EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPTRG00000020850 (Gene tree)
Gene ID: 465037
Gene Symbol: APTX
Alias: -
Full Name: aprataxin
Gene Type: protein_coding
Species: Pan_troglodytes
Status: putative
Strand: Minus strand
Length: 29016 bases
Position: chr9:33692587-33721602
Accession: 8801
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTRP00000035654	DcpS_C	PF11969.8	1.1e-33	1	1
ENSPTRP00000067770	DcpS_C	PF11969.8	1.3e-33	1	1
ENSPTRP00000082797	DcpS_C	PF11969.8	1.4e-33	1	1
ENSPTRP00000090617	DcpS_C	PF11969.8	5.3e-33	1	1
ENSPTRP00000067912	DcpS_C	PF11969.8	5.3e-33	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTRT00000093954	-	1011	-	ENSPTRP00000090617	336 (aa)	-	A0A2I3TMZ9
ENSPTRT00000107276	-	1065	-	ENSPTRP00000082797	354 (aa)	-	A0A2I3T0S5
ENSPTRT00000107647	-	2162	XM_001157209	ENSPTRP00000067770	342 (aa)	XP_001157209	A0A2J8QST2
ENSPTRT00000104093	-	1011	XM_001158138	ENSPTRP00000067912	336 (aa)	XP_001158138	A0A2I3RUB2
ENSPTRT00000038570	-	1853	XM_001157434	ENSPTRP00000035654	288 (aa)	XP_001157434	H2QX46
ENSPTRT00000076896	-	159	-	ENSPTRP00000091311	52 (aa)	-	A0A2I3TPZ2

Gene Model

Click here to download ENSPTRG00000020850's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000020850's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTRG00000020850	APTX	100	99.415	ENSG00000137074	APTX	100	100.000	Homo_sapiens
ENSPTRG00000020850	APTX	99	60.767	ENSAPOG00000008785	aptx	99	60.767	Acanthochromis_polyacanthus
ENSPTRG00000020850	APTX	99	91.176	ENSAMEG00000007648	APTX	96	91.202	Ailuropoda_melanoleuca
ENSPTRG00000020850	APTX	99	56.140	ENSACIG00000002035	aptx	99	59.561	Amphilophus_citrinellus
ENSPTRG00000020850	APTX	99	61.062	ENSAOCG00000000634	aptx	99	61.062	Amphiprion_ocellaris
ENSPTRG00000020850	APTX	99	61.062	ENSAPEG00000017253	aptx	99	61.062	Amphiprion_percula
ENSPTRG00000020850	APTX	99	60.472	ENSATEG00000017383	aptx	99	60.472	Anabas_testudineus
ENSPTRG00000020850	APTX	89	60.938	ENSAPLG00000015645	APTX	99	60.938	Anas_platyrhynchos
ENSPTRG00000020850	APTX	99	61.765	ENSACAG00000003581	APTX	95	62.281	Anolis_carolinensis
ENSPTRG00000020850	APTX	100	94.737	ENSANAG00000030160	APTX	100	92.560	Aotus_nancymaae
ENSPTRG00000020850	APTX	99	60.767	ENSACLG00000018887	aptx	100	60.767	Astatotilapia_calliptera
ENSPTRG00000020850	APTX	99	58.772	ENSAMXG00000039899	aptx	99	59.118	Astyanax_mexicanus
ENSPTRG00000020850	APTX	100	89.181	ENSBTAG00000013947	APTX	99	89.213	Bos_taurus
ENSPTRG00000020850	APTX	100	93.567	ENSCJAG00000007940	APTX	100	93.294	Callithrix_jacchus
ENSPTRG00000020850	APTX	99	92.647	ENSCAFG00000001812	APTX	99	92.647	Canis_familiaris
ENSPTRG00000020850	APTX	99	92.647	ENSCAFG00020015598	APTX	99	92.647	Canis_lupus_dingo
ENSPTRG00000020850	APTX	100	88.889	ENSCHIG00000012896	APTX	100	88.889	Capra_hircus
ENSPTRG00000020850	APTX	100	90.643	ENSTSYG00000003041	APTX	100	90.643	Carlito_syrichta
