EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPTRG00000020743 (Gene tree)
Gene ID: 464978
Gene Symbol: RCL1
Alias: -
Full Name: RNA terminal phosphate cyclase like 1
Gene Type: protein_coding
Species: Pan_troglodytes
Status: putative
Strand: Plus strand
Length: 68710 bases
Position: chr9:4831800-4900509
Accession: 9196
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTRP00000035488	RTC	PF01137.21	6.3e-61	1	1
ENSPTRP00000078544	RTC	PF01137.21	3.3e-07	1	1
ENSPTRP00000035488	RTC_insert	PF05189.13	1.1e-36	1	1
ENSPTRP00000078544	RTC_insert	PF05189.13	1.7e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTRT00000038388	-	2605	XM_016960551	ENSPTRP00000035488	373 (aa)	XP_016816040	K7AXQ4
ENSPTRT00000106306	-	3136	XM_009456269	ENSPTRP00000078544	187 (aa)	XP_009454544	A0A2J8M4Z6

Gene Model

Click here to download ENSPTRG00000020743's gene model file

Pathways

Pathway ID	Pathway Name	Source
ptr03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000020743's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTRG00000020743	RCL1	100	100.000	ENSG00000120158	RCL1	100	100.000	Homo_sapiens
ENSPTRG00000020743	RCL1	100	78.877	ENSAPOG00000015666	rcl1	100	78.877	Acanthochromis_polyacanthus
ENSPTRG00000020743	RCL1	100	97.051	ENSAMEG00000002631	RCL1	100	97.051	Ailuropoda_melanoleuca
ENSPTRG00000020743	RCL1	97	82.967	ENSACIG00000021195	rcl1	99	78.919	Amphilophus_citrinellus
ENSPTRG00000020743	RCL1	100	78.342	ENSAOCG00000002223	rcl1	100	78.342	Amphiprion_ocellaris
ENSPTRG00000020743	RCL1	100	78.610	ENSAPEG00000006905	rcl1	100	78.610	Amphiprion_percula
ENSPTRG00000020743	RCL1	99	76.216	ENSATEG00000020026	rcl1	99	76.216	Anabas_testudineus
ENSPTRG00000020743	RCL1	97	86.740	ENSAPLG00000006031	RCL1	100	86.890	Anas_platyrhynchos
ENSPTRG00000020743	RCL1	100	85.255	ENSACAG00000003640	RCL1	100	85.255	Anolis_carolinensis
ENSPTRG00000020743	RCL1	100	98.391	ENSANAG00000037372	RCL1	100	98.391	Aotus_nancymaae
ENSPTRG00000020743	RCL1	97	82.418	ENSACLG00000021724	rcl1	99	78.378	Astatotilapia_calliptera
ENSPTRG00000020743	RCL1	97	80.220	ENSAMXG00000033394	rcl1	99	78.533	Astyanax_mexicanus
ENSPTRG00000020743	RCL1	99	47.074	WBGene00022852	ZK1127.5	99	47.074	Caenorhabditis_elegans
ENSPTRG00000020743	RCL1	100	99.196	ENSCJAG00000011202	RCL1	100	99.196	Callithrix_jacchus
ENSPTRG00000020743	RCL1	100	95.979	ENSCAFG00000002091	RCL1	100	95.979	Canis_familiaris
ENSPTRG00000020743	RCL1	100	95.979	ENSCAFG00020000638	RCL1	78	95.979	Canis_lupus_dingo
ENSPTRG00000020743	RCL1	100	95.979	ENSCHIG00000012407	RCL1	100	95.979	Capra_hircus
ENSPTRG00000020743	RCL1	100	97.326	ENSTSYG00000009592	RCL1	100	97.326	Carlito_syrichta
ENSPTRG00000020743	RCL1	68	80.347	ENSCAPG00000013575	RCL1	100	80.347	Cavia_aperea
ENSPTRG00000020743	RCL1	100	96.783	ENSCPOG00000015354	RCL1	100	96.783	Cavia_porcellus
