100	99.065	ENSTSYG00000000893	CNOT4	100	99.065	Carlito_syrichta
ENSPTRG00000019727	CNOT4	100	95.483	ENSCAPG00000006213	CNOT4	100	95.483	Cavia_aperea
ENSPTRG00000019727	CNOT4	100	98.287	ENSCPOG00000011526	CNOT4	100	98.287	Cavia_porcellus
ENSPTRG00000019727	CNOT4	100	99.688	ENSCCAG00000024414	CNOT4	100	99.688	Cebus_capucinus
ENSPTRG00000019727	CNOT4	100	100.000	ENSCATG00000022607	CNOT4	100	100.000	Cercocebus_atys
ENSPTRG00000019727	CNOT4	100	98.131	ENSCLAG00000001857	CNOT4	100	98.131	Chinchilla_lanigera
ENSPTRG00000019727	CNOT4	100	99.158	ENSCSAG00000009096	CNOT4	100	99.158	Chlorocebus_sabaeus
ENSPTRG00000019727	CNOT4	70	99.465	ENSCHOG00000010412	CNOT4	65	99.465	Choloepus_hoffmanni
ENSPTRG00000019727	CNOT4	100	95.933	ENSCPBG00000004959	CNOT4	100	95.933	Chrysemys_picta_bellii
ENSPTRG00000019727	CNOT4	78	69.323	ENSCING00000004364	-	89	43.079	Ciona_intestinalis
ENSPTRG00000019727	CNOT4	100	100.000	ENSCANG00000029319	CNOT4	100	100.000	Colobus_angolensis_palliatus
ENSPTRG00000019727	CNOT4	100	98.910	ENSCGRG00001014651	Cnot4	100	98.910	Cricetulus_griseus_chok1gshd
ENSPTRG00000019727	CNOT4	100	98.910	ENSCGRG00000005727	Cnot4	100	98.910	Cricetulus_griseus_crigri
ENSPTRG00000019727	CNOT4	97	89.299	ENSCSEG00000015080	cnot4a	84	89.299	Cynoglossus_semilaevis
ENSPTRG00000019727	CNOT4	100	88.321	ENSCVAG00000009399	cnot4a	100	74.046	Cyprinodon_variegatus
ENSPTRG00000019727	CNOT4	97	73.770	ENSDARG00000007639	cnot4b	100	66.087	Danio_rerio
ENSPTRG00000019727	CNOT4	85	89.668	ENSDARG00000007045	cnot4a	100	69.330	Danio_rerio
ENSPTRG00000019727	CNOT4	100	98.177	ENSDNOG00000009409	CNOT4	100	98.177	Dasypus_novemcinctus
ENSPTRG00000019727	CNOT4	100	98.957	ENSDORG00000012268	Cnot4	100	98.957	Dipodomys_ordii
ENSPTRG00000019727	CNOT4	100	92.987	ENSETEG00000013407	CNOT4	89	95.536	Echinops_telfairi
ENSPTRG00000019727	CNOT4	100	98.754	ENSEASG00005014430	CNOT4	100	98.754	Equus_asinus_asinus
ENSPTRG00000019727	CNOT4	100	98.754	ENSECAG00000020262	CNOT4	100	98.754	Equus_caballus
ENSPTRG00000019727	CNOT4	96	79.153	ENSELUG00000011540	cnot4b	97	71.508	Esox_lucius
ENSPTRG00000019727	CNOT4	99	90.637	ENSELUG00000008742	cnot4a	90	90.637	Esox_lucius
ENSPTRG00000019727	CNOT4	100	98.754	ENSFCAG00000011904	CNOT4	100	98.754	Felis_catus
ENSPTRG00000019727	CNOT4	100	88.976	ENSFALG00000011194	CNOT4	100	88.976	Ficedula_albicollis
ENSPTRG00000019727	CNOT4	100	98.910	ENSFDAG00000013525	CNOT4	100	98.910	Fukomys_damarensis
ENSPTRG00000019727	CNOT4	97	88.321	ENSFHEG00000006608	cnot4a	100	73.141	Fundulus_heteroclitus
ENSPTRG00000019727	CNOT4	89	81.911	ENSGMOG00000001329	cnot4a	97	62.211	Gadus_morhua
ENSPTRG00000019727	CNOT4	100	95.231	ENSGALG00000011682	CNOT4	100	95.231	Gallus_gallus
ENSPTRG00000019727	CNOT4	97	82.270	ENSGACG00000004276	cnot4a	100	70.281	Gasterosteus_aculeatus
ENSPTRG00000019727	CNOT4	100	95.372	ENSGAGG00000017331	CNOT4	100	95.372	Gopherus_agassizii
