EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPTRG00000021495 (Gene tree)
Gene ID: 464815
Gene Symbol: SETX
Alias: -
Full Name: senataxin
Gene Type: protein_coding
Species: Pan_troglodytes
Status: putative
Strand: Minus strand
Length: 104618 bases
Position: chr9:110491957-110596574
Accession: 4861
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTRP00000079377	UvrD-helicase	PF00580.21	3.1e-08	1	1
ENSPTRP00000043450	UvrD-helicase	PF00580.21	0.0001	1	1
ENSPTRP00000079377	ResIII	PF04851.15	4.5e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTRT00000042150	-	10790	XM_009457565	ENSPTRP00000043450	2668 (aa)	XP_009455840	H2R263
ENSPTRT00000081613	-	2544	-	ENSPTRP00000079377	847 (aa)	-	A0A2I3SQR4

Gene Model

Click here to download ENSPTRG00000021495's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000021495's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTRG00000021495	SETX	100	98.282	ENSG00000107290	SETX	100	98.282	Homo_sapiens
ENSPTRG00000021495	SETX	77	46.257	ENSAMXG00000014406	-	85	42.540	Astyanax_mexicanus
ENSPTRG00000021495	SETX	100	88.400	ENSCJAG00000018245	SETX	100	88.549	Callithrix_jacchus
ENSPTRG00000021495	SETX	93	81.795	ENSCAFG00020024489	SETX	100	81.490	Canis_lupus_dingo
ENSPTRG00000021495	SETX	99	79.787	ENSTSYG00000030808	-	98	79.787	Carlito_syrichta
ENSPTRG00000021495	SETX	94	81.179	ENSCPOG00000001492	SETX	100	71.216	Cavia_porcellus
ENSPTRG00000021495	SETX	98	78.802	ENSCLAG00000012582	SETX	99	73.670	Chinchilla_lanigera
ENSPTRG00000021495	SETX	92	74.107	ENSETEG00000008111	-	73	91.898	Echinops_telfairi
ENSPTRG00000021495	SETX	91	82.209	ENSECAG00000012019	SETX	99	82.209	Equus_caballus
ENSPTRG00000021495	SETX	80	43.443	ENSELUG00000022536	-	83	43.478	Esox_lucius
ENSPTRG00000021495	SETX	100	77.303	ENSFCAG00000007102	SETX	100	77.229	Felis_catus
ENSPTRG00000021495	SETX	78	72.213	ENSFALG00000001464	SETX	86	72.213	Ficedula_albicollis
ENSPTRG00000021495	SETX	100	98.229	ENSGGOG00000027664	SETX	100	98.229	Gorilla_gorilla
ENSPTRG00000021495	SETX	77	46.596	ENSIPUG00000006685	setx	77	44.918	Ictalurus_punctatus
ENSPTRG00000021495	SETX	83	55.927	ENSLOCG00000004264	SETX	91	56.093	Lepisosteus_oculatus
ENSPTRG00000021495	SETX	69	92.599	ENSLAFG00000017327	-	100	80.342	Loxodonta_africana
ENSPTRG00000021495	SETX	93	79.161	ENSMOCG00000000848	Setx	99	67.569	Microtus_ochrogaster
ENSPTRG00000021495	SETX	93	82.211	MGP_PahariEiJ_G0024821	Setx	100	71.662	Mus_pahari
ENSPTRG00000021495	SETX	98	93.773	ENSNLEG00000012839	SETX	100	93.773	Nomascus_leucogenys
ENSPTRG00000021495	SETX	99	77.176	ENSOCUG00000005616	SETX	96	70.704	Oryctolagus_cuniculus
ENSPTRG00000021495	SETX	94	87.060	ENSOGAG00000013387	SETX	99	80.052	Otolemur_garnettii
ENSPTRG00000021495	SETX	100	99.882	ENSPPAG00000004108	SETX	100	99.882	Pan_paniscus
ENSPTRG00000021495	SETX	99	79.113	ENSPPRG00000012867	SETX	100	77.192	Panthera_pardus
ENSPTRG00000021495	SETX	100	77.089	ENSPTIG00000021101	SETX	100	77.014	Panthera_tigris_altaica
ENSPTRG00000021495	SETX	77	49.587	ENSPKIG00000025162	SETX	84	49.917	Paramormyrops_kingsleyae
ENSPTRG00000021495	SETX	59	93.103	ENSSARG00000002336	-	63	93.103	Sorex_araneus
ENSPTRG00000021495	SETX	99	56.548	ENSSPUG00000016332	SETX	91	70.335	Sphenodon_punctatus
ENSPTRG00000021495	SETX	99	75.566	ENSSSCG00000005724	SETX	99	75.641	Sus_scrofa
ENSPTRG00000021495	SETX	79	71.880	ENSTGUG00000005117	SETX	86	72.000	Taeniopygia_guttata
ENSPTRG00000021495	SETX	99	84.852	ENSUMAG00000016729	SETX	98	84.852	Ursus_maritimus
ENSPTRG00000021495	SETX	79	63.289	ENSXETG00000006254	setx	95	63.576	Xenopus_tropicalis