ENSPTRG00000020743	RCL1	100	99.196	ENSCCAG00000033505	RCL1	100	99.196	Cebus_capucinus
ENSPTRG00000020743	RCL1	100	99.465	ENSCATG00000034721	RCL1	100	99.465	Cercocebus_atys
ENSPTRG00000020743	RCL1	100	97.051	ENSCLAG00000007445	RCL1	100	97.051	Chinchilla_lanigera
ENSPTRG00000020743	RCL1	100	98.928	ENSCSAG00000008811	RCL1	100	98.928	Chlorocebus_sabaeus
ENSPTRG00000020743	RCL1	87	81.734	ENSCHOG00000007216	RCL1	100	81.734	Choloepus_hoffmanni
ENSPTRG00000020743	RCL1	100	89.276	ENSCPBG00000025481	RCL1	94	89.058	Chrysemys_picta_bellii
ENSPTRG00000020743	RCL1	98	58.649	ENSCING00000019565	-	98	58.649	Ciona_intestinalis
ENSPTRG00000020743	RCL1	100	99.196	ENSCANG00000027099	RCL1	100	99.196	Colobus_angolensis_palliatus
ENSPTRG00000020743	RCL1	100	95.710	ENSCGRG00001013748	Rcl1	100	95.710	Cricetulus_griseus_chok1gshd
ENSPTRG00000020743	RCL1	97	95.028	ENSCGRG00000005843	Rcl1	99	95.732	Cricetulus_griseus_crigri
ENSPTRG00000020743	RCL1	97	81.868	ENSCSEG00000000712	rcl1	97	79.459	Cynoglossus_semilaevis
ENSPTRG00000020743	RCL1	97	82.418	ENSCVAG00000011536	rcl1	99	80.000	Cyprinodon_variegatus
ENSPTRG00000020743	RCL1	97	80.769	ENSDARG00000038312	rcl1	100	76.022	Danio_rerio
ENSPTRG00000020743	RCL1	97	96.685	ENSDNOG00000019911	RCL1	100	96.744	Dasypus_novemcinctus
ENSPTRG00000020743	RCL1	100	96.247	ENSDORG00000015645	Rcl1	100	96.247	Dipodomys_ordii
ENSPTRG00000020743	RCL1	99	53.704	FBgn0020909	Rtc1	98	53.704	Drosophila_melanogaster
ENSPTRG00000020743	RCL1	72	100.000	ENSETEG00000014087	-	82	100.000	Echinops_telfairi
ENSPTRG00000020743	RCL1	100	53.600	ENSEBUG00000016621	-	100	53.600	Eptatretus_burgeri
ENSPTRG00000020743	RCL1	100	97.319	ENSEASG00005010653	RCL1	100	97.319	Equus_asinus_asinus
ENSPTRG00000020743	RCL1	100	97.319	ENSECAG00000015973	RCL1	100	97.319	Equus_caballus
ENSPTRG00000020743	RCL1	100	81.501	ENSEEUG00000009801	RCL1	100	81.501	Erinaceus_europaeus
ENSPTRG00000020743	RCL1	100	75.401	ENSELUG00000007353	rcl1	100	75.401	Esox_lucius
ENSPTRG00000020743	RCL1	100	95.174	ENSFCAG00000014557	RCL1	100	95.174	Felis_catus
ENSPTRG00000020743	RCL1	97	86.188	ENSFALG00000010553	RCL1	94	82.535	Ficedula_albicollis
ENSPTRG00000020743	RCL1	97	95.580	ENSFDAG00000004209	RCL1	100	96.330	Fukomys_damarensis
ENSPTRG00000020743	RCL1	97	82.418	ENSFHEG00000011228	rcl1	99	79.459	Fundulus_heteroclitus
ENSPTRG00000020743	RCL1	97	80.769	ENSGMOG00000004677	rcl1	99	77.297	Gadus_morhua
ENSPTRG00000020743	RCL1	99	86.179	ENSGALG00000015024	RCL1	99	86.179	Gallus_gallus
ENSPTRG00000020743	RCL1	99	77.838	ENSGAFG00000007257	rcl1	99	77.838	Gambusia_affinis
ENSPTRG00000020743	RCL1	100	77.005	ENSGACG00000017474	rcl1	100	77.005	Gasterosteus_aculeatus
ENSPTRG00000020743	RCL1	100	89.812	ENSGAGG00000003689	RCL1	100	89.812	Gopherus_agassizii
ENSPTRG00000020743	RCL1	100	99.465	ENSGGOG00000015041	RCL1	100	99.465	Gorilla_gorilla
ENSPTRG00000020743	RCL1	97	82.967	ENSHBUG00000001393	rcl1	99	78.649	Haplochromis_burtoni
