EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPTRG00000022047 (Gene tree)
Gene ID: 449625
Gene Symbol: ATRX
Alias: -
Full Name: ATRX%2C chromatin remodeler
Gene Type: protein_coding
Species: Pan_troglodytes
Status: putative
Strand: Minus strand
Length: 300072 bases
Position: chrX:76990042-77290113
Accession: 53808
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTRP00000062389	ResIII	PF04851.15	1.5e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTRT00000062063	-	7365	-	ENSPTRP00000054614	2454 (aa)	-	H2RAW2
ENSPTRT00000078268	-	7401	-	ENSPTRP00000066143	2466 (aa)	-	A0A2I3RP93
ENSPTRT00000091943	-	2979	-	ENSPTRP00000062389	992 (aa)	-	A0A2I3RDC1
ENSPTRT00000082274	-	7461	-	ENSPTRP00000081604	2486 (aa)	-	A0A2I3SX79
ENSPTRT00000111037	-	7479	-	ENSPTRP00000087577	2492 (aa)	-	Q7YQM4

Gene Model

Click here to download ENSPTRG00000022047's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000022047's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPTRG00000022047	ATRX	52	38.068	ENSPTRG00000002778	HELLS	56	38.068
ENSPTRG00000022047	ATRX	50	38.916	ENSPTRG00000000689	RAD54L	61	38.916
ENSPTRG00000022047	ATRX	55	31.949	ENSPTRG00000020427	-	59	41.259
ENSPTRG00000022047	ATRX	51	38.235	ENSPTRG00000048689	ERCC6L2	65	38.235

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTRG00000022047	ATRX	99	96.349	ENSCANG00000031935	ATRX	99	96.349	Colobus_angolensis_palliatus
ENSPTRG00000022047	ATRX	85	44.948	FBgn0039338	XNP	69	47.193	Drosophila_melanogaster
ENSPTRG00000022047	ATRX	99	100.000	ENSGGOG00000024999	ATRX	99	100.000	Gorilla_gorilla
ENSPTRG00000022047	ATRX	99	99.696	ENSMFAG00000031719	ATRX	99	99.696	Macaca_fascicularis
ENSPTRG00000022047	ATRX	99	99.696	ENSMNEG00000033171	ATRX	99	99.696	Macaca_nemestrina
ENSPTRG00000022047	ATRX	99	99.797	ENSMLEG00000036012	ATRX	99	99.797	Mandrillus_leucophaeus
ENSPTRG00000022047	ATRX	99	99.899	ENSNLEG00000001144	ATRX	99	99.899	Nomascus_leucogenys
ENSPTRG00000022047	ATRX	100	99.899	ENSPPAG00000043806	ATRX	100	99.899	Pan_paniscus
ENSPTRG00000022047	ATRX	99	99.696	ENSPANG00000024984	ATRX	99	99.696	Papio_anubis
ENSPTRG00000022047	ATRX	100	95.105	ENSPEMG00000022358	-	98	95.504	Peromyscus_maniculatus_bairdii