EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPTRG00000020420 (Gene tree)
Gene ID: -
Gene Symbol: RBM12B
Alias: -
Full Name: RNA binding motif protein 12B
Gene Type: protein_coding
Species: Pan_troglodytes
Status: putative
Strand: Minus strand
Length: 12323 bases
Position: chr8:95346935-95359257
Accession: 809
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTRP00000086215	RRM_1	PF00076.22	3e-27	1	2
ENSPTRP00000086215	RRM_1	PF00076.22	3e-27	2	2
ENSPTRP00000055412	RRM_1	PF00076.22	1.1e-20	1	2
ENSPTRP00000055412	RRM_1	PF00076.22	1.1e-20	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTRT00000063868	-	2816	-	ENSPTRP00000055412	876 (aa)	-	H2RBB0
ENSPTRT00000085897	-	2646	XM_003311838	ENSPTRP00000086215	881 (aa)	XP_003311886	A0A2I3TAC6

Gene Model

Click here to download ENSPTRG00000020420's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000020420's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPTRG00000020420	RBM12B	53	36.145	ENSPTRG00000051626	-	82	36.145
ENSPTRG00000020420	RBM12B	57	72.414	ENSPTRG00000013446	RBM12	54	72.414
ENSPTRG00000020420	RBM12B	57	72.414	ENSPTRG00000040708	-	54	72.414

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTRG00000020420	RBM12B	100	98.865	ENSG00000183808	RBM12B	100	100.000	Homo_sapiens
ENSPTRG00000020420	RBM12B	71	38.596	ENSAPOG00000013963	rbm12b	95	38.596	Acanthochromis_polyacanthus
ENSPTRG00000020420	RBM12B	100	83.087	ENSAMEG00000007134	RBM12B	100	85.131	Ailuropoda_melanoleuca
ENSPTRG00000020420	RBM12B	61	40.127	ENSACIG00000014943	rbm12b	99	40.127	Amphilophus_citrinellus
ENSPTRG00000020420	RBM12B	71	39.208	ENSAOCG00000024270	rbm12b	100	38.298	Amphiprion_ocellaris
ENSPTRG00000020420	RBM12B	69	43.515	ENSAPEG00000022079	rbm12b	96	43.515	Amphiprion_percula
ENSPTRG00000020420	RBM12B	64	45.455	ENSATEG00000004578	rbm12b	85	45.455	Anabas_testudineus
ENSPTRG00000020420	RBM12B	55	47.500	ENSATEG00000001886	zgc:153215	76	47.500	Anabas_testudineus
ENSPTRG00000020420	RBM12B	81	61.333	ENSAPLG00000002020	RBM12B	100	61.333	Anas_platyrhynchos
ENSPTRG00000020420	RBM12B	100	42.479	ENSACAG00000003463	RBM12B	100	39.028	Anolis_carolinensis
ENSPTRG00000020420	RBM12B	99	92.281	ENSANAG00000034015	RBM12B	100	92.622	Aotus_nancymaae
ENSPTRG00000020420	RBM12B	68	46.753	ENSACLG00000005575	rbm12b	90	46.753	Astatotilapia_calliptera
ENSPTRG00000020420	RBM12B	65	46.753	ENSACLG00000005578	rbm12b	87	46.753	Astatotilapia_calliptera
ENSPTRG00000020420	RBM12B	68	42.857	ENSAMXG00000041973	rbm12b	91	42.857	Astyanax_mexicanus
ENSPTRG00000020420	RBM12B	100	86.168	ENSBTAG00000013408	RBM12B	100	86.168	Bos_taurus
ENSPTRG00000020420	RBM12B	99	85.369	ENSCAFG00000009109	RBM12B	100	73.447	Canis_familiaris
ENSPTRG00000020420	RBM12B	100	88.082	ENSCAFG00020012203	RBM12B	100	88.082	Canis_lupus_dingo
ENSPTRG00000020420	RBM12B	100	83.486	ENSCHIG00000006790	RBM12B	89	85.469	Capra_hircus
