EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPTRG00000022090 (Gene tree)
Gene ID: 473699
Gene Symbol: CSTF2
Alias: -
Full Name: cleavage stimulation factor subunit 2
Gene Type: protein_coding
Species: Pan_troglodytes
Status: putative
Strand: Plus strand
Length: 24443 bases
Position: chrX:100456564-100481006
Accession: 10175
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTRP00000084076	RRM_1	PF00076.22	2.2e-25	1	1
ENSPTRP00000038004	RRM_1	PF00076.22	2.7e-25	1	1
ENSPTRP00000063788	RRM_1	PF00076.22	2.8e-25	1	1
ENSPTRP00000067955	RRM_1	PF00076.22	2.9e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTRT00000103529	-	5947	XM_009439331	ENSPTRP00000067955	597 (aa)	XP_009437606	A0A2I3RTC1
ENSPTRT00000083464	-	1659	-	ENSPTRP00000084076	552 (aa)	-	A0A2I3T4C2
ENSPTRT00000098930	-	5891	XM_003317547	ENSPTRP00000063788	577 (aa)	XP_003317595	K7CVU3
ENSPTRT00000041140	-	1719	-	ENSPTRP00000038004	572 (aa)	-	H2QYW2

Gene Model

Click here to download ENSPTRG00000022090's gene model file

Pathways

Pathway ID	Pathway Name	Source
ptr03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000022090's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPTRG00000022090	CSTF2	56	64.671	ENSPTRG00000043097	-	96	65.269

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTRG00000022090	CSTF2	100	100.000	ENSG00000101811	CSTF2	100	100.000	Homo_sapiens
ENSPTRG00000022090	CSTF2	99	61.239	ENSAPOG00000005630	cstf2	97	61.661	Acanthochromis_polyacanthus
ENSPTRG00000022090	CSTF2	100	95.861	ENSAMEG00000002082	CSTF2	100	95.861	Ailuropoda_melanoleuca
ENSPTRG00000022090	CSTF2	87	82.231	ENSACIG00000012852	cstf2	96	59.964	Amphilophus_citrinellus
ENSPTRG00000022090	CSTF2	99	60.568	ENSAOCG00000020905	cstf2	97	61.837	Amphiprion_ocellaris
ENSPTRG00000022090	CSTF2	99	60.568	ENSAPEG00000006526	cstf2	97	61.837	Amphiprion_percula
ENSPTRG00000022090	CSTF2	87	80.247	ENSATEG00000018186	cstf2	97	59.649	Anabas_testudineus
ENSPTRG00000022090	CSTF2	97	78.947	ENSAPLG00000007255	CSTF2	98	78.487	Anas_platyrhynchos
ENSPTRG00000022090	CSTF2	100	98.913	ENSANAG00000022342	CSTF2	100	98.913	Aotus_nancymaae
ENSPTRG00000022090	CSTF2	99	60.963	ENSACLG00000000779	cstf2	93	62.366	Astatotilapia_calliptera
ENSPTRG00000022090	CSTF2	72	98.413	ENSAMXG00000021477	cstf2	96	98.413	Astyanax_mexicanus
ENSPTRG00000022090	CSTF2	100	95.979	ENSBTAG00000003547	CSTF2	100	95.979	Bos_taurus
ENSPTRG00000022090	CSTF2	100	98.995	ENSCJAG00000004422	CSTF2	100	98.995	Callithrix_jacchus
ENSPTRG00000022090	CSTF2	100	96.360	ENSCAFG00000017551	CSTF2	100	96.360	Canis_familiaris
