EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPTRG00000023130 (Gene tree)
Gene ID: 458319
Gene Symbol: STAU1
Alias: -
Full Name: staufen double-stranded RNA binding protein 1
Gene Type: protein_coding
Species: Pan_troglodytes
Status: putative
Strand: Minus strand
Length: 75405 bases
Position: chr20:50861512-50936916
Accession: 6274
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTRP00000072207	dsrm	PF00035.26	4.2e-34	1	3
ENSPTRP00000072207	dsrm	PF00035.26	4.2e-34	2	3
ENSPTRP00000072207	dsrm	PF00035.26	4.2e-34	3	3
ENSPTRP00000043160	dsrm	PF00035.26	8.8e-31	1	3
ENSPTRP00000043160	dsrm	PF00035.26	8.8e-31	2	3
ENSPTRP00000043160	dsrm	PF00035.26	8.8e-31	3	3
ENSPTRP00000093560	dsrm	PF00035.26	1.6e-29	1	3
ENSPTRP00000093560	dsrm	PF00035.26	1.6e-29	2	3
ENSPTRP00000093560	dsrm	PF00035.26	1.6e-29	3	3
ENSPTRP00000078164	dsrm	PF00035.26	8.3e-20	1	2
ENSPTRP00000078164	dsrm	PF00035.26	8.3e-20	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTRT00000050938	-	3703	XM_016938091	ENSPTRP00000043160	502 (aa)	XP_016793580	A0A2J8MJJ3
ENSPTRT00000083398	-	1758	-	ENSPTRP00000093560	585 (aa)	-	A0A2I3TWB5
ENSPTRT00000108247	-	3182	-	ENSPTRP00000078164	365 (aa)	-	A0A2I3SM97
ENSPTRT00000082515	-	1464	-	ENSPTRP00000072207	487 (aa)	-	A0A2I3S6M1

Gene Model

Click here to download ENSPTRG00000023130's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000023130's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPTRG00000023130	STAU1	80	42.395	ENSPTRG00000043384	-	99	43.574
ENSPTRG00000023130	STAU1	59	30.729	ENSPTRG00000012688	PRKRA	58	30.729
ENSPTRG00000023130	STAU1	96	49.801	ENSPTRG00000047797	STAU2	97	46.038
ENSPTRG00000023130	STAU1	84	33.790	ENSPTRG00000045302	-	86	32.464

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTRG00000023130	STAU1	100	100.000	ENSG00000124214	STAU1	100	99.801	Homo_sapiens
ENSPTRG00000023130	STAU1	99	75.824	ENSAPOG00000017260	stau1	93	66.239	Acanthochromis_polyacanthus
ENSPTRG00000023130	STAU1	99	95.291	ENSAMEG00000013681	STAU1	95	89.105	Ailuropoda_melanoleuca
ENSPTRG00000023130	STAU1	99	77.747	ENSACIG00000015918	stau1	96	69.591	Amphilophus_citrinellus
ENSPTRG00000023130	STAU1	99	77.473	ENSAOCG00000012224	stau1	93	67.339	Amphiprion_ocellaris
ENSPTRG00000023130	STAU1	99	77.473	ENSAPEG00000012308	stau1	93	67.339	Amphiprion_percula
ENSPTRG00000023130	STAU1	99	78.056	ENSATEG00000024600	stau1	99	69.231	Anabas_testudineus
ENSPTRG00000023130	STAU1	99	91.690	ENSAPLG00000010527	STAU1	94	85.185	Anas_platyrhynchos
ENSPTRG00000023130	STAU1	99	90.884	ENSACAG00000015909	STAU1	95	85.019	Anolis_carolinensis
ENSPTRG00000023130	STAU1	100	99.602	ENSANAG00000032714	STAU1	100	95.043	Aotus_nancymaae
ENSPTRG00000023130	STAU1	99	76.923	ENSACLG00000012270	stau1	96	67.939	Astatotilapia_calliptera
ENSPTRG00000023130	STAU1	100	75.749	ENSAMXG00000016812	stau1	99	65.870	Astyanax_mexicanus
