EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSPTRG00000020670 (Gene tree)
Gene ID
-
Gene Symbol
PUF60
Alias
-
Full Name
poly(U) binding splicing factor 60
Gene Type
protein_coding
Species
Pan_troglodytes
Status
putative
Strand
Minus strand
Length
13523 bases
Position
chr8:146597021-146610543
Accession
13238
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPTRP00000086866RRM_1PF00076.223.3e-4312
ENSPTRP00000086866RRM_1PF00076.223.3e-4322
ENSPTRP00000035347RRM_1PF00076.223.5e-4312
ENSPTRP00000035347RRM_1PF00076.223.5e-4322
ENSPTRP00000061888RRM_1PF00076.223.5e-4312
ENSPTRP00000061888RRM_1PF00076.223.5e-4322
ENSPTRP00000070048RRM_1PF00076.223.7e-4312
ENSPTRP00000070048RRM_1PF00076.223.7e-4322
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPTRT00000103916-1596-ENSPTRP00000061888531 (aa)-A0A2I3RB95
ENSPTRT00000106612-2379XM_016960047ENSPTRP00000070048559 (aa)XP_016815539A0A2I3S0E4
ENSPTRT00000096147-2328XM_016960048ENSPTRP00000086866542 (aa)XP_016815542A0A2I3TDC0
ENSPTRT00000038232-1839XM_016960055ENSPTRP00000035347530 (aa)XP_016815544H2QWV1
Gene Model
Click here to download ENSPTRG00000020670's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000020670's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSPTRG00000020670PUF605136.000ENSPTRG00000011523U2AF28337.255
ENSPTRG00000020670PUF6099100.000ENSPTRG00000043963-99100.000
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPTRG00000020670PUF6010099.821ENSG00000179950PUF6010099.821Homo_sapiens
ENSPTRG00000020670PUF609984.615ENSAPOG00000001713puf60b9985.417Acanthochromis_polyacanthus
ENSPTRG00000020670PUF609996.774ENSAMEG00000006406PUF609996.774Ailuropoda_melanoleuca
ENSPTRG00000020670PUF609777.159ENSACIG00000003263-9977.586Amphilophus_citrinellus
ENSPTRG00000020670PUF609785.413ENSACIG00000021705puf60b10085.413Amphilophus_citrinellus
ENSPTRG00000020670PUF609984.615ENSAOCG00000005395puf60b10086.180Amphiprion_ocellaris
ENSPTRG00000020670PUF6010080.712ENSAOCG00000015558-10081.273Amphiprion_ocellaris
ENSPTRG00000020670PUF609879.886ENSAPEG00000011923puf60b9982.583Amphiprion_percula
ENSPTRG00000020670PUF609772.553ENSAPEG00000001836-9976.471Amphiprion_percula
ENSPTRG00000020670PUF609984.615ENSATEG00000001730puf60b9985.227Anabas_testudineus
ENSPTRG00000020670PUF609980.414ENSATEG00000006303-9981.333Anabas_testudineus
ENSPTRG00000020670PUF609897.893ENSAPLG00000010150PUF6010097.893Anas_platyrhynchos
ENSPTRG00000020670PUF609996.388ENSACAG00000001645PUF609896.212Anolis_carolinensis
ENSPTRG00000020670PUF6010099.434ENSANAG00000018626PUF6010099.434Aotus_nancymaae
ENSPTRG00000020670PUF609785.413ENSACLG00000004462puf60b10085.413Astatotilapia_calliptera
ENSPTRG00000020670PUF609776.636ENSAMXG00000041030puf60b10076.923Astyanax_mexicanus
