EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPTRG00000023558 (Gene tree)
Gene ID: 745296
Gene Symbol: C1D
Alias: -
Full Name: C1D nuclear receptor corepressor
Gene Type: protein_coding
Species: Pan_troglodytes
Status: putative
Strand: Minus strand
Length: 21269 bases
Position: chr2A:69449778-69471046
Accession: 178
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTRP00000055317	Sas10_Utp3	PF04000.15	5.6e-17	1	1
ENSPTRP00000068576	Sas10_Utp3	PF04000.15	9.9e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTRT00000083761	-	543	-	ENSPTRP00000068576	180 (aa)	-	A0A2I3RVC0
ENSPTRT00000063773	-	1686	XM_001167269	ENSPTRP00000055317	141 (aa)	XP_001167269	H2RB90

Gene Model

Click here to download ENSPTRG00000023558's gene model file

Pathways

Pathway ID	Pathway Name	Source
ptr03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000023558's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTRG00000023558	C1D	100	99.291	ENSG00000197223	C1D	100	99.291	Homo_sapiens
ENSPTRG00000023558	C1D	100	62.676	ENSAPOG00000005466	c1d	95	62.676	Acanthochromis_polyacanthus
ENSPTRG00000023558	C1D	99	98.561	ENSAMEG00000004859	C1D	95	98.561	Ailuropoda_melanoleuca
ENSPTRG00000023558	C1D	94	65.152	ENSACIG00000012684	c1d	86	65.152	Amphilophus_citrinellus
ENSPTRG00000023558	C1D	93	64.394	ENSAOCG00000020354	c1d	87	64.062	Amphiprion_ocellaris
ENSPTRG00000023558	C1D	94	64.662	ENSAPEG00000001403	c1d	86	64.662	Amphiprion_percula
ENSPTRG00000023558	C1D	96	64.964	ENSATEG00000012922	c1d	88	64.964	Anabas_testudineus
ENSPTRG00000023558	C1D	97	75.714	ENSAPLG00000009320	C1D	97	75.714	Anas_platyrhynchos
ENSPTRG00000023558	C1D	87	81.967	ENSACAG00000001337	C1D	100	81.967	Anolis_carolinensis
ENSPTRG00000023558	C1D	100	95.745	ENSANAG00000005773	-	100	95.745	Aotus_nancymaae
ENSPTRG00000023558	C1D	100	99.291	ENSANAG00000035972	-	100	99.291	Aotus_nancymaae
ENSPTRG00000023558	C1D	87	66.393	ENSACLG00000026206	c1d	93	61.429	Astatotilapia_calliptera
ENSPTRG00000023558	C1D	99	62.238	ENSAMXG00000043212	c1d	98	62.238	Astyanax_mexicanus
ENSPTRG00000023558	C1D	100	97.872	ENSBTAG00000049002	C1D	100	97.872	Bos_taurus
ENSPTRG00000023558	C1D	83	89.744	ENSCJAG00000044668	-	91	89.744	Callithrix_jacchus
ENSPTRG00000023558	C1D	100	100.000	ENSCJAG00000006589	C1D	93	99.291	Callithrix_jacchus
ENSPTRG00000023558	C1D	100	96.454	ENSCAFG00000030099	C1D	100	96.454	Canis_familiaris
ENSPTRG00000023558	C1D	100	96.454	ENSCAFG00020026997	C1D	100	96.454	Canis_lupus_dingo
ENSPTRG00000023558	C1D	100	97.163	ENSCHIG00000025729	C1D	100	97.163	Capra_hircus
