EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPTRG00000022548 (Gene tree)
Gene ID: -
Gene Symbol: XRCC6
Alias: -
Full Name: X-ray repair cross complementing 6
Gene Type: protein_coding
Species: Pan_troglodytes
Status: putative
Strand: Plus strand
Length: 41110 bases
Position: chr22:28282886-28323995
Accession: 12946
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTRP00000066389	SAP	PF02037.27	3.6e-09	1	1
ENSPTRP00000089327	SAP	PF02037.27	4.3e-09	1	1
ENSPTRP00000043206	SAP	PF02037.27	4.7e-09	1	1
ENSPTRP00000073204	SAP	PF02037.27	4.9e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTRT00000090721	-	1677	-	ENSPTRP00000089327	558 (aa)	-	A0A2I3TK96
ENSPTRT00000100598	-	2121	XM_016939271	ENSPTRP00000073204	609 (aa)	XP_016794760	G2HER7
ENSPTRT00000107546	-	1680	-	ENSPTRP00000066389	559 (aa)	-	A0A2J8LN32
ENSPTRT00000050424	-	1758	-	ENSPTRP00000043206	585 (aa)	-	H2R209

Gene Model

Click here to download ENSPTRG00000022548's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000022548's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPTRG00000022548	XRCC6	100	100.000	ENSPTRG00000045824	XRCC6	100	100.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTRG00000022548	XRCC6	100	100.000	ENSG00000196419	XRCC6	100	100.000	Homo_sapiens
ENSPTRG00000022548	XRCC6	99	56.414	ENSAPOG00000012704	xrcc6	99	56.414	Acanthochromis_polyacanthus
ENSPTRG00000022548	XRCC6	99	56.086	ENSACIG00000021277	xrcc6	99	56.086	Amphilophus_citrinellus
ENSPTRG00000022548	XRCC6	98	56.379	ENSAOCG00000021344	xrcc6	99	55.410	Amphiprion_ocellaris
ENSPTRG00000022548	XRCC6	98	56.724	ENSAPEG00000020712	xrcc6	99	55.738	Amphiprion_percula
ENSPTRG00000022548	XRCC6	99	56.250	ENSATEG00000007119	xrcc6	99	56.086	Anabas_testudineus
ENSPTRG00000022548	XRCC6	97	71.402	ENSAPLG00000004469	XRCC6	99	70.962	Anas_platyrhynchos
ENSPTRG00000022548	XRCC6	100	85.714	ENSANAG00000035230	-	100	85.714	Aotus_nancymaae
ENSPTRG00000022548	XRCC6	99	88.316	ENSANAG00000020017	-	91	96.535	Aotus_nancymaae
ENSPTRG00000022548	XRCC6	100	98.686	ENSANAG00000018684	XRCC6	100	98.686	Aotus_nancymaae
ENSPTRG00000022548	XRCC6	100	83.713	ENSANAG00000023445	-	100	83.713	Aotus_nancymaae
ENSPTRG00000022548	XRCC6	99	56.414	ENSACLG00000018608	xrcc6	99	56.250	Astatotilapia_calliptera
ENSPTRG00000022548	XRCC6	99	58.291	ENSAMXG00000007545	xrcc6	99	57.353	Astyanax_mexicanus
ENSPTRG00000022548	XRCC6	100	98.522	ENSCJAG00000045512	XRCC6	100	98.522	Callithrix_jacchus
ENSPTRG00000022548	XRCC6	99	87.608	ENSTSYG00000011348	XRCC6	99	87.007	Carlito_syrichta
ENSPTRG00000022548	XRCC6	100	80.684	ENSCCAG00000037663	-	97	78.654	Cebus_capucinus
ENSPTRG00000022548	XRCC6	100	79.310	ENSCCAG00000035711	-	100	79.310	Cebus_capucinus
ENSPTRG00000022548	XRCC6	100	92.991	ENSCCAG00000030041	-	95	92.447	Cebus_capucinus