ENSPTRG00000020670PUF609884.299ENSAMXG00000036570puf60a9784.932Astyanax_mexicanus
ENSPTRG00000020670PUF6010099.057ENSBTAG00000037493PUF6010099.057Bos_taurus
ENSPTRG00000020670PUF608050.162WBGene00004389rnp-68353.497Caenorhabditis_elegans
ENSPTRG00000020670PUF6010099.623ENSCJAG00000021485PUF6010099.623Callithrix_jacchus
ENSPTRG00000020670PUF6010099.263ENSCAFG00000001400PUF6010099.263Canis_familiaris
ENSPTRG00000020670PUF6010099.434ENSCAFG00020018754PUF6010099.434Canis_lupus_dingo
ENSPTRG00000020670PUF609998.911ENSCHIG00000001618PUF609298.911Capra_hircus
ENSPTRG00000020670PUF6010099.245ENSTSYG00000011912PUF6010099.419Carlito_syrichta
ENSPTRG00000020670PUF609992.665ENSCPOG00000014613PUF609992.844Cavia_porcellus
ENSPTRG00000020670PUF6010099.434ENSCCAG00000007744PUF6010099.434Cebus_capucinus
ENSPTRG00000020670PUF6010099.821ENSCATG00000035405PUF6010099.821Cercocebus_atys
ENSPTRG00000020670PUF6010098.404ENSCLAG00000009154PUF6010098.404Chinchilla_lanigera
ENSPTRG00000020670PUF609799.806ENSCSAG00000008878PUF6010099.806Chlorocebus_sabaeus
ENSPTRG00000020670PUF609997.538ENSCPBG00000005595PUF609997.538Chrysemys_picta_bellii
ENSPTRG00000020670PUF606259.882ENSCING00000002156-8763.043Ciona_intestinalis
ENSPTRG00000020670PUF6010048.175ENSCING00000008436-9948.603Ciona_intestinalis
ENSPTRG00000020670PUF609555.364ENSCSAVG00000001385-9955.000Ciona_savignyi
ENSPTRG00000020670PUF609548.911ENSCSAVG00000004765-9750.206Ciona_savignyi
ENSPTRG00000020670PUF608099.770ENSCANG00000041843PUF6010099.770Colobus_angolensis_palliatus
ENSPTRG00000020670PUF6010097.695ENSCGRG00001017442Puf6010097.695Cricetulus_griseus_chok1gshd
ENSPTRG00000020670PUF609898.467ENSCGRG00000003717Puf609997.122Cricetulus_griseus_crigri
ENSPTRG00000020670PUF609971.269ENSCSEG00000014845-8977.273Cynoglossus_semilaevis
ENSPTRG00000020670PUF609884.630ENSCSEG00000019887puf60b9384.440Cynoglossus_semilaevis
ENSPTRG00000020670PUF608979.789ENSCVAG00000001560-9879.536Cyprinodon_variegatus
ENSPTRG00000020670PUF609784.645ENSCVAG00000009386puf60b10085.797Cyprinodon_variegatus
ENSPTRG00000020670PUF609778.571ENSDARG00000001241puf60b9996.032Danio_rerio
ENSPTRG00000020670PUF609787.146ENSDARG00000032175puf60a9994.043Danio_rerio
ENSPTRG00000020670PUF609981.441ENSDNOG00000043278PUF609881.441Dasypus_novemcinctus
ENSPTRG00000020670PUF609999.093ENSDORG00000004585Puf6010099.093Dipodomys_ordii
ENSPTRG00000020670PUF609548.969FBgn0028577hfp9947.890Drosophila_melanogaster
ENSPTRG00000020670PUF609860.672ENSEBUG00000014291puf60b8565.739Eptatretus_burgeri
ENSPTRG00000020670PUF609569.841ENSEBUG00000005470-8872.016Eptatretus_burgeri
ENSPTRG00000020670PUF6010099.434ENSEASG00005009695PUF6010099.434Equus_asinus_asinus