ENSPTRG00000020850	APTX	74	92.683	ENSCAPG00000013470	APTX	100	92.683	Cavia_aperea
ENSPTRG00000020850	APTX	99	89.443	ENSCPOG00000005975	APTX	100	89.535	Cavia_porcellus
ENSPTRG00000020850	APTX	100	94.152	ENSCCAG00000036783	APTX	100	93.878	Cebus_capucinus
ENSPTRG00000020850	APTX	100	96.784	ENSCATG00000042639	APTX	100	96.328	Cercocebus_atys
ENSPTRG00000020850	APTX	100	86.550	ENSCLAG00000012185	APTX	100	91.304	Chinchilla_lanigera
ENSPTRG00000020850	APTX	100	97.953	ENSCSAG00000009885	APTX	100	95.225	Chlorocebus_sabaeus
ENSPTRG00000020850	APTX	99	65.527	ENSCPBG00000023973	APTX	98	64.972	Chrysemys_picta_bellii
ENSPTRG00000020850	APTX	97	40.771	ENSCING00000008741	-	98	37.634	Ciona_intestinalis
ENSPTRG00000020850	APTX	98	39.503	ENSCSAVG00000008038	-	97	40.390	Ciona_savignyi
ENSPTRG00000020850	APTX	100	96.328	ENSCANG00000037253	APTX	100	96.328	Colobus_angolensis_palliatus
ENSPTRG00000020850	APTX	99	86.471	ENSCGRG00001000705	Aptx	99	90.110	Cricetulus_griseus_chok1gshd
ENSPTRG00000020850	APTX	99	86.471	ENSCGRG00000014159	Aptx	99	90.110	Cricetulus_griseus_crigri
ENSPTRG00000020850	APTX	99	57.771	ENSCSEG00000009549	aptx	99	57.771	Cynoglossus_semilaevis
ENSPTRG00000020850	APTX	99	58.046	ENSCVAG00000011942	aptx	99	58.046	Cyprinodon_variegatus
ENSPTRG00000020850	APTX	99	57.692	ENSDARG00000027143	aptx	99	57.692	Danio_rerio
ENSPTRG00000020850	APTX	99	90.000	ENSDNOG00000018498	APTX	97	89.244	Dasypus_novemcinctus
ENSPTRG00000020850	APTX	100	84.840	ENSDORG00000002139	Aptx	100	91.304	Dipodomys_ordii
ENSPTRG00000020850	APTX	62	39.888	FBgn0038704	CG5316	87	46.721	Drosophila_melanogaster
ENSPTRG00000020850	APTX	85	85.656	ENSETEG00000012459	APTX	79	86.429	Echinops_telfairi
ENSPTRG00000020850	APTX	99	46.328	ENSEBUG00000013914	aptx	97	46.910	Eptatretus_burgeri
ENSPTRG00000020850	APTX	100	90.351	ENSEASG00005004566	APTX	100	90.351	Equus_asinus_asinus
ENSPTRG00000020850	APTX	100	90.351	ENSECAG00000012674	APTX	93	90.379	Equus_caballus
ENSPTRG00000020850	APTX	85	85.616	ENSEEUG00000010693	APTX	99	83.224	Erinaceus_europaeus
ENSPTRG00000020850	APTX	99	92.647	ENSFCAG00000008728	APTX	99	92.647	Felis_catus
ENSPTRG00000020850	APTX	99	64.740	ENSFALG00000001230	APTX	99	64.740	Ficedula_albicollis
ENSPTRG00000020850	APTX	99	85.000	ENSFDAG00000013752	APTX	100	84.239	Fukomys_damarensis
ENSPTRG00000020850	APTX	92	51.254	ENSFHEG00000021328	aptx	73	55.944	Fundulus_heteroclitus
ENSPTRG00000020850	APTX	99	56.637	ENSGMOG00000012505	aptx	99	56.637	Gadus_morhua
ENSPTRG00000020850	APTX	99	61.714	ENSGALG00000001954	APTX	100	61.714	Gallus_gallus
ENSPTRG00000020850	APTX	99	58.997	ENSGAFG00000005086	aptx	99	58.997	Gambusia_affinis
ENSPTRG00000020850	APTX	99	59.706	ENSGACG00000017887	aptx	99	59.706	Gasterosteus_aculeatus
ENSPTRG00000020850	APTX	99	65.714	ENSGAGG00000013230	APTX	99	65.439	Gopherus_agassizii