ENSPTRG00000022548	XRCC6	90	98.976	ENSCCAG00000030468	-	100	98.438	Cebus_capucinus
ENSPTRG00000022548	XRCC6	100	99.179	ENSCATG00000042366	XRCC6	100	99.179	Cercocebus_atys
ENSPTRG00000022548	XRCC6	99	86.379	ENSCLAG00000016669	XRCC6	99	85.667	Chinchilla_lanigera
ENSPTRG00000022548	XRCC6	100	99.179	ENSCSAG00000005784	XRCC6	100	99.179	Chlorocebus_sabaeus
ENSPTRG00000022548	XRCC6	99	75.086	ENSCPBG00000020535	XRCC6	99	74.220	Chrysemys_picta_bellii
ENSPTRG00000022548	XRCC6	98	35.870	ENSCING00000000633	-	95	35.678	Ciona_intestinalis
ENSPTRG00000022548	XRCC6	100	99.179	ENSCANG00000031032	XRCC6	100	99.179	Colobus_angolensis_palliatus
ENSPTRG00000022548	XRCC6	99	77.797	ENSCGRG00001019029	Xrcc6	99	77.138	Cricetulus_griseus_chok1gshd
ENSPTRG00000022548	XRCC6	99	85.886	ENSCGRG00000001528	Xrcc6	99	84.868	Cricetulus_griseus_crigri
ENSPTRG00000022548	XRCC6	99	57.265	ENSCSEG00000020434	xrcc6	99	56.209	Cynoglossus_semilaevis
ENSPTRG00000022548	XRCC6	99	57.388	ENSCVAG00000002189	xrcc6	99	56.158	Cyprinodon_variegatus
ENSPTRG00000022548	XRCC6	99	59.863	ENSDARG00000071551	xrcc6	99	58.361	Danio_rerio
ENSPTRG00000022548	XRCC6	77	86.842	ENSETEG00000015333	-	74	86.842	Echinops_telfairi
ENSPTRG00000022548	XRCC6	99	87.047	ENSEASG00005001514	XRCC6	99	86.020	Equus_asinus_asinus
ENSPTRG00000022548	XRCC6	99	86.528	ENSECAG00000017563	XRCC6	99	86.275	Equus_caballus
ENSPTRG00000022548	XRCC6	99	55.631	ENSELUG00000020301	xrcc6	100	54.560	Esox_lucius
ENSPTRG00000022548	XRCC6	99	70.890	ENSFALG00000011908	XRCC6	97	69.771	Ficedula_albicollis
ENSPTRG00000022548	XRCC6	99	57.949	ENSFHEG00000016833	xrcc6	99	57.026	Fundulus_heteroclitus
ENSPTRG00000022548	XRCC6	99	49.228	ENSGMOG00000013524	xrcc6	99	48.768	Gadus_morhua
ENSPTRG00000022548	XRCC6	99	71.134	ENSGALG00000011932	XRCC6	99	69.558	Gallus_gallus
ENSPTRG00000022548	XRCC6	99	56.068	ENSGAFG00000008130	xrcc6	99	55.065	Gambusia_affinis
ENSPTRG00000022548	XRCC6	99	54.889	ENSGACG00000004868	xrcc6	99	54.098	Gasterosteus_aculeatus
ENSPTRG00000022548	XRCC6	99	74.914	ENSGAGG00000017518	XRCC6	99	74.056	Gopherus_agassizii
ENSPTRG00000022548	XRCC6	100	99.672	ENSGGOG00000015885	XRCC6	100	99.672	Gorilla_gorilla
ENSPTRG00000022548	XRCC6	97	57.064	ENSHBUG00000023281	xrcc6	99	56.506	Haplochromis_burtoni
ENSPTRG00000022548	XRCC6	99	85.000	ENSHGLG00000018078	XRCC6	99	84.020	Heterocephalus_glaber_female
ENSPTRG00000022548	XRCC6	99	85.000	ENSHGLG00100011264	XRCC6	99	84.020	Heterocephalus_glaber_male
ENSPTRG00000022548	XRCC6	99	53.618	ENSHCOG00000009821	xrcc6	99	53.947	Hippocampus_comes
ENSPTRG00000022548	XRCC6	99	57.265	ENSIPUG00000000767	xrcc6	96	57.265	Ictalurus_punctatus
ENSPTRG00000022548	XRCC6	99	88.812	ENSSTOG00000009490	XRCC6	99	87.993	Ictidomys_tridecemlineatus
