EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPTRG00000021274 (Gene tree)
Gene ID: 464671
Gene Symbol: PRPF4
Alias: -
Full Name: pre-mRNA processing factor 4
Gene Type: protein_coding
Species: Pan_troglodytes
Status: putative
Strand: Plus strand
Length: 18203 bases
Position: chr9:91232522-91250724
Accession: 4830
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTRP00000036338	PRP4	PF08799.11	8.3e-14	1	1
ENSPTRP00000062395	PRP4	PF08799.11	8.6e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTRT00000039327	-	3904	XM_009457111	ENSPTRP00000036338	522 (aa)	XP_009455386	H2QXQ4
ENSPTRT00000082975	-	1620	-	ENSPTRP00000062395	539 (aa)	-	A0A2I3RCN1

Gene Model

Click here to download ENSPTRG00000021274's gene model file

Pathways

Pathway ID	Pathway Name	Source
ptr03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000021274's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPTRG00000021274	PRPF4	56	31.111	ENSPTRG00000014989	POC1A	81	30.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTRG00000021274	PRPF4	100	100.000	ENSG00000136875	PRPF4	100	100.000	Homo_sapiens
ENSPTRG00000021274	PRPF4	96	76.987	ENSAPOG00000014132	prpf4	98	76.987	Acanthochromis_polyacanthus
ENSPTRG00000021274	PRPF4	100	99.234	ENSAMEG00000013048	PRPF4	100	98.315	Ailuropoda_melanoleuca
ENSPTRG00000021274	PRPF4	96	77.183	ENSACIG00000005579	prpf4	99	77.183	Amphilophus_citrinellus
ENSPTRG00000021274	PRPF4	96	76.832	ENSAOCG00000005457	prpf4	99	76.832	Amphiprion_ocellaris
ENSPTRG00000021274	PRPF4	96	76.634	ENSAPEG00000000776	prpf4	99	76.634	Amphiprion_percula
ENSPTRG00000021274	PRPF4	96	76.587	ENSATEG00000023013	prpf4	99	76.587	Anabas_testudineus
ENSPTRG00000021274	PRPF4	98	90.253	ENSAPLG00000006534	PRPF4	98	88.762	Anas_platyrhynchos
ENSPTRG00000021274	PRPF4	100	89.885	ENSACAG00000015110	PRPF4	100	90.249	Anolis_carolinensis
ENSPTRG00000021274	PRPF4	100	99.425	ENSANAG00000022464	PRPF4	99	97.944	Aotus_nancymaae
ENSPTRG00000021274	PRPF4	96	76.984	ENSACLG00000019031	prpf4	99	76.984	Astatotilapia_calliptera
ENSPTRG00000021274	PRPF4	97	61.228	ENSAMXG00000006756	prpf4	99	73.663	Astyanax_mexicanus
ENSPTRG00000021274	PRPF4	100	98.467	ENSBTAG00000004571	PRPF4	100	98.656	Bos_taurus
ENSPTRG00000021274	PRPF4	87	45.254	WBGene00007972	prp-4	91	45.254	Caenorhabditis_elegans
ENSPTRG00000021274	PRPF4	100	99.617	ENSCJAG00000017856	PRPF4	100	99.617	Callithrix_jacchus
ENSPTRG00000021274	PRPF4	100	99.234	ENSCAFG00000003224	PRPF4	99	98.689	Canis_familiaris
ENSPTRG00000021274	PRPF4	100	99.234	ENSCAFG00020022637	PRPF4	100	99.424	Canis_lupus_dingo
ENSPTRG00000021274	PRPF4	100	99.042	ENSCHIG00000024648	-	100	99.042	Capra_hircus
ENSPTRG00000021274	PRPF4	100	99.042	ENSTSYG00000010366	PRPF4	100	99.232	Carlito_syrichta