ENSPTRG00000020670PUF609999.096ENSECAG00000024681PUF609999.096Equus_caballus
ENSPTRG00000020670PUF6010084.387ENSELUG00000018443-9985.602Esox_lucius
ENSPTRG00000020670PUF609982.397ENSELUG00000006507puf60b10079.286Esox_lucius
ENSPTRG00000020670PUF6010099.057ENSFCAG00000001045PUF6010099.057Felis_catus
ENSPTRG00000020670PUF609985.305ENSFALG00000001136PUF609986.476Ficedula_albicollis
ENSPTRG00000020670PUF6010098.050ENSFDAG00000017177PUF6010098.050Fukomys_damarensis
ENSPTRG00000020670PUF6010083.364ENSFHEG00000020046puf60b10085.988Fundulus_heteroclitus
ENSPTRG00000020670PUF609379.116ENSFHEG00000021687PUF6010079.959Fundulus_heteroclitus
ENSPTRG00000020670PUF609871.429ENSGMOG00000006392puf60b10070.677Gadus_morhua
ENSPTRG00000020670PUF606597.674ENSGALG00000039901PUF609497.674Gallus_gallus
ENSPTRG00000020670PUF6010082.617ENSGAFG00000021040puf60b10085.413Gambusia_affinis
ENSPTRG00000020670PUF609779.344ENSGAFG00000004334-9978.842Gambusia_affinis
ENSPTRG00000020670PUF609969.450ENSGACG00000001484-10069.231Gasterosteus_aculeatus
ENSPTRG00000020670PUF6010073.184ENSGACG00000004717puf60b10072.523Gasterosteus_aculeatus
ENSPTRG00000020670PUF609997.538ENSGAGG00000013289PUF609397.538Gopherus_agassizii
ENSPTRG00000020670PUF6010099.821ENSGGOG00000004646PUF6010099.821Gorilla_gorilla
ENSPTRG00000020670PUF609884.630ENSHBUG00000015118puf60b10085.413Haplochromis_burtoni
ENSPTRG00000020670PUF609981.051ENSHBUG00000009634-10082.540Haplochromis_burtoni
ENSPTRG00000020670PUF6010098.050ENSHGLG00000006111PUF6010098.050Heterocephalus_glaber_female
ENSPTRG00000020670PUF6010098.050ENSHGLG00100012362PUF6010098.050Heterocephalus_glaber_male
ENSPTRG00000020670PUF609666.601ENSHCOG00000000378-9964.850Hippocampus_comes
ENSPTRG00000020670PUF609881.952ENSHCOG00000015541puf60b10081.550Hippocampus_comes
ENSPTRG00000020670PUF609778.383ENSIPUG00000004660puf60b9978.154Ictalurus_punctatus
ENSPTRG00000020670PUF609782.420ENSIPUG00000002453puf60a9982.798Ictalurus_punctatus
ENSPTRG00000020670PUF6010099.106ENSSTOG00000025037PUF6010099.106Ictidomys_tridecemlineatus
ENSPTRG00000020670PUF6010098.399ENSJJAG00000001076Puf6010098.399Jaculus_jaculus
ENSPTRG00000020670PUF609784.837ENSKMAG00000016745puf60b10085.988Kryptolebias_marmoratus
ENSPTRG00000020670PUF609778.072ENSKMAG00000010106-10075.560Kryptolebias_marmoratus
ENSPTRG00000020670PUF609983.117ENSLBEG00000012505puf60b10083.117Labrus_bergylta
ENSPTRG00000020670PUF606891.460ENSLACG00000005456PUF6010090.984Latimeria_chalumnae
ENSPTRG00000020670PUF6010089.493ENSLOCG00000010106puf60b10088.368Lepisosteus_oculatus
ENSPTRG00000020670PUF609897.701ENSLAFG00000022929PUF6010095.878Loxodonta_africana
ENSPTRG00000020670PUF6010099.821ENSMFAG00000043373PUF6010099.821Macaca_fascicularis