ENSPTRG00000019727	CNOT4	96	95.665	ENSGGOG00000000142	CNOT4	100	99.733	Gorilla_gorilla
ENSPTRG00000019727	CNOT4	100	88.321	ENSHBUG00000000027	cnot4a	92	88.321	Haplochromis_burtoni
ENSPTRG00000019727	CNOT4	100	99.065	ENSHGLG00000011533	CNOT4	100	99.065	Heterocephalus_glaber_female
ENSPTRG00000019727	CNOT4	100	98.957	ENSHGLG00100013058	CNOT4	100	98.957	Heterocephalus_glaber_male
ENSPTRG00000019727	CNOT4	99	87.226	ENSHCOG00000015815	cnot4a	92	87.226	Hippocampus_comes
ENSPTRG00000019727	CNOT4	97	84.000	ENSIPUG00000006393	cnot4	100	71.429	Ictalurus_punctatus
ENSPTRG00000019727	CNOT4	91	88.356	ENSIPUG00000016994	cnot4b	100	70.519	Ictalurus_punctatus
ENSPTRG00000019727	CNOT4	100	98.442	ENSSTOG00000007717	CNOT4	100	98.442	Ictidomys_tridecemlineatus
ENSPTRG00000019727	CNOT4	100	98.287	ENSJJAG00000016618	Cnot4	100	98.287	Jaculus_jaculus
ENSPTRG00000019727	CNOT4	96	93.791	ENSJJAG00000019991	-	100	81.043	Jaculus_jaculus
ENSPTRG00000019727	CNOT4	97	89.299	ENSKMAG00000004581	cnot4a	100	72.796	Kryptolebias_marmoratus
ENSPTRG00000019727	CNOT4	86	88.686	ENSLBEG00000009999	cnot4a	100	66.131	Labrus_bergylta
ENSPTRG00000019727	CNOT4	100	83.694	ENSLACG00000002647	CNOT4	99	83.694	Latimeria_chalumnae
ENSPTRG00000019727	CNOT4	85	93.727	ENSLOCG00000016126	cnot4a	100	76.903	Lepisosteus_oculatus
ENSPTRG00000019727	CNOT4	100	97.756	ENSLAFG00000000709	CNOT4	100	97.756	Loxodonta_africana
ENSPTRG00000019727	CNOT4	100	100.000	ENSMFAG00000046349	CNOT4	100	100.000	Macaca_fascicularis
ENSPTRG00000019727	CNOT4	100	100.000	ENSMMUG00000016181	CNOT4	100	100.000	Macaca_mulatta
ENSPTRG00000019727	CNOT4	100	100.000	ENSMNEG00000042164	CNOT4	100	100.000	Macaca_nemestrina
ENSPTRG00000019727	CNOT4	100	100.000	ENSMLEG00000032709	CNOT4	100	100.000	Mandrillus_leucophaeus
ENSPTRG00000019727	CNOT4	99	89.299	ENSMAMG00000023194	cnot4a	92	89.299	Mastacembelus_armatus
ENSPTRG00000019727	CNOT4	100	88.321	ENSMZEG00005007312	cnot4a	92	88.321	Maylandia_zebra
ENSPTRG00000019727	CNOT4	100	88.451	ENSMGAG00000011788	CNOT4	100	88.451	Meleagris_gallopavo
ENSPTRG00000019727	CNOT4	100	99.130	ENSMAUG00000020415	Cnot4	100	99.130	Mesocricetus_auratus
ENSPTRG00000019727	CNOT4	100	99.533	ENSMICG00000001667	CNOT4	100	99.533	Microcebus_murinus
ENSPTRG00000019727	CNOT4	100	98.754	ENSMOCG00000020955	Cnot4	100	98.754	Microtus_ochrogaster
ENSPTRG00000019727	CNOT4	97	82.270	ENSMMOG00000014565	cnot4a	97	74.875	Mola_mola
ENSPTRG00000019727	CNOT4	100	96.353	ENSMODG00000014068	CNOT4	100	96.353	Monodelphis_domestica
ENSPTRG00000019727	CNOT4	97	89.299	ENSMALG00000011662	cnot4a	82	69.492	Monopterus_albus
ENSPTRG00000019727	CNOT4	100	98.440	MGP_CAROLIEiJ_G0028217	Cnot4	100	98.440	Mus_caroli
ENSPTRG00000019727	CNOT4	100	98.609	ENSMUSG00000038784	Cnot4	100	98.609	Mus_musculus