ENSPTRG00000022548	XRCC6	99	79.002	ENSJJAG00000017136	Xrcc6	99	79.605	Jaculus_jaculus
ENSPTRG00000022548	XRCC6	99	57.045	ENSKMAG00000002141	xrcc6	99	55.993	Kryptolebias_marmoratus
ENSPTRG00000022548	XRCC6	99	56.239	ENSLBEG00000002691	xrcc6	99	55.556	Labrus_bergylta
ENSPTRG00000022548	XRCC6	90	58.824	ENSLOCG00000011533	xrcc6	99	58.824	Lepisosteus_oculatus
ENSPTRG00000022548	XRCC6	100	99.179	ENSMFAG00000003352	XRCC6	100	99.179	Macaca_fascicularis
ENSPTRG00000022548	XRCC6	100	99.179	ENSMMUG00000001856	XRCC6	100	99.179	Macaca_mulatta
ENSPTRG00000022548	XRCC6	100	99.179	ENSMNEG00000035076	XRCC6	100	99.179	Macaca_nemestrina
ENSPTRG00000022548	XRCC6	100	99.179	ENSMLEG00000019869	XRCC6	100	99.179	Mandrillus_leucophaeus
ENSPTRG00000022548	XRCC6	99	56.239	ENSMAMG00000003368	xrcc6	99	55.082	Mastacembelus_armatus
ENSPTRG00000022548	XRCC6	99	55.308	ENSMAMG00000003405	xrcc6	96	55.403	Mastacembelus_armatus
ENSPTRG00000022548	XRCC6	99	56.414	ENSMZEG00005028080	xrcc6	99	56.250	Maylandia_zebra
ENSPTRG00000022548	XRCC6	99	70.890	ENSMGAG00000012146	XRCC6	99	69.331	Meleagris_gallopavo
ENSPTRG00000022548	XRCC6	99	85.542	ENSMAUG00000017340	Xrcc6	99	84.539	Mesocricetus_auratus
ENSPTRG00000022548	XRCC6	99	85.886	ENSMOCG00000015717	Xrcc6	99	84.539	Microtus_ochrogaster
ENSPTRG00000022548	XRCC6	99	55.726	ENSMMOG00000003536	xrcc6	99	54.680	Mola_mola
ENSPTRG00000022548	XRCC6	99	57.401	ENSMALG00000013912	xrcc6	94	57.237	Monopterus_albus
ENSPTRG00000022548	XRCC6	99	78.313	MGP_CAROLIEiJ_G0020067	Xrcc6	99	77.467	Mus_caroli
ENSPTRG00000022548	XRCC6	99	84.337	ENSMUSG00000022471	Xrcc6	99	83.224	Mus_musculus
ENSPTRG00000022548	XRCC6	99	83.477	MGP_PahariEiJ_G0020069	Xrcc6	99	82.401	Mus_pahari
ENSPTRG00000022548	XRCC6	99	83.821	MGP_SPRETEiJ_G0020967	Xrcc6	99	83.821	Mus_spretus
ENSPTRG00000022548	XRCC6	99	84.165	ENSNGAG00000013750	Xrcc6	99	83.553	Nannospalax_galili
ENSPTRG00000022548	XRCC6	99	56.908	ENSNBRG00000004125	xrcc6	99	56.743	Neolamprologus_brichardi
ENSPTRG00000022548	XRCC6	99	82.931	ENSOPRG00000002386	XRCC6	99	82.931	Ochotona_princeps
ENSPTRG00000022548	XRCC6	99	83.103	ENSODEG00000015847	XRCC6	99	82.372	Octodon_degus
ENSPTRG00000022548	XRCC6	99	57.877	ENSONIG00000019715	xrcc6	99	56.908	Oreochromis_niloticus
ENSPTRG00000022548	XRCC6	74	79.612	ENSOANG00000011328	XRCC6	99	79.612	Ornithorhynchus_anatinus
ENSPTRG00000022548	XRCC6	99	87.241	ENSOCUG00000006948	XRCC6	100	86.535	Oryctolagus_cuniculus
ENSPTRG00000022548	XRCC6	99	56.261	ENSORLG00020007820	xrcc6	99	55.574	Oryzias_latipes_hni
ENSPTRG00000022548	XRCC6	99	56.089	ENSORLG00015006406	xrcc6	99	55.246	Oryzias_latipes_hsok
ENSPTRG00000022548	XRCC6	99	55.651	ENSOMEG00000008998	xrcc6	99	54.812	Oryzias_melastigma
ENSPTRG00000022548	XRCC6	99	87.780	ENSOGAG00000008821	XRCC6	99	87.007	Otolemur_garnettii