ENSPTRG00000021274	PRPF4	88	88.305	ENSCAPG00000008935	PRPF4	97	88.305	Cavia_aperea
ENSPTRG00000021274	PRPF4	100	92.337	ENSCPOG00000014729	-	100	92.514	Cavia_porcellus
ENSPTRG00000021274	PRPF4	100	98.659	ENSCPOG00000010747	-	100	98.848	Cavia_porcellus
ENSPTRG00000021274	PRPF4	100	99.234	ENSCCAG00000028990	PRPF4	100	99.424	Cebus_capucinus
ENSPTRG00000021274	PRPF4	100	99.042	ENSCATG00000021552	PRPF4	100	99.232	Cercocebus_atys
ENSPTRG00000021274	PRPF4	100	98.851	ENSCLAG00000013448	PRPF4	100	99.040	Chinchilla_lanigera
ENSPTRG00000021274	PRPF4	87	95.796	ENSCHOG00000007233	PRPF4	100	95.796	Choloepus_hoffmanni
ENSPTRG00000021274	PRPF4	99	91.103	ENSCPBG00000019136	PRPF4	79	87.273	Chrysemys_picta_bellii
ENSPTRG00000021274	PRPF4	96	59.055	ENSCING00000001299	-	97	58.416	Ciona_intestinalis
ENSPTRG00000021274	PRPF4	96	57.341	ENSCSAVG00000009178	-	99	58.874	Ciona_savignyi
ENSPTRG00000021274	PRPF4	100	99.234	ENSCANG00000003246	PRPF4	100	99.424	Colobus_angolensis_palliatus
ENSPTRG00000021274	PRPF4	100	99.042	ENSCGRG00001016992	Prpf4	100	99.232	Cricetulus_griseus_chok1gshd
ENSPTRG00000021274	PRPF4	100	99.042	ENSCGRG00000017560	Prpf4	100	99.232	Cricetulus_griseus_crigri
ENSPTRG00000021274	PRPF4	97	75.644	ENSCSEG00000020451	prpf4	99	75.644	Cynoglossus_semilaevis
ENSPTRG00000021274	PRPF4	97	80.000	ENSDARG00000067639	prpf4	99	80.000	Danio_rerio
ENSPTRG00000021274	PRPF4	100	98.084	ENSDNOG00000013203	PRPF4	100	98.851	Dasypus_novemcinctus
ENSPTRG00000021274	PRPF4	100	99.042	ENSDORG00000026275	Prpf4	100	99.232	Dipodomys_ordii
ENSPTRG00000021274	PRPF4	87	56.674	FBgn0036733	U4-U6-60K	99	50.547	Drosophila_melanogaster
ENSPTRG00000021274	PRPF4	100	97.323	ENSETEG00000020389	PRPF4	100	97.323	Echinops_telfairi
ENSPTRG00000021274	PRPF4	95	73.272	ENSEBUG00000015229	prpf4	86	73.733	Eptatretus_burgeri
ENSPTRG00000021274	PRPF4	100	99.425	ENSEASG00005022678	PRPF4	100	99.616	Equus_asinus_asinus
ENSPTRG00000021274	PRPF4	100	99.425	ENSECAG00000007072	PRPF4	100	99.616	Equus_caballus
ENSPTRG00000021274	PRPF4	100	78.384	ENSEEUG00000007480	PRPF4	100	78.384	Erinaceus_europaeus
ENSPTRG00000021274	PRPF4	97	80.990	ENSELUG00000007510	prpf4	99	80.990	Esox_lucius
ENSPTRG00000021274	PRPF4	100	99.617	ENSFCAG00000005514	PRPF4	100	99.617	Felis_catus
ENSPTRG00000021274	PRPF4	98	87.528	ENSFALG00000005423	PRPF4	90	85.376	Ficedula_albicollis
ENSPTRG00000021274	PRPF4	100	98.659	ENSFDAG00000005839	PRPF4	100	98.848	Fukomys_damarensis
ENSPTRG00000021274	PRPF4	96	76.190	ENSFHEG00000001300	prpf4	99	76.190	Fundulus_heteroclitus
ENSPTRG00000021274	PRPF4	98	90.020	ENSGALG00000008857	PRPF4	98	88.091	Gallus_gallus
ENSPTRG00000021274	PRPF4	65	70.882	ENSGAFG00000012164	prpf4	70	71.471	Gambusia_affinis