ENSPTRG00000019727	CNOT4	100	98.609	MGP_PahariEiJ_G0021974	Cnot4	100	98.609	Mus_pahari
ENSPTRG00000019727	CNOT4	100	98.261	MGP_SPRETEiJ_G0029216	Cnot4	100	98.261	Mus_spretus
ENSPTRG00000019727	CNOT4	100	98.597	ENSMPUG00000004089	CNOT4	100	98.597	Mustela_putorius_furo
ENSPTRG00000019727	CNOT4	100	99.065	ENSMLUG00000008260	CNOT4	100	99.065	Myotis_lucifugus
ENSPTRG00000019727	CNOT4	100	99.130	ENSNGAG00000015030	Cnot4	100	99.130	Nannospalax_galili
ENSPTRG00000019727	CNOT4	97	79.433	ENSNBRG00000021144	cnot4a	100	71.128	Neolamprologus_brichardi
ENSPTRG00000019727	CNOT4	100	99.533	ENSNLEG00000013352	CNOT4	100	99.533	Nomascus_leucogenys
ENSPTRG00000019727	CNOT4	97	80.290	ENSOPRG00000001023	CNOT4	90	80.290	Ochotona_princeps
ENSPTRG00000019727	CNOT4	100	98.287	ENSODEG00000012975	CNOT4	100	98.287	Octodon_degus
ENSPTRG00000019727	CNOT4	100	88.321	ENSONIG00000008656	cnot4a	92	88.321	Oreochromis_niloticus
ENSPTRG00000019727	CNOT4	100	95.245	ENSOANG00000005006	CNOT4	100	95.245	Ornithorhynchus_anatinus
ENSPTRG00000019727	CNOT4	100	98.738	ENSOCUG00000013448	CNOT4	100	98.738	Oryctolagus_cuniculus
ENSPTRG00000019727	CNOT4	97	83.688	ENSORLG00000003727	cnot4a	100	72.672	Oryzias_latipes
ENSPTRG00000019727	CNOT4	97	83.688	ENSORLG00020015684	cnot4a	100	72.247	Oryzias_latipes_hni
ENSPTRG00000019727	CNOT4	97	83.688	ENSORLG00015008470	cnot4a	100	72.672	Oryzias_latipes_hsok
ENSPTRG00000019727	CNOT4	97	83.688	ENSOMEG00000011084	cnot4a	100	71.908	Oryzias_melastigma
ENSPTRG00000019727	CNOT4	100	99.579	ENSOGAG00000015499	CNOT4	100	99.579	Otolemur_garnettii
ENSPTRG00000019727	CNOT4	100	98.597	ENSOARG00000008803	CNOT4	100	98.597	Ovis_aries
ENSPTRG00000019727	CNOT4	100	100.000	ENSPPAG00000041937	CNOT4	100	100.000	Pan_paniscus
ENSPTRG00000019727	CNOT4	100	99.377	ENSPPRG00000023940	CNOT4	100	99.377	Panthera_pardus
ENSPTRG00000019727	CNOT4	100	98.609	ENSPTIG00000016601	CNOT4	100	98.609	Panthera_tigris_altaica
ENSPTRG00000019727	CNOT4	100	100.000	ENSPANG00000017724	CNOT4	100	100.000	Papio_anubis
ENSPTRG00000019727	CNOT4	97	82.033	ENSPKIG00000018137	cnot4a	100	71.517	Paramormyrops_kingsleyae
ENSPTRG00000019727	CNOT4	100	87.811	ENSPSIG00000011256	CNOT4	100	87.811	Pelodiscus_sinensis
ENSPTRG00000019727	CNOT4	97	81.797	ENSPMGG00000005671	cnot4a	100	72.741	Periophthalmus_magnuspinnatus
ENSPTRG00000019727	CNOT4	100	98.754	ENSPEMG00000021566	Cnot4	100	98.754	Peromyscus_maniculatus_bairdii
ENSPTRG00000019727	CNOT4	100	96.262	ENSPCIG00000029622	CNOT4	96	96.073	Phascolarctos_cinereus
ENSPTRG00000019727	CNOT4	91	85.172	ENSPFOG00000002228	cnot4a	100	59.535	Poecilia_formosa
ENSPTRG00000019727	CNOT4	97	82.742	ENSPLAG00000001780	cnot4a	100	72.879	Poecilia_latipinna
ENSPTRG00000019727	CNOT4	97	82.742	ENSPMEG00000006852	cnot4a	100	72.576	Poecilia_mexicana
ENSPTRG00000019727	CNOT4	97	82.270	ENSPREG00000008171	cnot4a	100	70.683	Poecilia_reticulata