ENSPTRG00000023558	C1D	100	97.872	ENSTSYG00000035739	-	100	97.872	Carlito_syrichta
ENSPTRG00000023558	C1D	99	87.857	ENSTSYG00000026573	-	91	84.314	Carlito_syrichta
ENSPTRG00000023558	C1D	100	72.340	ENSCAPG00000011523	-	100	72.340	Cavia_aperea
ENSPTRG00000023558	C1D	100	93.617	ENSCPOG00000037986	-	100	93.617	Cavia_porcellus
ENSPTRG00000023558	C1D	100	73.050	ENSCPOG00000020112	-	100	73.050	Cavia_porcellus
ENSPTRG00000023558	C1D	100	100.000	ENSCCAG00000030405	-	100	100.000	Cebus_capucinus
ENSPTRG00000023558	C1D	100	96.454	ENSCATG00000043348	-	100	96.454	Cercocebus_atys
ENSPTRG00000023558	C1D	100	99.291	ENSCATG00000045336	C1D	100	99.291	Cercocebus_atys
ENSPTRG00000023558	C1D	100	95.035	ENSCLAG00000011883	C1D	100	95.035	Chinchilla_lanigera
ENSPTRG00000023558	C1D	100	97.872	ENSCSAG00000014811	C1D	100	97.872	Chlorocebus_sabaeus
ENSPTRG00000023558	C1D	100	97.872	ENSCHOG00000006719	C1D	100	87.778	Choloepus_hoffmanni
ENSPTRG00000023558	C1D	94	81.203	ENSCPBG00000014451	C1D	90	81.203	Chrysemys_picta_bellii
ENSPTRG00000023558	C1D	86	42.149	ENSCING00000020906	-	64	41.803	Ciona_intestinalis
ENSPTRG00000023558	C1D	83	47.009	ENSCSAVG00000000150	-	67	47.009	Ciona_savignyi
ENSPTRG00000023558	C1D	87	85.366	ENSCANG00000036599	-	100	85.366	Colobus_angolensis_palliatus
ENSPTRG00000023558	C1D	100	98.582	ENSCANG00000035564	C1D	100	98.582	Colobus_angolensis_palliatus
ENSPTRG00000023558	C1D	99	92.143	ENSCGRG00001023376	C1d	99	92.143	Cricetulus_griseus_chok1gshd
ENSPTRG00000023558	C1D	99	92.143	ENSCGRG00000010245	C1d	99	92.143	Cricetulus_griseus_crigri
ENSPTRG00000023558	C1D	100	59.155	ENSCSEG00000000587	c1d	91	61.538	Cynoglossus_semilaevis
ENSPTRG00000023558	C1D	96	61.765	ENSCVAG00000004603	c1d	87	63.359	Cyprinodon_variegatus
ENSPTRG00000023558	C1D	87	65.041	ENSDARG00000021112	c1d	95	60.284	Danio_rerio
ENSPTRG00000023558	C1D	100	89.362	ENSDNOG00000046068	-	100	89.362	Dasypus_novemcinctus
ENSPTRG00000023558	C1D	100	93.617	ENSDORG00000003300	C1d	100	93.617	Dipodomys_ordii
ENSPTRG00000023558	C1D	67	92.632	ENSETEG00000014857	C1D	100	92.632	Echinops_telfairi
ENSPTRG00000023558	C1D	87	57.377	ENSEBUG00000006874	c1d	86	53.676	Eptatretus_burgeri
ENSPTRG00000023558	C1D	100	97.872	ENSEASG00005007307	C1D	93	97.203	Equus_asinus_asinus
ENSPTRG00000023558	C1D	99	97.842	ENSECAG00000002187	C1D	99	98.551	Equus_caballus
ENSPTRG00000023558	C1D	100	64.539	ENSELUG00000014823	c1d	96	64.539	Esox_lucius
ENSPTRG00000023558	C1D	100	98.582	ENSFCAG00000028933	C1D	100	98.582	Felis_catus
ENSPTRG00000023558	C1D	93	81.955	ENSFALG00000013640	C1D	81	81.955	Ficedula_albicollis