ENSPTRG00000021274	PRPF4	96	70.040	ENSGACG00000015476	prpf4	99	69.246	Gasterosteus_aculeatus
ENSPTRG00000021274	PRPF4	99	90.909	ENSGAGG00000025029	PRPF4	96	90.909	Gopherus_agassizii
ENSPTRG00000021274	PRPF4	100	99.814	ENSGGOG00000006943	PRPF4	100	100.000	Gorilla_gorilla
ENSPTRG00000021274	PRPF4	96	76.786	ENSHBUG00000000562	prpf4	99	76.786	Haplochromis_burtoni
ENSPTRG00000021274	PRPF4	100	81.679	ENSHGLG00000016628	-	100	82.600	Heterocephalus_glaber_female
ENSPTRG00000021274	PRPF4	100	98.659	ENSHGLG00000015191	PRPF4	100	98.848	Heterocephalus_glaber_female
ENSPTRG00000021274	PRPF4	100	80.077	ENSHGLG00000003838	-	100	80.230	Heterocephalus_glaber_female
ENSPTRG00000021274	PRPF4	100	80.077	ENSHGLG00100005571	-	100	80.230	Heterocephalus_glaber_male
ENSPTRG00000021274	PRPF4	97	79.010	ENSIPUG00000017956	PRPF4	99	79.010	Ictalurus_punctatus
ENSPTRG00000021274	PRPF4	100	98.851	ENSSTOG00000027833	PRPF4	100	99.040	Ictidomys_tridecemlineatus
ENSPTRG00000021274	PRPF4	100	99.042	ENSJJAG00000008838	Prpf4	100	99.232	Jaculus_jaculus
ENSPTRG00000021274	PRPF4	96	76.190	ENSKMAG00000013236	prpf4	99	76.190	Kryptolebias_marmoratus
ENSPTRG00000021274	PRPF4	96	75.697	ENSLBEG00000020611	prpf4	99	75.697	Labrus_bergylta
ENSPTRG00000021274	PRPF4	98	81.250	ENSLACG00000016317	PRPF4	99	80.539	Latimeria_chalumnae
ENSPTRG00000021274	PRPF4	97	81.584	ENSLOCG00000000581	prpf4	99	81.584	Lepisosteus_oculatus
ENSPTRG00000021274	PRPF4	100	98.084	ENSLAFG00000018225	PRPF4	100	98.659	Loxodonta_africana
ENSPTRG00000021274	PRPF4	100	98.851	ENSMFAG00000039397	PRPF4	100	99.040	Macaca_fascicularis
ENSPTRG00000021274	PRPF4	100	99.042	ENSMMUG00000005844	PRPF4	100	99.232	Macaca_mulatta
ENSPTRG00000021274	PRPF4	100	87.739	ENSMNEG00000033737	PRPF4	100	88.868	Macaca_nemestrina
ENSPTRG00000021274	PRPF4	100	99.042	ENSMLEG00000040284	PRPF4	100	99.232	Mandrillus_leucophaeus
ENSPTRG00000021274	PRPF4	97	76.134	ENSMAMG00000020141	prpf4	99	76.134	Mastacembelus_armatus
ENSPTRG00000021274	PRPF4	96	76.984	ENSMZEG00005023205	prpf4	99	76.984	Maylandia_zebra
ENSPTRG00000021274	PRPF4	99	88.292	ENSMGAG00000001796	PRPF4	99	87.242	Meleagris_gallopavo
ENSPTRG00000021274	PRPF4	100	98.467	ENSMAUG00000018022	Prpf4	100	98.656	Mesocricetus_auratus
ENSPTRG00000021274	PRPF4	100	98.467	ENSMICG00000015022	PRPF4	100	98.467	Microcebus_murinus
ENSPTRG00000021274	PRPF4	100	98.467	ENSMOCG00000018273	Prpf4	100	98.656	Microtus_ochrogaster
ENSPTRG00000021274	PRPF4	97	74.851	ENSMMOG00000021177	prpf4	99	74.851	Mola_mola
ENSPTRG00000021274	PRPF4	100	94.646	ENSMODG00000025096	-	99	93.296	Monodelphis_domestica
ENSPTRG00000021274	PRPF4	100	94.656	ENSMODG00000004444	-	100	94.837	Monodelphis_domestica