ENSPTRG00000023130	STAU1	100	94.247	ENSBTAG00000000241	STAU1	100	89.761	Bos_taurus
ENSPTRG00000023130	STAU1	100	99.452	ENSCJAG00000016233	STAU1	100	93.686	Callithrix_jacchus
ENSPTRG00000023130	STAU1	100	96.164	ENSCAFG00000011347	STAU1	98	90.956	Canis_familiaris
ENSPTRG00000023130	STAU1	100	96.164	ENSCAFG00020017123	STAU1	100	88.931	Canis_lupus_dingo
ENSPTRG00000023130	STAU1	100	93.973	ENSCHIG00000001799	-	100	89.420	Capra_hircus
ENSPTRG00000023130	STAU1	100	95.616	ENSTSYG00000036179	-	100	89.761	Carlito_syrichta
ENSPTRG00000023130	STAU1	100	95.890	ENSCAPG00000017041	STAU1	100	93.028	Cavia_aperea
ENSPTRG00000023130	STAU1	99	93.333	ENSCPOG00000005566	STAU1	100	93.333	Cavia_porcellus
ENSPTRG00000023130	STAU1	100	99.402	ENSCCAG00000034339	STAU1	100	94.872	Cebus_capucinus
ENSPTRG00000023130	STAU1	100	99.602	ENSCATG00000028474	STAU1	100	99.602	Cercocebus_atys
ENSPTRG00000023130	STAU1	100	96.712	ENSCLAG00000006516	-	100	97.172	Chinchilla_lanigera
ENSPTRG00000023130	STAU1	100	78.202	ENSCLAG00000002784	-	100	77.579	Chinchilla_lanigera
ENSPTRG00000023130	STAU1	100	99.178	ENSCSAG00000014986	STAU1	100	98.207	Chlorocebus_sabaeus
ENSPTRG00000023130	STAU1	100	96.995	ENSCHOG00000001511	STAU1	100	91.312	Choloepus_hoffmanni
ENSPTRG00000023130	STAU1	99	90.608	ENSCPBG00000026741	STAU1	96	85.019	Chrysemys_picta_bellii
ENSPTRG00000023130	STAU1	100	99.452	ENSCANG00000039220	STAU1	100	99.316	Colobus_angolensis_palliatus
ENSPTRG00000023130	STAU1	100	92.055	ENSCGRG00001013453	Stau1	100	91.717	Cricetulus_griseus_chok1gshd
ENSPTRG00000023130	STAU1	100	92.055	ENSCGRG00000007216	Stau1	100	91.717	Cricetulus_griseus_crigri
ENSPTRG00000023130	STAU1	99	76.099	ENSCSEG00000000792	stau1	74	62.247	Cynoglossus_semilaevis
ENSPTRG00000023130	STAU1	99	75.833	ENSCVAG00000005906	stau1	99	64.615	Cyprinodon_variegatus
ENSPTRG00000023130	STAU1	99	78.415	ENSDARG00000044182	stau1	96	69.202	Danio_rerio
ENSPTRG00000023130	STAU1	100	97.268	ENSDNOG00000014933	STAU1	98	91.823	Dasypus_novemcinctus
ENSPTRG00000023130	STAU1	99	91.313	ENSDORG00000030220	Stau1	100	91.313	Dipodomys_ordii
ENSPTRG00000023130	STAU1	85	97.541	ENSETEG00000018235	STAU1	82	96.491	Echinops_telfairi
ENSPTRG00000023130	STAU1	100	97.410	ENSEASG00005023343	STAU1	100	93.162	Equus_asinus_asinus
ENSPTRG00000023130	STAU1	100	96.438	ENSECAG00000012894	STAU1	100	91.638	Equus_caballus
ENSPTRG00000023130	STAU1	100	95.068	ENSEEUG00000014344	STAU1	79	100.000	Erinaceus_europaeus
ENSPTRG00000023130	STAU1	99	75.946	ENSELUG00000002529	stau1	93	65.461	Esox_lucius
ENSPTRG00000023130	STAU1	100	96.712	ENSFCAG00000001447	STAU1	100	92.402	Felis_catus
ENSPTRG00000023130	STAU1	99	90.331	ENSFALG00000012940	STAU1	96	81.748	Ficedula_albicollis
ENSPTRG00000023130	STAU1	100	72.336	ENSFDAG00000020837	-	100	72.336	Fukomys_damarensis
ENSPTRG00000023130	STAU1	100	95.890	ENSFDAG00000014119	-	100	96.364	Fukomys_damarensis