ENSPTRG00000023558	C1D	100	95.745	ENSFDAG00000010462	-	100	95.745	Fukomys_damarensis
ENSPTRG00000023558	C1D	100	75.352	ENSFDAG00000014175	-	100	75.352	Fukomys_damarensis
ENSPTRG00000023558	C1D	99	63.571	ENSFHEG00000010545	c1d	97	63.571	Fundulus_heteroclitus
ENSPTRG00000023558	C1D	83	64.957	ENSGMOG00000013911	-	93	64.957	Gadus_morhua
ENSPTRG00000023558	C1D	90	81.250	ENSGALG00000008765	C1D	89	81.250	Gallus_gallus
ENSPTRG00000023558	C1D	92	64.615	ENSGAFG00000012578	c1d	83	65.116	Gambusia_affinis
ENSPTRG00000023558	C1D	89	63.200	ENSGACG00000011981	c1d	98	63.200	Gasterosteus_aculeatus
ENSPTRG00000023558	C1D	86	83.471	ENSGAGG00000013383	C1D	90	78.195	Gopherus_agassizii
ENSPTRG00000023558	C1D	100	91.489	ENSGGOG00000025808	-	100	79.444	Gorilla_gorilla
ENSPTRG00000023558	C1D	100	97.872	ENSGGOG00000022296	-	100	97.872	Gorilla_gorilla
ENSPTRG00000023558	C1D	100	99.291	ENSGGOG00000025982	-	100	98.889	Gorilla_gorilla
ENSPTRG00000023558	C1D	82	67.241	ENSHBUG00000018531	c1d	80	61.940	Haplochromis_burtoni
ENSPTRG00000023558	C1D	98	85.507	ENSHGLG00000021219	-	98	85.507	Heterocephalus_glaber_female
ENSPTRG00000023558	C1D	92	96.154	ENSHGLG00000012332	-	99	94.286	Heterocephalus_glaber_female
ENSPTRG00000023558	C1D	98	86.232	ENSHGLG00100019951	-	98	86.232	Heterocephalus_glaber_male
ENSPTRG00000023558	C1D	100	92.908	ENSHGLG00100000221	-	100	92.908	Heterocephalus_glaber_male
ENSPTRG00000023558	C1D	91	63.359	ENSHCOG00000014568	C1D	89	63.359	Hippocampus_comes
ENSPTRG00000023558	C1D	91	63.359	ENSHCOG00000014589	c1d	89	63.359	Hippocampus_comes
ENSPTRG00000023558	C1D	92	60.902	ENSIPUG00000018661	c1d	92	60.902	Ictalurus_punctatus
ENSPTRG00000023558	C1D	100	97.872	ENSSTOG00000012346	C1D	100	97.872	Ictidomys_tridecemlineatus
ENSPTRG00000023558	C1D	98	83.333	ENSJJAG00000005044	-	100	83.333	Jaculus_jaculus
ENSPTRG00000023558	C1D	89	80.769	ENSJJAG00000023186	-	99	80.769	Jaculus_jaculus
ENSPTRG00000023558	C1D	98	74.638	ENSJJAG00000016086	-	100	74.638	Jaculus_jaculus
ENSPTRG00000023558	C1D	98	82.609	ENSJJAG00000009540	-	100	82.609	Jaculus_jaculus
ENSPTRG00000023558	C1D	96	65.441	ENSKMAG00000015077	c1d	88	65.441	Kryptolebias_marmoratus
ENSPTRG00000023558	C1D	95	64.925	ENSLBEG00000008351	c1d	85	64.925	Labrus_bergylta
ENSPTRG00000023558	C1D	94	75.940	ENSLACG00000007516	C1D	83	79.839	Latimeria_chalumnae
ENSPTRG00000023558	C1D	100	66.901	ENSLOCG00000016024	c1d	96	66.901	Lepisosteus_oculatus
ENSPTRG00000023558	C1D	100	95.745	ENSLAFG00000002083	C1D	100	95.745	Loxodonta_africana
ENSPTRG00000023558	C1D	100	97.872	ENSMFAG00000028681	-	100	97.872	Macaca_fascicularis