ENSPTRG00000020850	APTX	85	97.945	ENSGGOG00000014232	APTX	100	97.895	Gorilla_gorilla
ENSPTRG00000020850	APTX	99	60.767	ENSHBUG00000021058	aptx	100	60.767	Haplochromis_burtoni
ENSPTRG00000020850	APTX	99	86.176	ENSHGLG00000015093	APTX	100	93.220	Heterocephalus_glaber_female
ENSPTRG00000020850	APTX	100	87.135	ENSHGLG00100013482	APTX	100	93.220	Heterocephalus_glaber_male
ENSPTRG00000020850	APTX	99	59.238	ENSHCOG00000018216	aptx	96	59.238	Hippocampus_comes
ENSPTRG00000020850	APTX	99	59.824	ENSIPUG00000017548	aptx	99	59.824	Ictalurus_punctatus
ENSPTRG00000020850	APTX	99	86.510	ENSSTOG00000005185	APTX	100	86.510	Ictidomys_tridecemlineatus
ENSPTRG00000020850	APTX	99	82.405	ENSJJAG00000015653	Aptx	100	82.405	Jaculus_jaculus
ENSPTRG00000020850	APTX	99	58.407	ENSKMAG00000000117	aptx	99	58.407	Kryptolebias_marmoratus
ENSPTRG00000020850	APTX	99	59.767	ENSLBEG00000015353	aptx	99	59.767	Labrus_bergylta
ENSPTRG00000020850	APTX	99	62.791	ENSLBEG00000021489	APTX	99	53.538	Labrus_bergylta
ENSPTRG00000020850	APTX	97	74.419	ENSLACG00000003376	APTX	99	61.932	Latimeria_chalumnae
ENSPTRG00000020850	APTX	99	62.573	ENSLOCG00000011556	aptx	95	62.573	Lepisosteus_oculatus
ENSPTRG00000020850	APTX	99	92.059	ENSLAFG00000005665	APTX	99	92.082	Loxodonta_africana
ENSPTRG00000020850	APTX	99	97.654	ENSMFAG00000043141	APTX	100	97.167	Macaca_fascicularis
ENSPTRG00000020850	APTX	100	97.661	ENSMMUG00000007724	APTX	100	97.175	Macaca_mulatta
ENSPTRG00000020850	APTX	100	97.076	ENSMNEG00000042341	APTX	100	97.076	Macaca_nemestrina
ENSPTRG00000020850	APTX	100	97.076	ENSMLEG00000035137	APTX	100	97.076	Mandrillus_leucophaeus
ENSPTRG00000020850	APTX	99	58.702	ENSMAMG00000018377	aptx	99	58.702	Mastacembelus_armatus
ENSPTRG00000020850	APTX	99	60.472	ENSMZEG00005022621	aptx	100	60.472	Maylandia_zebra
ENSPTRG00000020850	APTX	63	74.033	ENSMGAG00000005736	APTX	100	74.033	Meleagris_gallopavo
ENSPTRG00000020850	APTX	99	85.503	ENSMAUG00000006039	Aptx	99	89.560	Mesocricetus_auratus
ENSPTRG00000020850	APTX	99	92.669	ENSMICG00000006603	APTX	98	92.420	Microcebus_murinus
ENSPTRG00000020850	APTX	99	85.251	ENSMOCG00000000869	Aptx	99	89.560	Microtus_ochrogaster
ENSPTRG00000020850	APTX	99	62.353	ENSMMOG00000007028	aptx	99	62.353	Mola_mola
ENSPTRG00000020850	APTX	100	62.500	ENSMODG00000003365	APTX	100	62.500	Monodelphis_domestica
ENSPTRG00000020850	APTX	99	56.471	ENSMALG00000003828	aptx	99	56.471	Monopterus_albus
ENSPTRG00000020850	APTX	99	72.632	MGP_CAROLIEiJ_G0025897	-	99	89.560	Mus_caroli
ENSPTRG00000020850	APTX	99	85.546	ENSMUSG00000028411	Aptx	99	90.659	Mus_musculus
ENSPTRG00000020850	APTX	99	85.251	MGP_PahariEiJ_G0024020	Aptx	99	85.251	Mus_pahari
ENSPTRG00000020850	APTX	99	85.841	MGP_SPRETEiJ_G0026846	Aptx	97	85.841	Mus_spretus
ENSPTRG00000020850	APTX	99	90.294	ENSMPUG00000004290	APTX	99	90.294	Mustela_putorius_furo
ENSPTRG00000020850	APTX	99	91.176	ENSMLUG00000016081	APTX	95	91.202	Myotis_lucifugus