ENSPTRG00000021274	PRPF4	96	76.587	ENSMALG00000013624	prpf4	99	76.587	Monopterus_albus
ENSPTRG00000021274	PRPF4	100	98.851	MGP_CAROLIEiJ_G0026078	Prpf4	100	99.040	Mus_caroli
ENSPTRG00000021274	PRPF4	100	98.851	ENSMUSG00000066148	Prpf4	100	99.040	Mus_musculus
ENSPTRG00000021274	PRPF4	100	98.659	MGP_PahariEiJ_G0028413	Prpf4	100	98.848	Mus_pahari
ENSPTRG00000021274	PRPF4	100	98.851	MGP_SPRETEiJ_G0027042	Prpf4	100	99.040	Mus_spretus
ENSPTRG00000021274	PRPF4	100	99.234	ENSMPUG00000007883	PRPF4	100	99.424	Mustela_putorius_furo
ENSPTRG00000021274	PRPF4	100	96.935	ENSMLUG00000008626	-	99	96.415	Myotis_lucifugus
ENSPTRG00000021274	PRPF4	100	98.851	ENSMLUG00000015309	-	99	98.311	Myotis_lucifugus
ENSPTRG00000021274	PRPF4	100	93.678	ENSNGAG00000000468	Prpf4	100	93.858	Nannospalax_galili
ENSPTRG00000021274	PRPF4	96	77.183	ENSNBRG00000007972	prpf4	99	77.183	Neolamprologus_brichardi
ENSPTRG00000021274	PRPF4	100	99.425	ENSNLEG00000016647	PRPF4	100	99.616	Nomascus_leucogenys
ENSPTRG00000021274	PRPF4	98	95.303	ENSMEUG00000013256	PRPF4	100	95.331	Notamacropus_eugenii
ENSPTRG00000021274	PRPF4	100	98.851	ENSOPRG00000005302	PRPF4	100	98.851	Ochotona_princeps
ENSPTRG00000021274	PRPF4	100	99.042	ENSODEG00000018147	PRPF4	100	99.232	Octodon_degus
ENSPTRG00000021274	PRPF4	99	75.096	ENSONIG00000012671	prpf4	99	76.984	Oreochromis_niloticus
ENSPTRG00000021274	PRPF4	100	99.234	ENSOCUG00000005046	PRPF4	100	99.424	Oryctolagus_cuniculus
ENSPTRG00000021274	PRPF4	96	74.900	ENSORLG00000019641	prpf4	99	74.900	Oryzias_latipes
ENSPTRG00000021274	PRPF4	96	74.900	ENSORLG00020019438	prpf4	99	74.900	Oryzias_latipes_hni
ENSPTRG00000021274	PRPF4	96	74.737	ENSOMEG00000020941	prpf4	99	74.737	Oryzias_melastigma
ENSPTRG00000021274	PRPF4	100	94.253	ENSOGAG00000007802	PRPF4	99	93.421	Otolemur_garnettii
ENSPTRG00000021274	PRPF4	100	98.851	ENSOARG00000006319	PRPF4	99	97.579	Ovis_aries
ENSPTRG00000021274	PRPF4	100	100.000	ENSPPAG00000041797	PRPF4	100	100.000	Pan_paniscus
ENSPTRG00000021274	PRPF4	100	99.425	ENSPPRG00000014360	PRPF4	100	99.616	Panthera_pardus
ENSPTRG00000021274	PRPF4	100	99.425	ENSPTIG00000009574	PRPF4	100	99.616	Panthera_tigris_altaica
ENSPTRG00000021274	PRPF4	100	98.851	ENSPANG00000025776	PRPF4	98	98.876	Papio_anubis
ENSPTRG00000021274	PRPF4	97	81.386	ENSPKIG00000017259	prpf4	99	81.386	Paramormyrops_kingsleyae
ENSPTRG00000021274	PRPF4	98	90.856	ENSPSIG00000010713	PRPF4	97	86.364	Pelodiscus_sinensis
ENSPTRG00000021274	PRPF4	99	58.532	ENSPMGG00000000997	prpf4	99	58.608	Periophthalmus_magnuspinnatus
ENSPTRG00000021274	PRPF4	100	99.042	ENSPEMG00000024115	Prpf4	100	99.232	Peromyscus_maniculatus_bairdii
ENSPTRG00000021274	PRPF4	98	95.303	ENSPCIG00000003821	PRPF4	99	95.331	Phascolarctos_cinereus