ENSPTRG00000023130	STAU1	99	76.648	ENSFHEG00000013517	stau1	96	67.885	Fundulus_heteroclitus
ENSPTRG00000023130	STAU1	99	64.674	ENSGMOG00000016850	stau1	96	58.169	Gadus_morhua
ENSPTRG00000023130	STAU1	99	92.265	ENSGALG00000004736	STAU1	96	84.272	Gallus_gallus
ENSPTRG00000023130	STAU1	99	77.198	ENSGAFG00000010437	stau1	96	68.269	Gambusia_affinis
ENSPTRG00000023130	STAU1	99	77.222	ENSGACG00000001352	stau1	94	68.714	Gasterosteus_aculeatus
ENSPTRG00000023130	STAU1	99	90.331	ENSGAGG00000009825	STAU1	96	83.495	Gopherus_agassizii
ENSPTRG00000023130	STAU1	100	100.000	ENSGGOG00000025351	STAU1	100	100.000	Gorilla_gorilla
ENSPTRG00000023130	STAU1	99	76.923	ENSHBUG00000023668	stau1	96	68.130	Haplochromis_burtoni
ENSPTRG00000023130	STAU1	100	96.712	ENSHGLG00000008730	STAU1	100	96.162	Heterocephalus_glaber_female
ENSPTRG00000023130	STAU1	100	96.712	ENSHGLG00100000098	STAU1	100	97.172	Heterocephalus_glaber_male
ENSPTRG00000023130	STAU1	99	75.414	ENSHCOG00000018461	stau1	92	62.821	Hippocampus_comes
ENSPTRG00000023130	STAU1	92	77.381	ENSIPUG00000023725	stau1	95	69.106	Ictalurus_punctatus
ENSPTRG00000023130	STAU1	100	95.616	ENSSTOG00000003634	STAU1	100	95.354	Ictidomys_tridecemlineatus
ENSPTRG00000023130	STAU1	100	94.521	ENSJJAG00000020032	Stau1	100	93.131	Jaculus_jaculus
ENSPTRG00000023130	STAU1	99	75.549	ENSKMAG00000007135	stau1	93	67.245	Kryptolebias_marmoratus
ENSPTRG00000023130	STAU1	99	74.725	ENSLBEG00000020172	stau1	93	63.934	Labrus_bergylta
ENSPTRG00000023130	STAU1	99	85.359	ENSLACG00000016157	STAU1	96	77.220	Latimeria_chalumnae
ENSPTRG00000023130	STAU1	99	82.692	ENSLOCG00000003134	stau1	96	71.875	Lepisosteus_oculatus
ENSPTRG00000023130	STAU1	100	94.247	ENSLAFG00000003238	STAU1	97	94.024	Loxodonta_africana
ENSPTRG00000023130	STAU1	100	99.602	ENSMFAG00000040931	STAU1	100	99.602	Macaca_fascicularis
ENSPTRG00000023130	STAU1	100	99.602	ENSMMUG00000002302	STAU1	100	99.602	Macaca_mulatta
ENSPTRG00000023130	STAU1	100	99.602	ENSMNEG00000033821	STAU1	100	99.602	Macaca_nemestrina
ENSPTRG00000023130	STAU1	100	99.452	ENSMLEG00000031383	STAU1	100	99.316	Mandrillus_leucophaeus
ENSPTRG00000023130	STAU1	99	78.333	ENSMAMG00000017586	stau1	99	68.156	Mastacembelus_armatus
ENSPTRG00000023130	STAU1	99	76.923	ENSMZEG00005015605	stau1	96	65.693	Maylandia_zebra
ENSPTRG00000023130	STAU1	99	91.967	ENSMGAG00000004719	STAU1	94	85.380	Meleagris_gallopavo
ENSPTRG00000023130	STAU1	100	91.781	ENSMAUG00000013846	Stau1	100	91.313	Mesocricetus_auratus
ENSPTRG00000023130	STAU1	100	96.813	ENSMICG00000001995	STAU1	100	92.821	Microcebus_murinus
ENSPTRG00000023130	STAU1	100	92.877	ENSMOCG00000018743	Stau1	100	92.929	Microtus_ochrogaster
ENSPTRG00000023130	STAU1	100	75.068	ENSMMOG00000015455	stau1	99	72.817	Mola_mola
ENSPTRG00000023130	STAU1	100	93.973	ENSMODG00000016276	STAU1	99	87.066	Monodelphis_domestica
ENSPTRG00000023130	STAU1	99	78.022	ENSMALG00000000045	stau1	93	67.156	Monopterus_albus