ENSPTRG00000020850	APTX	100	85.088	ENSNGAG00000016314	Aptx	100	88.043	Nannospalax_galili
ENSPTRG00000020850	APTX	99	60.882	ENSNBRG00000014199	aptx	100	60.882	Neolamprologus_brichardi
ENSPTRG00000020850	APTX	100	98.023	ENSNLEG00000032184	APTX	100	98.023	Nomascus_leucogenys
ENSPTRG00000020850	APTX	99	65.015	ENSMEUG00000004153	APTX	99	65.015	Notamacropus_eugenii
ENSPTRG00000020850	APTX	85	84.247	ENSOPRG00000012403	APTX	95	84.247	Ochotona_princeps
ENSPTRG00000020850	APTX	100	88.889	ENSODEG00000015832	-	100	90.761	Octodon_degus
ENSPTRG00000020850	APTX	99	79.585	ENSODEG00000000097	-	100	80.623	Octodon_degus
ENSPTRG00000020850	APTX	99	60.117	ENSONIG00000014541	aptx	83	60.117	Oreochromis_niloticus
ENSPTRG00000020850	APTX	85	63.607	ENSOANG00000009878	APTX	98	63.607	Ornithorhynchus_anatinus
ENSPTRG00000020850	APTX	81	93.443	ENSOCUG00000025059	-	92	93.443	Oryctolagus_cuniculus
ENSPTRG00000020850	APTX	99	90.588	ENSOCUG00000000738	-	99	90.378	Oryctolagus_cuniculus
ENSPTRG00000020850	APTX	99	57.185	ENSORLG00000006237	aptx	100	57.185	Oryzias_latipes
ENSPTRG00000020850	APTX	99	57.185	ENSORLG00020021478	aptx	100	57.185	Oryzias_latipes_hni
ENSPTRG00000020850	APTX	99	57.895	ENSORLG00015021873	aptx	100	58.075	Oryzias_latipes_hsok
ENSPTRG00000020850	APTX	99	50.700	ENSOMEG00000007875	aptx	96	50.700	Oryzias_melastigma
ENSPTRG00000020850	APTX	100	91.520	ENSOGAG00000005388	APTX	96	91.520	Otolemur_garnettii
ENSPTRG00000020850	APTX	100	89.474	ENSOARG00000009598	APTX	96	89.474	Ovis_aries
ENSPTRG00000020850	APTX	100	100.000	ENSPPAG00000030295	APTX	100	100.000	Pan_paniscus
ENSPTRG00000020850	APTX	99	92.647	ENSPPRG00000017524	APTX	99	92.647	Panthera_pardus
ENSPTRG00000020850	APTX	99	92.647	ENSPTIG00000020000	APTX	99	92.647	Panthera_tigris_altaica
ENSPTRG00000020850	APTX	100	97.368	ENSPANG00000025301	APTX	100	96.893	Papio_anubis
ENSPTRG00000020850	APTX	99	61.739	ENSPKIG00000013601	aptx	99	61.739	Paramormyrops_kingsleyae
ENSPTRG00000020850	APTX	99	68.915	ENSPSIG00000010521	APTX	95	68.915	Pelodiscus_sinensis
ENSPTRG00000020850	APTX	98	57.771	ENSPMGG00000018649	aptx	99	57.771	Periophthalmus_magnuspinnatus
ENSPTRG00000020850	APTX	99	87.906	ENSPEMG00000007747	Aptx	99	90.110	Peromyscus_maniculatus_bairdii
ENSPTRG00000020850	APTX	99	47.851	ENSPMAG00000008417	aptx	98	47.230	Petromyzon_marinus
ENSPTRG00000020850	APTX	99	68.376	ENSPCIG00000029852	APTX	100	68.376	Phascolarctos_cinereus
ENSPTRG00000020850	APTX	99	58.997	ENSPFOG00000004992	aptx	99	58.997	Poecilia_formosa
ENSPTRG00000020850	APTX	99	59.292	ENSPFOG00000005131	-	99	59.292	Poecilia_formosa
ENSPTRG00000020850	APTX	99	59.292	ENSPLAG00000007906	aptx	99	59.292	Poecilia_latipinna
ENSPTRG00000020850	APTX	99	59.292	ENSPLAG00000007960	APTX	99	59.292	Poecilia_latipinna
ENSPTRG00000020850	APTX	99	59.292	ENSPMEG00000019789	APTX	99	59.292	Poecilia_mexicana