ENSPTRG00000020420	RBM12B	99	85.633	ENSTSYG00000012515	RBM12B	100	77.056	Carlito_syrichta
ENSPTRG00000020420	RBM12B	100	81.303	ENSCAPG00000003543	RBM12B	100	76.261	Cavia_aperea
ENSPTRG00000020420	RBM12B	100	81.303	ENSCPOG00000007815	RBM12B	100	76.261	Cavia_porcellus
ENSPTRG00000020420	RBM12B	100	94.331	ENSCATG00000030769	RBM12B	100	94.564	Cercocebus_atys
ENSPTRG00000020420	RBM12B	100	81.828	ENSCLAG00000017617	RBM12B	100	77.101	Chinchilla_lanigera
ENSPTRG00000020420	RBM12B	99	98.848	ENSCSAG00000018559	RBM12B	87	98.848	Chlorocebus_sabaeus
ENSPTRG00000020420	RBM12B	98	80.274	ENSCHOG00000008934	RBM12B	100	76.055	Choloepus_hoffmanni
ENSPTRG00000020420	RBM12B	81	62.238	ENSCPBG00000003061	RBM12B	100	62.238	Chrysemys_picta_bellii
ENSPTRG00000020420	RBM12B	100	94.344	ENSCANG00000030379	RBM12B	100	94.344	Colobus_angolensis_palliatus
ENSPTRG00000020420	RBM12B	100	76.190	ENSCGRG00001008710	-	97	76.190	Cricetulus_griseus_chok1gshd
ENSPTRG00000020420	RBM12B	73	39.761	ENSCSEG00000004610	rbm12b	89	39.761	Cynoglossus_semilaevis
ENSPTRG00000020420	RBM12B	55	33.929	ENSCVAG00000009259	-	99	33.929	Cyprinodon_variegatus
ENSPTRG00000020420	RBM12B	64	46.753	ENSCVAG00000011047	rbm12b	86	46.753	Cyprinodon_variegatus
ENSPTRG00000020420	RBM12B	55	30.459	ENSDARG00000055889	zgc:153215	99	30.037	Danio_rerio
ENSPTRG00000020420	RBM12B	66	41.558	ENSDARG00000079717	rbm12b	82	41.558	Danio_rerio
ENSPTRG00000020420	RBM12B	99	83.484	ENSDNOG00000041608	RBM12B	100	81.429	Dasypus_novemcinctus
ENSPTRG00000020420	RBM12B	100	80.021	ENSDORG00000024034	-	100	79.915	Dipodomys_ordii
ENSPTRG00000020420	RBM12B	84	73.941	ENSETEG00000013005	-	84	73.041	Echinops_telfairi
ENSPTRG00000020420	RBM12B	51	30.531	ENSEBUG00000009015	-	71	30.531	Eptatretus_burgeri
ENSPTRG00000020420	RBM12B	100	87.982	ENSEASG00005016297	RBM12B	100	87.982	Equus_asinus_asinus
ENSPTRG00000020420	RBM12B	99	84.677	ENSECAG00000017870	RBM12B	100	81.443	Equus_caballus
ENSPTRG00000020420	RBM12B	100	87.968	ENSFCAG00000029274	RBM12B	100	87.968	Felis_catus
ENSPTRG00000020420	RBM12B	81	61.871	ENSFALG00000014893	RBM12B	100	61.871	Ficedula_albicollis
ENSPTRG00000020420	RBM12B	100	81.164	ENSFDAG00000005576	RBM12B	97	77.249	Fukomys_damarensis
ENSPTRG00000020420	RBM12B	54	30.544	ENSFHEG00000014539	zgc:153215	96	30.544	Fundulus_heteroclitus
ENSPTRG00000020420	RBM12B	64	48.052	ENSFHEG00000016425	rbm12b	86	48.052	Fundulus_heteroclitus
ENSPTRG00000020420	RBM12B	65	45.333	ENSGMOG00000013467	rbm12b	90	45.333	Gadus_morhua
ENSPTRG00000020420	RBM12B	82	60.000	ENSGALG00000035129	RBM12B	100	60.000	Gallus_gallus
ENSPTRG00000020420	RBM12B	64	48.052	ENSGAFG00000007224	rbm12b	86	48.052	Gambusia_affinis
ENSPTRG00000020420	RBM12B	64	44.156	ENSGACG00000008682	rbm12b	85	44.156	Gasterosteus_aculeatus
ENSPTRG00000020420	RBM12B	82	61.379	ENSGAGG00000009774	RBM12B	100	61.379	Gopherus_agassizii
ENSPTRG00000020420	RBM12B	100	95.923	ENSGGOG00000011909	RBM12B	100	95.923	Gorilla_gorilla