ENSPTRG00000023130	STAU1	100	92.603	MGP_CAROLIEiJ_G0024699	Stau1	100	91.515	Mus_caroli
ENSPTRG00000023130	STAU1	100	91.781	ENSMUSG00000039536	Stau1	100	90.909	Mus_musculus
ENSPTRG00000023130	STAU1	100	92.329	MGP_PahariEiJ_G0026141	Stau1	100	91.111	Mus_pahari
ENSPTRG00000023130	STAU1	100	91.507	MGP_SPRETEiJ_G0025619	Stau1	100	90.505	Mus_spretus
ENSPTRG00000023130	STAU1	99	96.676	ENSMPUG00000017581	STAU1	99	90.078	Mustela_putorius_furo
ENSPTRG00000023130	STAU1	100	96.164	ENSMLUG00000008407	STAU1	98	90.956	Myotis_lucifugus
ENSPTRG00000023130	STAU1	100	94.795	ENSNGAG00000007108	Stau1	100	94.747	Nannospalax_galili
ENSPTRG00000023130	STAU1	99	76.923	ENSNBRG00000017596	stau1	96	68.130	Neolamprologus_brichardi
ENSPTRG00000023130	STAU1	100	99.452	ENSNLEG00000006955	STAU1	100	99.402	Nomascus_leucogenys
ENSPTRG00000023130	STAU1	100	94.521	ENSMEUG00000003263	STAU1	99	81.100	Notamacropus_eugenii
ENSPTRG00000023130	STAU1	100	93.699	ENSOPRG00000014569	STAU1	100	83.133	Ochotona_princeps
ENSPTRG00000023130	STAU1	100	95.068	ENSODEG00000006523	STAU1	100	95.020	Octodon_degus
ENSPTRG00000023130	STAU1	99	76.923	ENSONIG00000004152	stau1	95	68.130	Oreochromis_niloticus
ENSPTRG00000023130	STAU1	99	89.779	ENSOANG00000006394	STAU1	96	85.019	Ornithorhynchus_anatinus
ENSPTRG00000023130	STAU1	100	94.422	ENSOCUG00000006214	STAU1	100	88.737	Oryctolagus_cuniculus
ENSPTRG00000023130	STAU1	99	76.111	ENSOMEG00000002388	stau1	96	64.880	Oryzias_melastigma
ENSPTRG00000023130	STAU1	100	97.260	ENSOGAG00000002127	STAU1	98	91.126	Otolemur_garnettii
ENSPTRG00000023130	STAU1	99	70.924	ENSOGAG00000028222	-	99	66.335	Otolemur_garnettii
ENSPTRG00000023130	STAU1	100	93.973	ENSOARG00000012204	STAU1	100	88.224	Ovis_aries
ENSPTRG00000023130	STAU1	100	100.000	ENSPPAG00000032023	STAU1	100	100.000	Pan_paniscus
ENSPTRG00000023130	STAU1	100	96.712	ENSPPRG00000003436	STAU1	100	95.817	Panthera_pardus
ENSPTRG00000023130	STAU1	100	96.712	ENSPTIG00000011768	STAU1	100	94.499	Panthera_tigris_altaica
ENSPTRG00000023130	STAU1	100	99.452	ENSPANG00000020560	STAU1	100	96.825	Papio_anubis
ENSPTRG00000023130	STAU1	99	75.543	ENSPKIG00000024588	stau1	93	66.545	Paramormyrops_kingsleyae
ENSPTRG00000023130	STAU1	99	90.331	ENSPSIG00000010731	STAU1	95	83.301	Pelodiscus_sinensis
ENSPTRG00000023130	STAU1	99	77.624	ENSPMGG00000018553	stau1	99	71.600	Periophthalmus_magnuspinnatus
ENSPTRG00000023130	STAU1	100	91.507	ENSPEMG00000022045	Stau1	100	91.717	Peromyscus_maniculatus_bairdii
ENSPTRG00000023130	STAU1	100	93.973	ENSPCIG00000023269	STAU1	100	89.231	Phascolarctos_cinereus
ENSPTRG00000023130	STAU1	96	77.364	ENSPFOG00000017253	stau1	96	68.269	Poecilia_formosa
ENSPTRG00000023130	STAU1	63	67.081	ENSPLAG00000014829	stau1	79	68.944	Poecilia_latipinna
ENSPTRG00000023130	STAU1	93	72.059	ENSPMEG00000007495	stau1	94	67.213	Poecilia_mexicana