ENSPTRG00000021274	PRPF4	96	70.217	ENSPFOG00000013524	prpf4	98	73.292	Poecilia_formosa
ENSPTRG00000021274	PRPF4	84	70.118	ENSPLAG00000011620	prpf4	96	72.360	Poecilia_latipinna
ENSPTRG00000021274	PRPF4	91	74.398	ENSPMEG00000006813	prpf4	98	74.398	Poecilia_mexicana
ENSPTRG00000021274	PRPF4	98	99.027	ENSPCAG00000002561	PRPF4	100	99.027	Procavia_capensis
ENSPTRG00000021274	PRPF4	100	98.851	ENSPCOG00000011975	PRPF4	100	99.040	Propithecus_coquereli
ENSPTRG00000021274	PRPF4	100	95.594	ENSPVAG00000004708	PRPF4	100	95.594	Pteropus_vampyrus
ENSPTRG00000021274	PRPF4	96	76.984	ENSPNYG00000008013	prpf4	99	76.984	Pundamilia_nyererei
ENSPTRG00000021274	PRPF4	97	80.594	ENSPNAG00000000697	prpf4	99	80.594	Pygocentrus_nattereri
ENSPTRG00000021274	PRPF4	100	98.659	ENSRNOG00000014777	Prpf4	100	98.848	Rattus_norvegicus
ENSPTRG00000021274	PRPF4	100	99.234	ENSRBIG00000040221	PRPF4	100	99.424	Rhinopithecus_bieti
ENSPTRG00000021274	PRPF4	100	99.234	ENSRROG00000040240	PRPF4	100	99.424	Rhinopithecus_roxellana
ENSPTRG00000021274	PRPF4	100	95.229	ENSSHAG00000017658	PRPF4	100	95.411	Sarcophilus_harrisii
ENSPTRG00000021274	PRPF4	97	82.178	ENSSFOG00015008963	prpf4	99	82.178	Scleropages_formosus
ENSPTRG00000021274	PRPF4	96	75.595	ENSSMAG00000008889	prpf4	99	75.595	Scophthalmus_maximus
ENSPTRG00000021274	PRPF4	96	73.506	ENSSDUG00000022083	prpf4	98	73.705	Seriola_dumerili
ENSPTRG00000021274	PRPF4	96	73.705	ENSSLDG00000008115	prpf4	98	73.904	Seriola_lalandi_dorsalis
ENSPTRG00000021274	PRPF4	100	90.421	ENSSPUG00000015582	PRPF4	100	90.787	Sphenodon_punctatus
ENSPTRG00000021274	PRPF4	96	71.203	ENSSPAG00000011286	prpf4	99	71.203	Stegastes_partitus
ENSPTRG00000021274	PRPF4	100	99.425	ENSSSCG00000024648	PRPF4	100	99.616	Sus_scrofa
ENSPTRG00000021274	PRPF4	94	90.593	ENSTGUG00000002623	PRPF4	100	90.593	Taeniopygia_guttata
ENSPTRG00000021274	PRPF4	97	75.494	ENSTRUG00000008853	prpf4	99	75.494	Takifugu_rubripes
ENSPTRG00000021274	PRPF4	97	75.050	ENSTNIG00000013250	prpf4	99	75.050	Tetraodon_nigroviridis
ENSPTRG00000021274	PRPF4	100	90.613	ENSTBEG00000000821	PRPF4	100	90.613	Tupaia_belangeri
ENSPTRG00000021274	PRPF4	82	98.993	ENSTTRG00000003246	PRPF4	85	98.993	Tursiops_truncatus
ENSPTRG00000021274	PRPF4	64	96.418	ENSUAMG00000018288	PRPF4	90	96.707	Ursus_americanus
ENSPTRG00000021274	PRPF4	100	98.467	ENSUMAG00000019375	PRPF4	100	98.656	Ursus_maritimus
ENSPTRG00000021274	PRPF4	100	99.234	ENSVPAG00000005281	PRPF4	100	99.234	Vicugna_pacos
ENSPTRG00000021274	PRPF4	100	98.099	ENSVVUG00000002476	PRPF4	100	98.286	Vulpes_vulpes
ENSPTRG00000021274	PRPF4	69	58.056	ENSXCOG00000006101	prpf4	93	59.653	Xiphophorus_couchianus
ENSPTRG00000021274	PRPF4	87	64.629	ENSXMAG00000002750	prpf4	98	65.606	Xiphophorus_maculatus