ENSPTRG00000019727	CNOT4	100	98.878	ENSPPYG00000018026	CNOT4	100	98.878	Pongo_abelii
ENSPTRG00000019727	CNOT4	100	99.377	ENSPCOG00000019907	CNOT4	100	99.377	Propithecus_coquereli
ENSPTRG00000019727	CNOT4	97	99.048	ENSPVAG00000004905	CNOT4	90	96.957	Pteropus_vampyrus
ENSPTRG00000019727	CNOT4	100	88.321	ENSPNYG00000004276	cnot4a	92	88.321	Pundamilia_nyererei
ENSPTRG00000019727	CNOT4	97	86.052	ENSPNAG00000008679	cnot4b	100	74.701	Pygocentrus_nattereri
ENSPTRG00000019727	CNOT4	99	91.513	ENSPNAG00000020433	cnot4a	100	71.565	Pygocentrus_nattereri
ENSPTRG00000019727	CNOT4	100	97.195	ENSRNOG00000010795	Cnot4	100	97.195	Rattus_norvegicus
ENSPTRG00000019727	CNOT4	100	100.000	ENSRBIG00000043977	CNOT4	100	100.000	Rhinopithecus_bieti
ENSPTRG00000019727	CNOT4	100	99.375	ENSSBOG00000020808	CNOT4	100	99.375	Saimiri_boliviensis_boliviensis
ENSPTRG00000019727	CNOT4	100	96.213	ENSSHAG00000013639	CNOT4	100	96.213	Sarcophilus_harrisii
ENSPTRG00000019727	CNOT4	99	90.406	ENSSFOG00015002019	cnot4a	100	73.065	Scleropages_formosus
ENSPTRG00000019727	CNOT4	99	92.251	ENSSFOG00015017285	CNOT4	91	92.251	Scleropages_formosus
ENSPTRG00000019727	CNOT4	97	89.299	ENSSMAG00000008614	cnot4a	100	72.030	Scophthalmus_maximus
ENSPTRG00000019727	CNOT4	99	89.299	ENSSDUG00000022635	cnot4a	92	89.299	Seriola_dumerili
ENSPTRG00000019727	CNOT4	96	85.621	ENSSDUG00000018585	cnot4b	100	70.968	Seriola_dumerili
ENSPTRG00000019727	CNOT4	100	62.745	ENSSLDG00000014347	cnot4b	100	57.268	Seriola_lalandi_dorsalis
ENSPTRG00000019727	CNOT4	99	89.299	ENSSLDG00000015770	cnot4a	92	89.299	Seriola_lalandi_dorsalis
ENSPTRG00000019727	CNOT4	100	95.639	ENSSPUG00000004677	CNOT4	100	95.639	Sphenodon_punctatus
ENSPTRG00000019727	CNOT4	99	89.299	ENSSPAG00000012329	cnot4a	92	89.299	Stegastes_partitus
ENSPTRG00000019727	CNOT4	100	99.221	ENSSSCG00000021354	CNOT4	100	99.221	Sus_scrofa
ENSPTRG00000019727	CNOT4	100	89.108	ENSTGUG00000009161	CNOT4	100	89.108	Taeniopygia_guttata
ENSPTRG00000019727	CNOT4	100	82.508	ENSTRUG00000016861	cnot4a	100	71.880	Takifugu_rubripes
ENSPTRG00000019727	CNOT4	97	79.433	ENSTNIG00000016000	cnot4a	100	69.783	Tetraodon_nigroviridis
ENSPTRG00000019727	CNOT4	96	97.712	ENSTBEG00000002202	CNOT4	86	93.750	Tupaia_belangeri
ENSPTRG00000019727	CNOT4	97	99.048	ENSTTRG00000005122	CNOT4	90	98.263	Tursiops_truncatus
ENSPTRG00000019727	CNOT4	100	99.377	ENSUAMG00000026759	CNOT4	100	99.377	Ursus_americanus
ENSPTRG00000019727	CNOT4	100	99.304	ENSUMAG00000015351	CNOT4	100	99.304	Ursus_maritimus
ENSPTRG00000019727	CNOT4	100	99.304	ENSVVUG00000006200	CNOT4	100	99.304	Vulpes_vulpes
ENSPTRG00000019727	CNOT4	100	98.182	ENSXETG00000010594	cnot4	90	98.182	Xenopus_tropicalis
ENSPTRG00000019727	CNOT4	93	84.564	ENSXCOG00000020824	cnot4a	98	71.037	Xiphophorus_couchianus
ENSPTRG00000019727	CNOT4	97	82.742	ENSXMAG00000016984	cnot4a	100	70.981	Xiphophorus_maculatus