ENSPTRG00000023130	STAU1	96	76.791	ENSPREG00000003477	stau1	96	67.692	Poecilia_reticulata
ENSPTRG00000023130	STAU1	100	99.726	ENSPPYG00000011111	STAU1	100	93.515	Pongo_abelii
ENSPTRG00000023130	STAU1	93	85.714	ENSPCAG00000002459	STAU1	100	82.459	Procavia_capensis
ENSPTRG00000023130	STAU1	100	97.211	ENSPCOG00000027746	STAU1	100	97.211	Propithecus_coquereli
ENSPTRG00000023130	STAU1	84	99.130	ENSPVAG00000015019	STAU1	82	97.661	Pteropus_vampyrus
ENSPTRG00000023130	STAU1	99	76.923	ENSPNYG00000014436	stau1	96	68.130	Pundamilia_nyererei
ENSPTRG00000023130	STAU1	99	75.543	ENSPNAG00000011323	stau1	96	68.053	Pygocentrus_nattereri
ENSPTRG00000023130	STAU1	100	92.055	ENSRNOG00000007781	Stau1	100	91.515	Rattus_norvegicus
ENSPTRG00000023130	STAU1	100	99.602	ENSRBIG00000037345	STAU1	100	99.602	Rhinopithecus_bieti
ENSPTRG00000023130	STAU1	100	99.452	ENSRROG00000039008	STAU1	100	98.008	Rhinopithecus_roxellana
ENSPTRG00000023130	STAU1	100	99.402	ENSSBOG00000034448	STAU1	100	94.872	Saimiri_boliviensis_boliviensis
ENSPTRG00000023130	STAU1	100	93.973	ENSSHAG00000009492	STAU1	97	88.316	Sarcophilus_harrisii
ENSPTRG00000023130	STAU1	99	79.945	ENSSFOG00015021497	stau1	99	65.404	Scleropages_formosus
ENSPTRG00000023130	STAU1	99	77.747	ENSSMAG00000017410	stau1	93	66.972	Scophthalmus_maximus
ENSPTRG00000023130	STAU1	99	78.297	ENSSDUG00000019439	stau1	93	67.706	Seriola_dumerili
ENSPTRG00000023130	STAU1	99	78.297	ENSSLDG00000025040	stau1	93	67.706	Seriola_lalandi_dorsalis
ENSPTRG00000023130	STAU1	70	94.118	ENSSARG00000010389	-	64	94.118	Sorex_araneus
ENSPTRG00000023130	STAU1	99	89.779	ENSSPUG00000017983	STAU1	100	84.211	Sphenodon_punctatus
ENSPTRG00000023130	STAU1	99	77.473	ENSSPAG00000019275	stau1	93	67.339	Stegastes_partitus
ENSPTRG00000023130	STAU1	100	96.164	ENSSSCG00000027444	STAU1	100	96.016	Sus_scrofa
ENSPTRG00000023130	STAU1	99	90.055	ENSTGUG00000008784	STAU1	93	83.852	Taeniopygia_guttata
ENSPTRG00000023130	STAU1	99	78.630	ENSTRUG00000005837	stau1	93	70.000	Takifugu_rubripes
ENSPTRG00000023130	STAU1	99	76.099	ENSTNIG00000014732	stau1	95	67.108	Tetraodon_nigroviridis
ENSPTRG00000023130	STAU1	100	80.716	ENSTBEG00000009404	STAU1	100	77.683	Tupaia_belangeri
ENSPTRG00000023130	STAU1	100	93.699	ENSTTRG00000004285	STAU1	100	82.051	Tursiops_truncatus
ENSPTRG00000023130	STAU1	100	95.616	ENSUAMG00000025449	STAU1	100	93.320	Ursus_americanus
ENSPTRG00000023130	STAU1	75	91.146	ENSUMAG00000024475	STAU1	89	91.146	Ursus_maritimus
ENSPTRG00000023130	STAU1	100	96.164	ENSVPAG00000001313	STAU1	100	91.638	Vicugna_pacos
ENSPTRG00000023130	STAU1	100	96.438	ENSVVUG00000022325	STAU1	100	89.122	Vulpes_vulpes
ENSPTRG00000023130	STAU1	99	84.022	ENSXETG00000001783	stau1	96	77.864	Xenopus_tropicalis
ENSPTRG00000023130	STAU1	56	69.928	ENSXCOG00000008804	stau1	74	69.128	Xiphophorus_couchianus
ENSPTRG00000023130	STAU1	99	76.923	ENSXMAG00000016175	stau1	96	68.269	Xiphophorus_maculatus