ENSPTRG00000020420	RBM12B	64	46.753	ENSHBUG00000016227	rbm12b	84	46.753	Haplochromis_burtoni
ENSPTRG00000020420	RBM12B	100	80.957	ENSHGLG00000009063	RBM12B	100	76.330	Heterocephalus_glaber_female
ENSPTRG00000020420	RBM12B	100	80.957	ENSHGLG00100021324	RBM12B	100	76.330	Heterocephalus_glaber_male
ENSPTRG00000020420	RBM12B	64	49.351	ENSHCOG00000014952	rbm12b	100	49.351	Hippocampus_comes
ENSPTRG00000020420	RBM12B	55	30.755	ENSIPUG00000019731	zgc:153215	99	30.755	Ictalurus_punctatus
ENSPTRG00000020420	RBM12B	67	46.067	ENSIPUG00000001167	RBM12B	87	46.067	Ictalurus_punctatus
ENSPTRG00000020420	RBM12B	100	83.428	ENSSTOG00000027445	RBM12B	100	85.358	Ictidomys_tridecemlineatus
ENSPTRG00000020420	RBM12B	100	79.910	ENSJJAG00000004165	-	100	79.910	Jaculus_jaculus
ENSPTRG00000020420	RBM12B	64	47.368	ENSKMAG00000013715	rbm12b	86	47.368	Kryptolebias_marmoratus
ENSPTRG00000020420	RBM12B	55	30.584	ENSKMAG00000004958	zgc:153215	99	30.584	Kryptolebias_marmoratus
ENSPTRG00000020420	RBM12B	64	47.368	ENSKMAG00000013704	rbm12b	83	47.368	Kryptolebias_marmoratus
ENSPTRG00000020420	RBM12B	55	30.845	ENSLBEG00000002597	zgc:153215	99	30.485	Labrus_bergylta
ENSPTRG00000020420	RBM12B	74	50.735	ENSLACG00000007177	RBM12B	100	50.735	Latimeria_chalumnae
ENSPTRG00000020420	RBM12B	64	50.649	ENSLOCG00000018344	rbm12b	86	50.649	Lepisosteus_oculatus
ENSPTRG00000020420	RBM12B	100	77.664	ENSLAFG00000029949	RBM12B	100	79.138	Loxodonta_africana
ENSPTRG00000020420	RBM12B	100	94.796	ENSMFAG00000045430	RBM12B	100	94.796	Macaca_fascicularis
ENSPTRG00000020420	RBM12B	100	98.524	ENSMMUG00000005558	RBM12B	100	98.524	Macaca_mulatta
ENSPTRG00000020420	RBM12B	100	94.796	ENSMNEG00000041292	RBM12B	100	94.796	Macaca_nemestrina
ENSPTRG00000020420	RBM12B	100	95.692	ENSMLEG00000037288	RBM12B	100	95.692	Mandrillus_leucophaeus
ENSPTRG00000020420	RBM12B	74	43.168	ENSMAMG00000011998	rbm12b	100	43.168	Mastacembelus_armatus
ENSPTRG00000020420	RBM12B	68	46.753	ENSMZEG00005014845	rbm12b	91	45.946	Maylandia_zebra
ENSPTRG00000020420	RBM12B	68	46.753	ENSMZEG00005015005	rbm12b	92	46.753	Maylandia_zebra
ENSPTRG00000020420	RBM12B	55	58.594	ENSMGAG00000011985	RBM12B	99	58.594	Meleagris_gallopavo
ENSPTRG00000020420	RBM12B	100	76.417	ENSMAUG00000021752	-	100	76.417	Mesocricetus_auratus
ENSPTRG00000020420	RBM12B	100	84.677	ENSMICG00000036969	RBM12B	100	87.401	Microcebus_murinus
ENSPTRG00000020420	RBM12B	99	73.721	ENSMOCG00000005603	-	100	74.405	Microtus_ochrogaster
ENSPTRG00000020420	RBM12B	63	47.368	ENSMMOG00000002404	rbm12b	94	47.368	Mola_mola
ENSPTRG00000020420	RBM12B	97	67.299	ENSMODG00000007436	RBM12B	98	59.778	Monodelphis_domestica
ENSPTRG00000020420	RBM12B	66	50.000	ENSMALG00000012059	rbm12b	88	50.000	Monopterus_albus
ENSPTRG00000020420	RBM12B	55	30.061	ENSMALG00000001222	zgc:153215	98	30.061	Monopterus_albus
ENSPTRG00000020420	RBM12B	99	72.614	ENSMUSG00000046667	Rbm12b1	100	71.041	Mus_musculus