ENSPTRG00000020743	RCL1	97	87.293	ENSHGLG00000005368	-	100	80.429	Heterocephalus_glaber_female
ENSPTRG00000020743	RCL1	100	97.051	ENSHGLG00000016452	RCL1	100	97.051	Heterocephalus_glaber_female
ENSPTRG00000020743	RCL1	98	86.413	ENSHGLG00100018010	-	100	81.501	Heterocephalus_glaber_male
ENSPTRG00000020743	RCL1	97	96.685	ENSHGLG00100008718	-	100	90.349	Heterocephalus_glaber_male
ENSPTRG00000020743	RCL1	97	80.769	ENSHCOG00000020170	rcl1	99	77.838	Hippocampus_comes
ENSPTRG00000020743	RCL1	98	79.348	ENSIPUG00000018054	RCL1	99	79.348	Ictalurus_punctatus
ENSPTRG00000020743	RCL1	100	97.051	ENSSTOG00000000023	RCL1	100	97.051	Ictidomys_tridecemlineatus
ENSPTRG00000020743	RCL1	100	95.174	ENSJJAG00000022803	-	100	95.174	Jaculus_jaculus
ENSPTRG00000020743	RCL1	90	72.619	ENSJJAG00000000764	-	95	72.680	Jaculus_jaculus
ENSPTRG00000020743	RCL1	100	84.182	ENSJJAG00000015632	-	100	84.182	Jaculus_jaculus
ENSPTRG00000020743	RCL1	98	77.657	ENSKMAG00000011946	rcl1	99	77.657	Kryptolebias_marmoratus
ENSPTRG00000020743	RCL1	97	83.516	ENSLBEG00000003957	rcl1	99	75.946	Labrus_bergylta
ENSPTRG00000020743	RCL1	91	80.826	ENSLACG00000004594	RCL1	98	84.858	Latimeria_chalumnae
ENSPTRG00000020743	RCL1	100	81.233	ENSLOCG00000010148	rcl1	98	81.233	Lepisosteus_oculatus
ENSPTRG00000020743	RCL1	100	93.298	ENSLAFG00000017495	RCL1	100	93.298	Loxodonta_africana
ENSPTRG00000020743	RCL1	100	98.928	ENSMFAG00000037906	RCL1	100	98.928	Macaca_fascicularis
ENSPTRG00000020743	RCL1	100	99.465	ENSMNEG00000012288	RCL1	100	99.465	Macaca_nemestrina
ENSPTRG00000020743	RCL1	100	98.928	ENSMLEG00000043088	RCL1	100	98.928	Mandrillus_leucophaeus
ENSPTRG00000020743	RCL1	97	81.319	ENSMAMG00000008311	rcl1	99	78.649	Mastacembelus_armatus
ENSPTRG00000020743	RCL1	97	82.418	ENSMZEG00005017292	rcl1	99	78.378	Maylandia_zebra
ENSPTRG00000020743	RCL1	96	86.667	ENSMGAG00000002245	RCL1	97	83.962	Meleagris_gallopavo
ENSPTRG00000020743	RCL1	97	95.580	ENSMAUG00000008922	Rcl1	100	96.279	Mesocricetus_auratus
ENSPTRG00000020743	RCL1	100	96.515	ENSMICG00000015562	RCL1	100	96.515	Microcebus_murinus
ENSPTRG00000020743	RCL1	100	96.783	ENSMOCG00000012145	Rcl1	100	96.783	Microtus_ochrogaster
ENSPTRG00000020743	RCL1	99	75.472	ENSMMOG00000021264	rcl1	99	75.472	Mola_mola
ENSPTRG00000020743	RCL1	95	93.239	ENSMODG00000015377	RCL1	94	93.239	Monodelphis_domestica
ENSPTRG00000020743	RCL1	97	80.220	ENSMALG00000018618	rcl1	99	77.297	Monopterus_albus
ENSPTRG00000020743	RCL1	100	96.515	MGP_CAROLIEiJ_G0022853	Rcl1	100	96.515	Mus_caroli
ENSPTRG00000020743	RCL1	100	96.515	ENSMUSG00000024785	Rcl1	100	96.515	Mus_musculus
ENSPTRG00000020743	RCL1	100	95.979	MGP_PahariEiJ_G0014346	Rcl1	100	97.059	Mus_pahari
ENSPTRG00000020743	RCL1	100	95.710	MGP_SPRETEiJ_G0023771	Rcl1	100	96.471	Mus_spretus
ENSPTRG00000020743	RCL1	100	95.979	ENSMPUG00000004998	RCL1	100	95.979	Mustela_putorius_furo