ENSPTRG00000022548	XRCC6	94	100.000	ENSPPAG00000037167	XRCC6	100	100.000	Pan_paniscus
ENSPTRG00000022548	XRCC6	100	99.015	ENSPANG00000001252	XRCC6	100	99.015	Papio_anubis
ENSPTRG00000022548	XRCC6	98	61.552	ENSPKIG00000003974	xrcc6	99	60.526	Paramormyrops_kingsleyae
ENSPTRG00000022548	XRCC6	98	57.118	ENSPMGG00000014220	xrcc6	100	55.702	Periophthalmus_magnuspinnatus
ENSPTRG00000022548	XRCC6	99	84.509	ENSPEMG00000023446	Xrcc6	99	83.553	Peromyscus_maniculatus_bairdii
ENSPTRG00000022548	XRCC6	100	79.016	ENSPCIG00000026409	XRCC6	99	78.852	Phascolarctos_cinereus
ENSPTRG00000022548	XRCC6	99	56.581	ENSPFOG00000017173	xrcc6	99	55.392	Poecilia_formosa
ENSPTRG00000022548	XRCC6	99	56.239	ENSPLAG00000000562	xrcc6	99	55.065	Poecilia_latipinna
ENSPTRG00000022548	XRCC6	99	56.581	ENSPMEG00000018478	xrcc6	99	55.556	Poecilia_mexicana
ENSPTRG00000022548	XRCC6	99	56.559	ENSPREG00000020957	xrcc6	93	55.375	Poecilia_reticulata
ENSPTRG00000022548	XRCC6	100	88.670	ENSPPYG00000011876	XRCC6	100	88.670	Pongo_abelii
ENSPTRG00000022548	XRCC6	99	85.862	ENSPVAG00000001168	XRCC6	99	84.704	Pteropus_vampyrus
ENSPTRG00000022548	XRCC6	99	56.414	ENSPNYG00000003815	xrcc6	99	53.521	Pundamilia_nyererei
ENSPTRG00000022548	XRCC6	99	84.337	ENSRNOG00000006392	Xrcc6	99	83.388	Rattus_norvegicus
ENSPTRG00000022548	XRCC6	100	92.447	ENSRBIG00000039794	XRCC6	100	92.447	Rhinopithecus_bieti
ENSPTRG00000022548	XRCC6	100	99.179	ENSRROG00000030297	XRCC6	100	99.179	Rhinopithecus_roxellana
ENSPTRG00000022548	XRCC6	73	85.504	ENSSBOG00000024724	-	100	85.504	Saimiri_boliviensis_boliviensis
ENSPTRG00000022548	XRCC6	99	78.694	ENSSHAG00000010790	XRCC6	99	77.833	Sarcophilus_harrisii
ENSPTRG00000022548	XRCC6	99	61.512	ENSSFOG00015014409	xrcc6	99	60.656	Scleropages_formosus
ENSPTRG00000022548	XRCC6	99	56.743	ENSSMAG00000006496	xrcc6	99	56.743	Scophthalmus_maximus
ENSPTRG00000022548	XRCC6	99	57.192	ENSSDUG00000007542	xrcc6	99	56.373	Seriola_dumerili
ENSPTRG00000022548	XRCC6	99	56.336	ENSSLDG00000009974	xrcc6	99	55.556	Seriola_lalandi_dorsalis
ENSPTRG00000022548	XRCC6	99	74.055	ENSSPUG00000012086	XRCC6	99	73.399	Sphenodon_punctatus
ENSPTRG00000022548	XRCC6	99	57.192	ENSSPAG00000015199	xrcc6	99	56.209	Stegastes_partitus
ENSPTRG00000022548	XRCC6	99	72.117	ENSTGUG00000009852	-	95	72.165	Taeniopygia_guttata
ENSPTRG00000022548	XRCC6	98	56.379	ENSTRUG00000017070	xrcc6	99	55.099	Takifugu_rubripes
ENSPTRG00000022548	XRCC6	99	56.926	ENSTNIG00000012947	xrcc6	99	56.949	Tetraodon_nigroviridis
ENSPTRG00000022548	XRCC6	99	78.485	ENSTBEG00000011736	XRCC6	99	78.485	Tupaia_belangeri
ENSPTRG00000022548	XRCC6	99	72.021	ENSTTRG00000006749	XRCC6	99	71.546	Tursiops_truncatus
ENSPTRG00000022548	XRCC6	99	56.410	ENSXMAG00000009691	xrcc6	99	55.392	Xiphophorus_maculatus