ENSPTRG00000020420	RBM12B	99	72.476	ENSMUSG00000052137	Rbm12b2	100	71.267	Mus_musculus
ENSPTRG00000020420	RBM12B	100	70.734	MGP_SPRETEiJ_G0026765	-	100	70.550	Mus_spretus
ENSPTRG00000020420	RBM12B	100	71.606	MGP_SPRETEiJ_G0026766	-	100	71.833	Mus_spretus
ENSPTRG00000020420	RBM12B	99	84.817	ENSMPUG00000018637	RBM12B	90	84.817	Mustela_putorius_furo
ENSPTRG00000020420	RBM12B	100	75.866	ENSMLUG00000002359	RBM12B	100	74.895	Myotis_lucifugus
ENSPTRG00000020420	RBM12B	100	81.250	ENSNGAG00000002801	-	100	80.280	Nannospalax_galili
ENSPTRG00000020420	RBM12B	68	46.753	ENSNBRG00000015057	rbm12b	92	46.753	Neolamprologus_brichardi
ENSPTRG00000020420	RBM12B	100	96.606	ENSNLEG00000032050	RBM12B	100	96.606	Nomascus_leucogenys
ENSPTRG00000020420	RBM12B	100	80.252	ENSODEG00000019204	RBM12B	100	75.499	Octodon_degus
ENSPTRG00000020420	RBM12B	68	46.753	ENSONIG00000020612	rbm12b	92	46.753	Oreochromis_niloticus
ENSPTRG00000020420	RBM12B	82	67.333	ENSOANG00000015735	-	97	67.333	Ornithorhynchus_anatinus
ENSPTRG00000020420	RBM12B	100	85.471	ENSOCUG00000010353	RBM12B	100	85.471	Oryctolagus_cuniculus
ENSPTRG00000020420	RBM12B	64	48.052	ENSORLG00000008228	rbm12b	83	48.052	Oryzias_latipes
ENSPTRG00000020420	RBM12B	64	48.052	ENSORLG00020013619	rbm12b	83	48.052	Oryzias_latipes_hni
ENSPTRG00000020420	RBM12B	64	48.052	ENSORLG00015019999	rbm12b	83	48.052	Oryzias_latipes_hsok
ENSPTRG00000020420	RBM12B	64	49.351	ENSOMEG00000022523	rbm12b	83	49.351	Oryzias_melastigma
ENSPTRG00000020420	RBM12B	99	87.442	ENSOGAG00000002979	RBM12B	88	87.442	Otolemur_garnettii
ENSPTRG00000020420	RBM12B	100	87.741	ENSPTIG00000020071	RBM12B	100	87.741	Panthera_tigris_altaica
ENSPTRG00000020420	RBM12B	100	95.918	ENSPANG00000035535	RBM12B	100	95.918	Papio_anubis
ENSPTRG00000020420	RBM12B	55	32.432	ENSPKIG00000014851	zgc:153215	99	32.432	Paramormyrops_kingsleyae
ENSPTRG00000020420	RBM12B	64	48.052	ENSPKIG00000018719	rbm12b	85	48.052	Paramormyrops_kingsleyae
ENSPTRG00000020420	RBM12B	82	60.544	ENSPSIG00000001348	RBM12B	100	60.544	Pelodiscus_sinensis
ENSPTRG00000020420	RBM12B	50	37.500	ENSPMGG00000012348	-	97	37.500	Periophthalmus_magnuspinnatus
ENSPTRG00000020420	RBM12B	100	76.871	ENSPEMG00000008279	-	100	77.778	Peromyscus_maniculatus_bairdii
ENSPTRG00000020420	RBM12B	95	66.455	ENSPCIG00000008556	RBM12B	100	59.222	Phascolarctos_cinereus
ENSPTRG00000020420	RBM12B	68	41.667	ENSPFOG00000020937	rbm12b	89	41.667	Poecilia_formosa
ENSPTRG00000020420	RBM12B	68	41.667	ENSPLAG00000018782	rbm12b	92	41.667	Poecilia_latipinna
ENSPTRG00000020420	RBM12B	67	41.379	ENSPMEG00000011418	rbm12b	92	41.379	Poecilia_mexicana
ENSPTRG00000020420	RBM12B	68	41.667	ENSPREG00000020770	rbm12b	92	41.667	Poecilia_reticulata
ENSPTRG00000020420	RBM12B	55	30.814	ENSPREG00000018608	zgc:153215	99	30.814	Poecilia_reticulata
ENSPTRG00000020420	RBM12B	99	98.387	ENSPPYG00000018745	RBM12B	87	98.387	Pongo_abelii
ENSPTRG00000020420	RBM12B	100	90.238	ENSPCOG00000023546	RBM12B	100	90.238	Propithecus_coquereli