ENSPTRG00000020743	RCL1	100	96.515	ENSMLUG00000009654	RCL1	100	96.515	Myotis_lucifugus
ENSPTRG00000020743	RCL1	100	97.051	ENSNGAG00000015327	Rcl1	100	97.051	Nannospalax_galili
ENSPTRG00000020743	RCL1	97	82.418	ENSNBRG00000019854	rcl1	96	74.302	Neolamprologus_brichardi
ENSPTRG00000020743	RCL1	100	96.247	ENSNLEG00000008891	RCL1	100	96.247	Nomascus_leucogenys
ENSPTRG00000020743	RCL1	97	93.370	ENSMEUG00000007653	RCL1	100	86.595	Notamacropus_eugenii
ENSPTRG00000020743	RCL1	100	96.247	ENSOPRG00000010965	RCL1	100	96.247	Ochotona_princeps
ENSPTRG00000020743	RCL1	98	96.739	ENSODEG00000004151	RCL1	96	80.793	Octodon_degus
ENSPTRG00000020743	RCL1	97	82.418	ENSONIG00000003871	rcl1	99	78.378	Oreochromis_niloticus
ENSPTRG00000020743	RCL1	96	88.827	ENSOANG00000013193	-	100	87.747	Ornithorhynchus_anatinus
ENSPTRG00000020743	RCL1	100	97.855	ENSOCUG00000008161	RCL1	100	97.855	Oryctolagus_cuniculus
ENSPTRG00000020743	RCL1	100	76.471	ENSORLG00000010443	rcl1	100	76.471	Oryzias_latipes
ENSPTRG00000020743	RCL1	100	76.471	ENSORLG00020012211	rcl1	100	76.471	Oryzias_latipes_hni
ENSPTRG00000020743	RCL1	100	76.203	ENSORLG00015001122	rcl1	100	76.203	Oryzias_latipes_hsok
ENSPTRG00000020743	RCL1	97	80.769	ENSOMEG00000022976	rcl1	88	77.540	Oryzias_melastigma
ENSPTRG00000020743	RCL1	100	95.442	ENSOGAG00000007480	RCL1	100	95.442	Otolemur_garnettii
ENSPTRG00000020743	RCL1	100	96.247	ENSOARG00000013463	RCL1	100	96.247	Ovis_aries
ENSPTRG00000020743	RCL1	100	99.732	ENSPPAG00000037958	RCL1	100	99.732	Pan_paniscus
ENSPTRG00000020743	RCL1	100	94.370	ENSPPRG00000022645	RCL1	100	94.370	Panthera_pardus
ENSPTRG00000020743	RCL1	97	94.475	ENSPTIG00000019031	RCL1	97	94.712	Panthera_tigris_altaica
ENSPTRG00000020743	RCL1	100	98.928	ENSPANG00000025151	RCL1	100	98.928	Papio_anubis
ENSPTRG00000020743	RCL1	97	82.418	ENSPKIG00000021022	rcl1	100	78.075	Paramormyrops_kingsleyae
ENSPTRG00000020743	RCL1	97	89.503	ENSPSIG00000012302	RCL1	100	89.329	Pelodiscus_sinensis
ENSPTRG00000020743	RCL1	100	76.203	ENSPMGG00000024007	rcl1	100	76.203	Periophthalmus_magnuspinnatus
ENSPTRG00000020743	RCL1	100	96.783	ENSPEMG00000023275	Rcl1	100	96.783	Peromyscus_maniculatus_bairdii
ENSPTRG00000020743	RCL1	97	30.959	ENSPMAG00000009110	rtca	96	30.959	Petromyzon_marinus
ENSPTRG00000020743	RCL1	95	69.663	ENSPMAG00000005419	-	95	69.663	Petromyzon_marinus
ENSPTRG00000020743	RCL1	100	93.566	ENSPCIG00000000188	RCL1	100	93.566	Phascolarctos_cinereus
ENSPTRG00000020743	RCL1	97	80.769	ENSPFOG00000019682	rcl1	99	78.649	Poecilia_formosa
ENSPTRG00000020743	RCL1	97	80.769	ENSPLAG00000022354	rcl1	99	78.649	Poecilia_latipinna
ENSPTRG00000020743	RCL1	97	80.769	ENSPMEG00000008131	rcl1	99	78.649	Poecilia_mexicana
ENSPTRG00000020743	RCL1	99	78.378	ENSPREG00000008032	rcl1	99	78.378	Poecilia_reticulata
ENSPTRG00000020743	RCL1	100	99.196	ENSPPYG00000019244	RCL1	100	99.196	Pongo_abelii