ENSPTRG00000022090	CSTF2	100	96.482	ENSCAFG00020007619	CSTF2	100	96.482	Canis_lupus_dingo
ENSPTRG00000022090	CSTF2	100	96.329	ENSCHIG00000016994	CSTF2	100	96.329	Capra_hircus
ENSPTRG00000022090	CSTF2	100	98.325	ENSTSYG00000006529	CSTF2	100	98.325	Carlito_syrichta
ENSPTRG00000022090	CSTF2	100	96.147	ENSCPOG00000015255	CSTF2	100	96.147	Cavia_porcellus
ENSPTRG00000022090	CSTF2	100	99.275	ENSCCAG00000032975	CSTF2	100	99.275	Cebus_capucinus
ENSPTRG00000022090	CSTF2	100	99.497	ENSCATG00000022835	CSTF2	100	99.497	Cercocebus_atys
ENSPTRG00000022090	CSTF2	100	95.980	ENSCLAG00000001904	CSTF2	100	95.980	Chinchilla_lanigera
ENSPTRG00000022090	CSTF2	100	99.665	ENSCSAG00000010360	CSTF2	100	99.665	Chlorocebus_sabaeus
ENSPTRG00000022090	CSTF2	70	100.000	ENSCHOG00000012803	CSTF2	75	100.000	Choloepus_hoffmanni
ENSPTRG00000022090	CSTF2	100	76.672	ENSCPBG00000014293	CSTF2	100	76.425	Chrysemys_picta_bellii
ENSPTRG00000022090	CSTF2	100	99.665	ENSCANG00000030612	CSTF2	100	99.665	Colobus_angolensis_palliatus
ENSPTRG00000022090	CSTF2	100	92.931	ENSCGRG00001023023	Cstf2	100	92.931	Cricetulus_griseus_chok1gshd
ENSPTRG00000022090	CSTF2	100	89.828	ENSCGRG00000003897	Cstf2	100	89.828	Cricetulus_griseus_crigri
ENSPTRG00000022090	CSTF2	87	82.988	ENSCVAG00000005731	cstf2	96	62.278	Cyprinodon_variegatus
ENSPTRG00000022090	CSTF2	72	98.182	ENSDARG00000090788	cstf2	93	92.188	Danio_rerio
ENSPTRG00000022090	CSTF2	100	92.746	ENSDORG00000007195	Cstf2	100	92.746	Dipodomys_ordii
ENSPTRG00000022090	CSTF2	73	93.243	ENSETEG00000004931	CSTF2	68	93.243	Echinops_telfairi
ENSPTRG00000022090	CSTF2	100	96.985	ENSEASG00005001216	CSTF2	100	96.985	Equus_asinus_asinus
ENSPTRG00000022090	CSTF2	100	96.985	ENSECAG00000009325	CSTF2	100	96.985	Equus_caballus
ENSPTRG00000022090	CSTF2	100	96.817	ENSFCAG00000007000	CSTF2	100	96.817	Felis_catus
ENSPTRG00000022090	CSTF2	92	77.837	ENSFALG00000003859	CSTF2	100	78.014	Ficedula_albicollis
ENSPTRG00000022090	CSTF2	100	96.360	ENSFDAG00000002416	CSTF2	100	96.360	Fukomys_damarensis
ENSPTRG00000022090	CSTF2	87	81.148	ENSFHEG00000017065	cstf2	93	62.679	Fundulus_heteroclitus
ENSPTRG00000022090	CSTF2	99	57.011	ENSGMOG00000005145	cstf2	99	59.002	Gadus_morhua
ENSPTRG00000022090	CSTF2	100	79.346	ENSGALG00000006760	CSTF2	100	85.667	Gallus_gallus
ENSPTRG00000022090	CSTF2	99	59.928	ENSGAFG00000020027	cstf2	96	61.456	Gambusia_affinis
ENSPTRG00000022090	CSTF2	99	56.574	ENSGACG00000017326	cstf2	94	81.633	Gasterosteus_aculeatus
ENSPTRG00000022090	CSTF2	100	78.628	ENSGAGG00000006037	CSTF2	100	78.748	Gopherus_agassizii
ENSPTRG00000022090	CSTF2	100	100.000	ENSGGOG00000022267	CSTF2	100	100.000	Gorilla_gorilla