ENSPTRG00000020420	RBM12B	100	81.701	ENSPVAG00000011803	RBM12B	100	81.163	Pteropus_vampyrus
ENSPTRG00000020420	RBM12B	68	46.753	ENSPNYG00000016696	rbm12b	92	46.753	Pundamilia_nyererei
ENSPTRG00000020420	RBM12B	55	31.485	ENSPNAG00000025628	zgc:153215	99	31.485	Pygocentrus_nattereri
ENSPTRG00000020420	RBM12B	64	49.351	ENSPNAG00000008126	rbm12b	84	49.351	Pygocentrus_nattereri
ENSPTRG00000020420	RBM12B	100	71.251	ENSRNOG00000016330	Rbm12b	100	71.445	Rattus_norvegicus
ENSPTRG00000020420	RBM12B	99	71.117	ENSRNOG00000055292	LOC679087	100	71.483	Rattus_norvegicus
ENSPTRG00000020420	RBM12B	100	97.049	ENSRBIG00000035046	RBM12B	100	97.049	Rhinopithecus_bieti
ENSPTRG00000020420	RBM12B	100	91.959	ENSRROG00000023660	RBM12B	100	92.752	Rhinopithecus_roxellana
ENSPTRG00000020420	RBM12B	100	92.881	ENSSBOG00000027592	RBM12B	100	94.564	Saimiri_boliviensis_boliviensis
ENSPTRG00000020420	RBM12B	92	67.299	ENSSHAG00000015335	RBM12B	100	59.444	Sarcophilus_harrisii
ENSPTRG00000020420	RBM12B	64	46.753	ENSSFOG00015001584	rbm12b	86	46.753	Scleropages_formosus
ENSPTRG00000020420	RBM12B	55	35.029	ENSSFOG00015009427	zgc:153215	99	35.029	Scleropages_formosus
ENSPTRG00000020420	RBM12B	64	48.052	ENSSMAG00000019708	rbm12b	86	48.052	Scophthalmus_maximus
ENSPTRG00000020420	RBM12B	70	41.980	ENSSDUG00000006856	rbm12b	95	41.980	Seriola_dumerili
ENSPTRG00000020420	RBM12B	64	48.052	ENSSLDG00000016156	rbm12b	86	48.052	Seriola_lalandi_dorsalis
ENSPTRG00000020420	RBM12B	97	78.947	ENSSARG00000011845	-	84	79.806	Sorex_araneus
ENSPTRG00000020420	RBM12B	56	56.455	ENSSPUG00000016954	RBM12B	91	56.455	Sphenodon_punctatus
ENSPTRG00000020420	RBM12B	66	48.052	ENSSPAG00000006774	rbm12b	90	48.052	Stegastes_partitus
ENSPTRG00000020420	RBM12B	99	84.988	ENSSSCG00000006110	RBM12B	99	84.988	Sus_scrofa
ENSPTRG00000020420	RBM12B	58	56.031	ENSTGUG00000011860	RBM12B	100	56.031	Taeniopygia_guttata
ENSPTRG00000020420	RBM12B	64	48.052	ENSTRUG00000013738	rbm12b	86	48.052	Takifugu_rubripes
ENSPTRG00000020420	RBM12B	99	86.321	ENSTBEG00000000449	RBM12B	82	86.321	Tupaia_belangeri
ENSPTRG00000020420	RBM12B	100	88.562	ENSUAMG00000023639	RBM12B	100	88.562	Ursus_americanus
ENSPTRG00000020420	RBM12B	100	83.623	ENSUMAG00000016008	RBM12B	100	80.194	Ursus_maritimus
ENSPTRG00000020420	RBM12B	88	93.814	ENSVPAG00000001080	RBM12B	90	93.814	Vicugna_pacos
ENSPTRG00000020420	RBM12B	100	88.422	ENSVVUG00000002694	RBM12B	100	88.422	Vulpes_vulpes
ENSPTRG00000020420	RBM12B	69	42.466	ENSXETG00000014696	rbm12b	88	39.080	Xenopus_tropicalis
ENSPTRG00000020420	RBM12B	86	43.384	ENSXETG00000014694	rbm12b	100	46.748	Xenopus_tropicalis
ENSPTRG00000020420	RBM12B	56	30.247	ENSXETG00000025920	-	97	30.247	Xenopus_tropicalis
ENSPTRG00000020420	RBM12B	52	39.252	ENSXCOG00000019735	-	99	40.308	Xiphophorus_couchianus
ENSPTRG00000020420	RBM12B	68	41.667	ENSXMAG00000014213	rbm12b	92	41.667	Xiphophorus_maculatus