ENSPTRG00000020743	RCL1	100	85.523	ENSPCAG00000001440	RCL1	100	85.523	Procavia_capensis
ENSPTRG00000020743	RCL1	100	98.396	ENSPCOG00000009611	RCL1	100	98.396	Propithecus_coquereli
ENSPTRG00000020743	RCL1	100	96.783	ENSPVAG00000015752	RCL1	100	96.783	Pteropus_vampyrus
ENSPTRG00000020743	RCL1	97	82.418	ENSPNYG00000012910	rcl1	99	78.378	Pundamilia_nyererei
ENSPTRG00000020743	RCL1	97	82.418	ENSPNAG00000028307	rcl1	92	78.016	Pygocentrus_nattereri
ENSPTRG00000020743	RCL1	100	96.247	ENSRNOG00000015491	Rcl1	100	96.247	Rattus_norvegicus
ENSPTRG00000020743	RCL1	100	98.928	ENSRBIG00000035818	RCL1	100	98.928	Rhinopithecus_bieti
ENSPTRG00000020743	RCL1	100	99.465	ENSRROG00000029781	RCL1	100	99.465	Rhinopithecus_roxellana
ENSPTRG00000020743	RCL1	98	36.216	YOL010W	-	97	35.040	Saccharomyces_cerevisiae
ENSPTRG00000020743	RCL1	100	98.930	ENSSBOG00000026369	RCL1	100	98.930	Saimiri_boliviensis_boliviensis
ENSPTRG00000020743	RCL1	96	93.333	ENSSHAG00000014086	RCL1	100	92.424	Sarcophilus_harrisii
ENSPTRG00000020743	RCL1	97	81.319	ENSSFOG00015023020	rcl1	100	77.807	Scleropages_formosus
ENSPTRG00000020743	RCL1	97	80.769	ENSSMAG00000019751	rcl1	85	78.649	Scophthalmus_maximus
ENSPTRG00000020743	RCL1	100	77.540	ENSSDUG00000006349	rcl1	100	77.540	Seriola_dumerili
ENSPTRG00000020743	RCL1	97	81.319	ENSSLDG00000022076	rcl1	100	77.807	Seriola_lalandi_dorsalis
ENSPTRG00000020743	RCL1	100	95.710	ENSSARG00000009260	RCL1	100	95.710	Sorex_araneus
ENSPTRG00000020743	RCL1	100	88.204	ENSSPUG00000016330	RCL1	100	88.204	Sphenodon_punctatus
ENSPTRG00000020743	RCL1	100	79.679	ENSSPAG00000018038	rcl1	100	79.679	Stegastes_partitus
ENSPTRG00000020743	RCL1	100	97.587	ENSSSCG00000005217	RCL1	83	97.587	Sus_scrofa
ENSPTRG00000020743	RCL1	100	85.067	ENSTGUG00000005138	RCL1	100	85.067	Taeniopygia_guttata
ENSPTRG00000020743	RCL1	97	80.769	ENSTRUG00000010493	rcl1	99	78.108	Takifugu_rubripes
ENSPTRG00000020743	RCL1	99	77.236	ENSTNIG00000013214	rcl1	99	77.236	Tetraodon_nigroviridis
ENSPTRG00000020743	RCL1	97	96.685	ENSTBEG00000016339	RCL1	100	90.349	Tupaia_belangeri
ENSPTRG00000020743	RCL1	100	96.247	ENSTTRG00000016525	RCL1	100	96.247	Tursiops_truncatus
ENSPTRG00000020743	RCL1	100	97.051	ENSUAMG00000005598	RCL1	100	97.051	Ursus_americanus
ENSPTRG00000020743	RCL1	97	96.685	ENSUMAG00000017890	RCL1	97	96.330	Ursus_maritimus
ENSPTRG00000020743	RCL1	97	97.790	ENSVPAG00000009188	RCL1	100	97.859	Vicugna_pacos
ENSPTRG00000020743	RCL1	97	96.685	ENSVVUG00000007304	RCL1	89	96.341	Vulpes_vulpes
ENSPTRG00000020743	RCL1	100	74.866	ENSXETG00000000592	rcl1	100	74.866	Xenopus_tropicalis
ENSPTRG00000020743	RCL1	59	30.455	ENSXCOG00000008002	rtca	63	30.455	Xiphophorus_couchianus
ENSPTRG00000020743	RCL1	97	80.769	ENSXCOG00000004922	rcl1	99	78.649	Xiphophorus_couchianus
ENSPTRG00000020743	RCL1	97	80.769	ENSXMAG00000022366	RCL1	99	78.649	Xiphophorus_maculatus