ENSPTRG00000022090	CSTF2	99	60.893	ENSHBUG00000016183	cstf2	93	62.298	Haplochromis_burtoni
ENSPTRG00000022090	CSTF2	100	97.054	ENSHGLG00000000659	-	100	97.054	Heterocephalus_glaber_female
ENSPTRG00000022090	CSTF2	100	82.322	ENSHGLG00000013455	-	100	82.322	Heterocephalus_glaber_female
ENSPTRG00000022090	CSTF2	100	82.496	ENSHGLG00100015391	-	100	82.496	Heterocephalus_glaber_male
ENSPTRG00000022090	CSTF2	100	97.054	ENSHGLG00100001130	-	100	97.054	Heterocephalus_glaber_male
ENSPTRG00000022090	CSTF2	99	62.612	ENSHCOG00000005157	cstf2	97	63.148	Hippocampus_comes
ENSPTRG00000022090	CSTF2	100	60.137	ENSIPUG00000017839	cstf2	99	61.092	Ictalurus_punctatus
ENSPTRG00000022090	CSTF2	100	96.187	ENSSTOG00000023445	CSTF2	100	96.187	Ictidomys_tridecemlineatus
ENSPTRG00000022090	CSTF2	100	94.801	ENSJJAG00000020507	Cstf2	100	94.801	Jaculus_jaculus
ENSPTRG00000022090	CSTF2	99	59.347	ENSKMAG00000001068	cstf2	96	62.319	Kryptolebias_marmoratus
ENSPTRG00000022090	CSTF2	67	94.915	ENSLBEG00000028720	cstf2	87	89.062	Labrus_bergylta
ENSPTRG00000022090	CSTF2	99	68.852	ENSLACG00000015927	CSTF2	99	67.805	Latimeria_chalumnae
ENSPTRG00000022090	CSTF2	98	77.778	ENSLOCG00000015300	cstf2	93	65.060	Lepisosteus_oculatus
ENSPTRG00000022090	CSTF2	100	92.295	ENSLAFG00000000474	CSTF2	100	92.295	Loxodonta_africana
ENSPTRG00000022090	CSTF2	100	99.665	ENSMFAG00000043888	CSTF2	100	99.665	Macaca_fascicularis
ENSPTRG00000022090	CSTF2	100	99.638	ENSMMUG00000013008	CSTF2	100	99.638	Macaca_mulatta
ENSPTRG00000022090	CSTF2	100	99.665	ENSMNEG00000041824	CSTF2	100	99.665	Macaca_nemestrina
ENSPTRG00000022090	CSTF2	100	99.665	ENSMLEG00000036870	CSTF2	100	99.665	Mandrillus_leucophaeus
ENSPTRG00000022090	CSTF2	82	79.399	ENSMAMG00000020364	cstf2	96	59.963	Mastacembelus_armatus
ENSPTRG00000022090	CSTF2	99	60.963	ENSMZEG00005007200	cstf2	96	62.366	Maylandia_zebra
ENSPTRG00000022090	CSTF2	93	69.631	ENSMGAG00000004139	CSTF2	100	85.259	Meleagris_gallopavo
ENSPTRG00000022090	CSTF2	100	93.276	ENSMAUG00000000965	Cstf2	100	93.276	Mesocricetus_auratus
ENSPTRG00000022090	CSTF2	100	96.817	ENSMICG00000014121	CSTF2	100	96.817	Microcebus_murinus
ENSPTRG00000022090	CSTF2	100	92.522	ENSMOCG00000008081	Cstf2	100	92.522	Microtus_ochrogaster
ENSPTRG00000022090	CSTF2	84	92.308	ENSMMOG00000000538	cstf2	97	55.793	Mola_mola
ENSPTRG00000022090	CSTF2	100	80.066	ENSMODG00000011785	CSTF2	100	82.178	Monodelphis_domestica
ENSPTRG00000022090	CSTF2	100	93.276	MGP_CAROLIEiJ_G0033383	Cstf2	100	93.276	Mus_caroli
ENSPTRG00000022090	CSTF2	100	93.276	ENSMUSG00000031256	Cstf2	100	93.276	Mus_musculus