ENSPTRG00000020670PUF6010099.811ENSMMUG00000013558PUF6010099.811Macaca_mulatta
ENSPTRG00000020670PUF6010099.821ENSMNEG00000031099PUF6010099.821Macaca_nemestrina
ENSPTRG00000020670PUF609799.806ENSMLEG00000040009PUF6010099.806Mandrillus_leucophaeus
ENSPTRG00000020670PUF609984.270ENSMAMG00000010394puf60b10083.551Mastacembelus_armatus
ENSPTRG00000020670PUF609981.989ENSMAMG00000019476-9981.973Mastacembelus_armatus
ENSPTRG00000020670PUF609981.238ENSMZEG00005019425-9981.784Maylandia_zebra
ENSPTRG00000020670PUF609785.413ENSMZEG00005018515puf60b10085.413Maylandia_zebra
ENSPTRG00000020670PUF609997.524ENSMGAG00000013070PUF609997.524Meleagris_gallopavo
ENSPTRG00000020670PUF607297.304ENSMAUG00000014267-10097.304Mesocricetus_auratus
ENSPTRG00000020670PUF6010076.636ENSMAUG00000018549-10076.636Mesocricetus_auratus
ENSPTRG00000020670PUF6010099.434ENSMICG00000012226PUF6010099.434Microcebus_murinus
ENSPTRG00000020670PUF6010097.872ENSMOCG00000018780Puf6010097.872Microtus_ochrogaster
ENSPTRG00000020670PUF609872.658ENSMMOG00000018059-9976.484Mola_mola
ENSPTRG00000020670PUF609785.605ENSMMOG00000004217puf60b10085.605Mola_mola
ENSPTRG00000020670PUF6010097.417ENSMODG00000009161PUF6010097.417Monodelphis_domestica
ENSPTRG00000020670PUF609979.887ENSMALG00000000200-9979.057Monopterus_albus
ENSPTRG00000020670PUF609877.609ENSMALG00000006797puf60b9977.652Monopterus_albus
ENSPTRG00000020670PUF6010097.695MGP_CAROLIEiJ_G0019910Puf6010097.695Mus_caroli
ENSPTRG00000020670PUF6010097.695ENSMUSG00000002524Puf6010097.695Mus_musculus
ENSPTRG00000020670PUF6010097.695MGP_PahariEiJ_G0019920Puf6010097.695Mus_pahari
ENSPTRG00000020670PUF6010097.695MGP_SPRETEiJ_G0020812Puf6010097.695Mus_spretus
ENSPTRG00000020670PUF609998.730ENSMPUG00000008137PUF609798.730Mustela_putorius_furo
ENSPTRG00000020670PUF609998.185ENSMLUG00000000238-9898.185Myotis_lucifugus
ENSPTRG00000020670PUF6010091.321ENSMLUG00000013032-9894.851Myotis_lucifugus
ENSPTRG00000020670PUF6010098.050ENSNGAG00000000712Puf6010098.837Nannospalax_galili
ENSPTRG00000020670PUF609981.426ENSNBRG00000017223-9981.939Neolamprologus_brichardi
ENSPTRG00000020670PUF608281.236ENSNBRG00000013047puf60b9784.235Neolamprologus_brichardi
ENSPTRG00000020670PUF6010099.821ENSNLEG00000002156PUF6010099.821Nomascus_leucogenys
ENSPTRG00000020670PUF607399.659ENSOPRG00000002147PUF607599.659Ochotona_princeps
ENSPTRG00000020670PUF609573.767ENSODEG00000015513-9970.998Octodon_degus
ENSPTRG00000020670PUF6074100.000ENSODEG00000014024-100100.000Octodon_degus
ENSPTRG00000020670PUF609981.579ENSONIG00000014030-9982.008Oreochromis_niloticus
ENSPTRG00000020670PUF609984.181ENSONIG00000006247puf60b9984.659Oreochromis_niloticus
ENSPTRG00000020670PUF609678.278ENSOANG00000006962PUF609978.405Ornithorhynchus_anatinus