ENSPTRG00000020850	APTX	99	59.587	ENSPMEG00000018504	aptx	99	59.587	Poecilia_mexicana
ENSPTRG00000020850	APTX	99	54.867	ENSPREG00000004375	aptx	99	58.307	Poecilia_reticulata
ENSPTRG00000020850	APTX	100	98.538	ENSPPYG00000019142	APTX	100	95.787	Pongo_abelii
ENSPTRG00000020850	APTX	99	76.176	ENSPCAG00000010014	APTX	99	76.246	Procavia_capensis
ENSPTRG00000020850	APTX	100	94.737	ENSPCOG00000016780	APTX	100	94.737	Propithecus_coquereli
ENSPTRG00000020850	APTX	99	89.118	ENSPVAG00000011468	APTX	99	87.179	Pteropus_vampyrus
ENSPTRG00000020850	APTX	99	60.767	ENSPNYG00000007675	aptx	100	60.767	Pundamilia_nyererei
ENSPTRG00000020850	APTX	99	57.647	ENSPNAG00000015984	aptx	99	57.647	Pygocentrus_nattereri
ENSPTRG00000020850	APTX	99	82.006	ENSRNOG00000006582	Aptx	99	82.006	Rattus_norvegicus
ENSPTRG00000020850	APTX	100	96.893	ENSRBIG00000042913	APTX	100	96.893	Rhinopithecus_bieti
ENSPTRG00000020850	APTX	100	96.610	ENSRROG00000035395	APTX	100	96.610	Rhinopithecus_roxellana
ENSPTRG00000020850	APTX	100	94.444	ENSSBOG00000025215	APTX	100	94.444	Saimiri_boliviensis_boliviensis
ENSPTRG00000020850	APTX	99	69.912	ENSSHAG00000012205	APTX	95	69.912	Sarcophilus_harrisii
ENSPTRG00000020850	APTX	99	66.000	ENSSFOG00015009267	aptx	99	66.000	Scleropages_formosus
ENSPTRG00000020850	APTX	99	61.652	ENSSMAG00000008839	aptx	99	61.652	Scophthalmus_maximus
ENSPTRG00000020850	APTX	99	61.652	ENSSDUG00000001989	aptx	99	61.652	Seriola_dumerili
ENSPTRG00000020850	APTX	99	61.947	ENSSLDG00000004915	aptx	99	61.947	Seriola_lalandi_dorsalis
ENSPTRG00000020850	APTX	99	65.143	ENSSPUG00000008994	APTX	86	65.143	Sphenodon_punctatus
ENSPTRG00000020850	APTX	99	61.947	ENSSPAG00000020373	aptx	99	61.947	Stegastes_partitus
ENSPTRG00000020850	APTX	99	91.176	ENSSSCG00000011001	APTX	99	91.176	Sus_scrofa
ENSPTRG00000020850	APTX	99	63.265	ENSTGUG00000001441	APTX	99	63.265	Taeniopygia_guttata
ENSPTRG00000020850	APTX	99	58.997	ENSTRUG00000009794	aptx	99	58.997	Takifugu_rubripes
ENSPTRG00000020850	APTX	99	60.588	ENSTNIG00000010570	aptx	98	60.588	Tetraodon_nigroviridis
ENSPTRG00000020850	APTX	100	83.626	ENSTBEG00000008504	APTX	99	82.670	Tupaia_belangeri
ENSPTRG00000020850	APTX	93	85.220	ENSTTRG00000007384	APTX	99	83.030	Tursiops_truncatus
ENSPTRG00000020850	APTX	100	90.643	ENSUAMG00000003700	APTX	100	90.062	Ursus_americanus
ENSPTRG00000020850	APTX	100	90.643	ENSUMAG00000005837	APTX	100	90.643	Ursus_maritimus
ENSPTRG00000020850	APTX	95	90.909	ENSVPAG00000001297	APTX	80	91.304	Vicugna_pacos
ENSPTRG00000020850	APTX	99	92.647	ENSVVUG00000021130	APTX	99	92.647	Vulpes_vulpes
ENSPTRG00000020850	APTX	99	62.286	ENSXETG00000024143	aptx	99	62.286	Xenopus_tropicalis
ENSPTRG00000020850	APTX	99	57.062	ENSXCOG00000005020	aptx	99	57.062	Xiphophorus_couchianus
ENSPTRG00000020850	APTX	99	59.882	ENSXMAG00000022086	aptx	96	59.882	Xiphophorus_maculatus