ENSPTRG00000022090	CSTF2	100	93.264	MGP_PahariEiJ_G0031923	Cstf2	100	93.437	Mus_pahari
ENSPTRG00000022090	CSTF2	100	93.276	MGP_SPRETEiJ_G0034548	Cstf2	100	93.276	Mus_spretus
ENSPTRG00000022090	CSTF2	100	91.111	ENSMPUG00000002339	CSTF2	100	91.111	Mustela_putorius_furo
ENSPTRG00000022090	CSTF2	100	89.348	ENSMLUG00000004598	CSTF2	98	89.348	Myotis_lucifugus
ENSPTRG00000022090	CSTF2	100	95.164	ENSNGAG00000021985	Cstf2	100	95.337	Nannospalax_galili
ENSPTRG00000022090	CSTF2	92	63.054	ENSNBRG00000021694	cstf2	100	58.473	Neolamprologus_brichardi
ENSPTRG00000022090	CSTF2	100	99.665	ENSNLEG00000007510	CSTF2	100	99.665	Nomascus_leucogenys
ENSPTRG00000022090	CSTF2	91	80.230	ENSMEUG00000014025	-	100	81.766	Notamacropus_eugenii
ENSPTRG00000022090	CSTF2	100	82.692	ENSMEUG00000011186	-	100	84.266	Notamacropus_eugenii
ENSPTRG00000022090	CSTF2	100	78.497	ENSMEUG00000007875	-	100	80.070	Notamacropus_eugenii
ENSPTRG00000022090	CSTF2	90	80.995	ENSOPRG00000003106	CSTF2	87	80.995	Ochotona_princeps
ENSPTRG00000022090	CSTF2	100	95.494	ENSODEG00000002059	CSTF2	100	95.494	Octodon_degus
ENSPTRG00000022090	CSTF2	93	79.600	ENSONIG00000002631	cstf2	87	76.173	Oreochromis_niloticus
ENSPTRG00000022090	CSTF2	88	98.214	ENSOANG00000004208	CSTF2	87	90.000	Ornithorhynchus_anatinus
ENSPTRG00000022090	CSTF2	100	95.321	ENSOCUG00000010468	CSTF2	100	95.321	Oryctolagus_cuniculus
ENSPTRG00000022090	CSTF2	86	80.498	ENSORLG00000001380	cstf2	97	59.358	Oryzias_latipes
ENSPTRG00000022090	CSTF2	86	80.913	ENSORLG00020021917	cstf2	97	59.715	Oryzias_latipes_hni
ENSPTRG00000022090	CSTF2	86	80.498	ENSORLG00015011996	cstf2	97	59.358	Oryzias_latipes_hsok
ENSPTRG00000022090	CSTF2	83	81.328	ENSOMEG00000015507	cstf2	97	60.676	Oryzias_melastigma
ENSPTRG00000022090	CSTF2	100	91.256	ENSOGAG00000011192	CSTF2	100	90.143	Otolemur_garnettii
ENSPTRG00000022090	CSTF2	100	96.329	ENSOARG00000001022	CSTF2	100	96.329	Ovis_aries
ENSPTRG00000022090	CSTF2	100	100.000	ENSPPAG00000031804	CSTF2	100	100.000	Pan_paniscus
ENSPTRG00000022090	CSTF2	100	96.985	ENSPPRG00000022492	CSTF2	100	96.985	Panthera_pardus
ENSPTRG00000022090	CSTF2	100	96.650	ENSPTIG00000009922	CSTF2	100	96.650	Panthera_tigris_altaica
ENSPTRG00000022090	CSTF2	100	99.665	ENSPANG00000002303	CSTF2	100	99.665	Papio_anubis
ENSPTRG00000022090	CSTF2	99	63.240	ENSPKIG00000005033	cstf2	97	61.431	Paramormyrops_kingsleyae
ENSPTRG00000022090	CSTF2	99	58.392	ENSPMGG00000006534	cstf2	97	59.441	Periophthalmus_magnuspinnatus
ENSPTRG00000022090	CSTF2	100	92.241	ENSPEMG00000019415	Cstf2	100	92.241	Peromyscus_maniculatus_bairdii