ENSPTRG00000020670PUF609778.598ENSORLG00000028655-9978.707Oryzias_latipes
ENSPTRG00000020670PUF609983.865ENSORLG00000012279puf60b10084.837Oryzias_latipes
ENSPTRG00000020670PUF609983.865ENSORLG00020007333puf6010084.837Oryzias_latipes_hni
ENSPTRG00000020670PUF609977.985ENSORLG00020018144-9978.090Oryzias_latipes_hni
ENSPTRG00000020670PUF609982.991ENSORLG00015007718puf60b10084.704Oryzias_latipes_hsok
ENSPTRG00000020670PUF609978.067ENSORLG00015016833-9978.172Oryzias_latipes_hsok
ENSPTRG00000020670PUF609978.987ENSOMEG00000022185-9978.987Oryzias_melastigma
ENSPTRG00000020670PUF609981.618ENSOMEG00000001643puf60b9983.030Oryzias_melastigma
ENSPTRG00000020670PUF609899.234ENSOGAG00000006259PUF609998.208Otolemur_garnettii
ENSPTRG00000020670PUF609896.552ENSOARG00000016235PUF609996.558Ovis_aries
ENSPTRG00000020670PUF6010099.821ENSPPAG00000029933PUF6010099.821Pan_paniscus
ENSPTRG00000020670PUF6010099.057ENSPPRG00000003257PUF6010099.057Panthera_pardus
ENSPTRG00000020670PUF609998.505ENSPTIG00000009795PUF609996.743Panthera_tigris_altaica
ENSPTRG00000020670PUF6010099.821ENSPANG00000021936PUF6010099.821Papio_anubis
ENSPTRG00000020670PUF6010086.517ENSPKIG00000012204puf60b10087.885Paramormyrops_kingsleyae
ENSPTRG00000020670PUF6010085.102ENSPKIG00000004295puf60a9992.059Paramormyrops_kingsleyae
ENSPTRG00000020670PUF609897.701ENSPSIG00000004679PUF609997.706Pelodiscus_sinensis
ENSPTRG00000020670PUF609784.351ENSPMGG00000013444puf60b9984.351Periophthalmus_magnuspinnatus
ENSPTRG00000020670PUF6010097.872ENSPEMG00000008820Puf6010097.872Peromyscus_maniculatus_bairdii
ENSPTRG00000020670PUF609998.853ENSPCIG00000020270PUF609999.040Phascolarctos_cinereus
ENSPTRG00000020670PUF609979.473ENSPFOG00000011118-9979.811Poecilia_formosa
ENSPTRG00000020670PUF6010083.364ENSPFOG00000019217puf60b10084.630Poecilia_formosa
ENSPTRG00000020670PUF609784.837ENSPLAG00000010754puf60b10085.988Poecilia_latipinna
ENSPTRG00000020670PUF609979.473ENSPLAG00000017025-9279.434Poecilia_latipinna
ENSPTRG00000020670PUF609979.473ENSPMEG00000009767-9279.811Poecilia_mexicana
ENSPTRG00000020670PUF6010083.364ENSPMEG00000000838puf60b10085.988Poecilia_mexicana
ENSPTRG00000020670PUF6010080.692ENSPREG00000005440puf60b10083.730Poecilia_reticulata
ENSPTRG00000020670PUF607998.082ENSPPYG00000018951-9598.082Pongo_abelii
ENSPTRG00000020670PUF607999.041ENSPCAG00000014837PUF6010099.041Procavia_capensis
ENSPTRG00000020670PUF6010099.245ENSPCOG00000027981PUF6010099.245Propithecus_coquereli
ENSPTRG00000020670PUF6097100.000ENSPVAG00000016167PUF6081100.000Pteropus_vampyrus
ENSPTRG00000020670PUF609785.413ENSPNYG00000002556puf60b10085.413Pundamilia_nyererei
ENSPTRG00000020670PUF609981.238ENSPNYG00000004273-9981.784Pundamilia_nyererei
ENSPTRG00000020670PUF609982.075ENSPNAG00000019909puf60a9984.766Pygocentrus_nattereri