ENSPTRG00000022090	CSTF2	100	81.117	ENSPCIG00000002989	CSTF2	100	82.759	Phascolarctos_cinereus
ENSPTRG00000022090	CSTF2	99	57.168	ENSPLAG00000011176	cstf2	96	59.722	Poecilia_latipinna
ENSPTRG00000022090	CSTF2	99	57.168	ENSPMEG00000017743	cstf2	96	59.549	Poecilia_mexicana
ENSPTRG00000022090	CSTF2	57	73.750	ENSPREG00000011481	cstf2	97	61.511	Poecilia_reticulata
ENSPTRG00000022090	CSTF2	100	99.832	ENSPPYG00000020541	CSTF2	100	99.832	Pongo_abelii
ENSPTRG00000022090	CSTF2	100	98.370	ENSPCOG00000027744	CSTF2	100	98.370	Propithecus_coquereli
ENSPTRG00000022090	CSTF2	97	80.790	ENSPVAG00000008342	CSTF2	100	80.790	Pteropus_vampyrus
ENSPTRG00000022090	CSTF2	59	91.781	ENSPNYG00000010852	cstf2	94	91.781	Pundamilia_nyererei
ENSPTRG00000022090	CSTF2	99	61.872	ENSPNAG00000018887	cstf2	97	62.218	Pygocentrus_nattereri
ENSPTRG00000022090	CSTF2	100	92.870	ENSRNOG00000048025	Cstf2	100	92.870	Rattus_norvegicus
ENSPTRG00000022090	CSTF2	100	97.920	ENSRBIG00000030745	CSTF2	100	97.920	Rhinopithecus_bieti
ENSPTRG00000022090	CSTF2	100	99.665	ENSRROG00000045042	CSTF2	100	99.665	Rhinopithecus_roxellana
ENSPTRG00000022090	CSTF2	100	99.094	ENSSBOG00000021649	CSTF2	100	99.094	Saimiri_boliviensis_boliviensis
ENSPTRG00000022090	CSTF2	98	100.000	ENSSHAG00000003681	CSTF2	92	83.305	Sarcophilus_harrisii
ENSPTRG00000022090	CSTF2	99	64.060	ENSSFOG00015006348	cstf2	98	63.471	Scleropages_formosus
ENSPTRG00000022090	CSTF2	99	58.633	ENSSMAG00000013463	cstf2	97	59.863	Scophthalmus_maximus
ENSPTRG00000022090	CSTF2	100	65.402	ENSSPUG00000005288	-	98	80.720	Sphenodon_punctatus
ENSPTRG00000022090	CSTF2	100	95.645	ENSSSCG00000012486	CSTF2	100	96.970	Sus_scrofa
ENSPTRG00000022090	CSTF2	100	79.422	ENSTGUG00000002253	CSTF2	100	79.592	Taeniopygia_guttata
ENSPTRG00000022090	CSTF2	99	59.589	ENSTNIG00000016860	cstf2	99	60.103	Tetraodon_nigroviridis
ENSPTRG00000022090	CSTF2	55	100.000	ENSTBEG00000010029	-	69	100.000	Tupaia_belangeri
ENSPTRG00000022090	CSTF2	100	96.880	ENSTTRG00000013556	CSTF2	100	96.880	Tursiops_truncatus
ENSPTRG00000022090	CSTF2	100	96.346	ENSUAMG00000026605	CSTF2	100	96.346	Ursus_americanus
ENSPTRG00000022090	CSTF2	100	89.685	ENSUMAG00000012417	CSTF2	100	98.270	Ursus_maritimus
ENSPTRG00000022090	CSTF2	73	96.210	ENSVPAG00000006466	CSTF2	72	96.210	Vicugna_pacos
ENSPTRG00000022090	CSTF2	100	96.534	ENSVVUG00000004717	CSTF2	100	96.534	Vulpes_vulpes
ENSPTRG00000022090	CSTF2	82	92.188	ENSXETG00000009642	cstf2	100	66.724	Xenopus_tropicalis
ENSPTRG00000022090	CSTF2	88	76.829	ENSXCOG00000016436	cstf2	84	96.970	Xiphophorus_couchianus
ENSPTRG00000022090	CSTF2	58	71.171	ENSXMAG00000013524	cstf2	97	57.591	Xiphophorus_maculatus