ENSPTRG00000020670PUF609976.648ENSPNAG00000019415puf60b9178.599Pygocentrus_nattereri
ENSPTRG00000020670PUF6010097.623ENSRNOG00000009960Puf6010097.623Rattus_norvegicus
ENSPTRG00000020670PUF6010099.821ENSRBIG00000035274PUF6010099.821Rhinopithecus_bieti
ENSPTRG00000020670PUF6010099.821ENSRROG00000029360PUF6010099.821Rhinopithecus_roxellana
ENSPTRG00000020670PUF609998.092ENSSBOG00000027089PUF609997.732Saimiri_boliviensis_boliviensis
ENSPTRG00000020670PUF609196.647ENSSHAG00000006668PUF609696.647Sarcophilus_harrisii
ENSPTRG00000020670PUF609386.032ENSSFOG00015019619puf60b9986.032Scleropages_formosus
ENSPTRG00000020670PUF6010080.536ENSSFOG00015019371puf60a9886.922Scleropages_formosus
ENSPTRG00000020670PUF607391.638ENSSMAG00000016381puf60b7491.638Scophthalmus_maximus
ENSPTRG00000020670PUF609979.434ENSSDUG00000007048-9979.811Seriola_dumerili
ENSPTRG00000020670PUF609983.302ENSSDUG00000009935puf60b10083.302Seriola_dumerili
ENSPTRG00000020670PUF609780.228ENSSLDG00000007366-9980.645Seriola_lalandi_dorsalis
ENSPTRG00000020670PUF609885.361ENSSLDG00000024011puf60b10083.738Seriola_lalandi_dorsalis
ENSPTRG00000020670PUF606485.841ENSSPUG00000013518PUF609485.163Sphenodon_punctatus
ENSPTRG00000020670PUF609781.870ENSSPAG00000020285-10082.443Stegastes_partitus
ENSPTRG00000020670PUF609981.901ENSSPAG00000012144puf60b10083.925Stegastes_partitus
ENSPTRG00000020670PUF609997.846ENSSSCG00000038800PUF609898.614Sus_scrofa
ENSPTRG00000020670PUF609894.636ENSTGUG00000012797-10094.636Taeniopygia_guttata
ENSPTRG00000020670PUF609777.519ENSTRUG00000008843-10080.160Takifugu_rubripes
ENSPTRG00000020670PUF609884.061ENSTRUG00000005420puf60b10082.617Takifugu_rubripes
ENSPTRG00000020670PUF609877.778ENSTNIG00000003069-10077.820Tetraodon_nigroviridis
ENSPTRG00000020670PUF609884.061ENSTNIG00000013675puf60b10083.902Tetraodon_nigroviridis
ENSPTRG00000020670PUF606095.270ENSTBEG00000002751-9995.254Tupaia_belangeri
ENSPTRG00000020670PUF607981.214ENSTBEG00000001899-10081.503Tupaia_belangeri
ENSPTRG00000020670PUF609798.450ENSTTRG00000017088PUF6010098.450Tursiops_truncatus
ENSPTRG00000020670PUF6010099.434ENSUAMG00000024917PUF6010099.434Ursus_americanus
ENSPTRG00000020670PUF609894.253ENSUMAG00000000272PUF609994.011Ursus_maritimus
ENSPTRG00000020670PUF609999.275ENSVVUG00000022527PUF6010099.419Vulpes_vulpes
ENSPTRG00000020670PUF609894.434ENSXETG00000012469puf609994.444Xenopus_tropicalis
ENSPTRG00000020670PUF609781.574ENSXCOG00000012355puf60b10085.516Xiphophorus_couchianus
ENSPTRG00000020670PUF6010083.364ENSXMAG00000001862puf60b10085.988Xiphophorus_maculatus
ENSPTRG00000020670PUF609977.419ENSXMAG00000010507-9979.528Xiphophorus_maculatus

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