ENSPTRG00000023558	C1D	100	99.291	ENSMFAG00000034261	C1D	100	99.291	Macaca_fascicularis
ENSPTRG00000023558	C1D	100	95.745	ENSMFAG00000034034	-	100	95.745	Macaca_fascicularis
ENSPTRG00000023558	C1D	98	99.275	ENSMMUG00000041557	C1D	99	99.275	Macaca_mulatta
ENSPTRG00000023558	C1D	100	97.163	ENSMMUG00000017209	-	100	97.163	Macaca_mulatta
ENSPTRG00000023558	C1D	100	95.035	ENSMMUG00000043184	-	100	95.035	Macaca_mulatta
ENSPTRG00000023558	C1D	100	99.291	ENSMNEG00000040612	C1D	100	99.291	Macaca_nemestrina
ENSPTRG00000023558	C1D	100	95.035	ENSMNEG00000020626	-	100	95.035	Macaca_nemestrina
ENSPTRG00000023558	C1D	100	99.291	ENSMLEG00000027619	C1D	100	99.291	Mandrillus_leucophaeus
ENSPTRG00000023558	C1D	100	96.454	ENSMLEG00000028412	-	100	96.454	Mandrillus_leucophaeus
ENSPTRG00000023558	C1D	91	64.844	ENSMAMG00000022156	c1d	90	64.748	Mastacembelus_armatus
ENSPTRG00000023558	C1D	82	67.241	ENSMZEG00005027343	c1d	92	61.940	Maylandia_zebra
ENSPTRG00000023558	C1D	99	76.429	ENSMGAG00000004517	C1D	99	76.429	Meleagris_gallopavo
ENSPTRG00000023558	C1D	99	91.429	ENSMAUG00000008974	C1d	99	91.429	Mesocricetus_auratus
ENSPTRG00000023558	C1D	100	96.454	ENSMICG00000032141	C1D	100	96.454	Microcebus_murinus
ENSPTRG00000023558	C1D	99	92.143	ENSMOCG00000010860	C1d	99	92.143	Microtus_ochrogaster
ENSPTRG00000023558	C1D	94	65.909	ENSMMOG00000007332	c1d	85	65.909	Mola_mola
ENSPTRG00000023558	C1D	99	82.270	ENSMODG00000003561	C1D	99	82.270	Monodelphis_domestica
ENSPTRG00000023558	C1D	94	63.636	ENSMALG00000020864	c1d	95	64.800	Monopterus_albus
ENSPTRG00000023558	C1D	99	90.714	MGP_CAROLIEiJ_G0016110	C1d	100	92.373	Mus_caroli
ENSPTRG00000023558	C1D	99	90.714	ENSMUSG00000000581	C1d	100	92.373	Mus_musculus
ENSPTRG00000023558	C1D	99	91.429	MGP_PahariEiJ_G0016781	C1d	100	93.220	Mus_pahari
ENSPTRG00000023558	C1D	99	90.714	MGP_SPRETEiJ_G0016952	C1d	100	92.373	Mus_spretus
ENSPTRG00000023558	C1D	100	97.872	ENSMPUG00000006224	C1D	100	97.872	Mustela_putorius_furo
ENSPTRG00000023558	C1D	99	93.571	ENSMLUG00000024947	-	99	93.571	Myotis_lucifugus
ENSPTRG00000023558	C1D	99	95.714	ENSMLUG00000010791	-	99	95.714	Myotis_lucifugus
ENSPTRG00000023558	C1D	99	92.143	ENSMLUG00000029990	-	99	92.143	Myotis_lucifugus
ENSPTRG00000023558	C1D	100	89.362	ENSNGAG00000011872	-	100	89.362	Nannospalax_galili
ENSPTRG00000023558	C1D	89	81.746	ENSNGAG00000012482	-	100	81.746	Nannospalax_galili
ENSPTRG00000023558	C1D	100	81.560	ENSNGAG00000016675	-	100	81.560	Nannospalax_galili
ENSPTRG00000023558	C1D	82	66.379	ENSNBRG00000010704	c1d	92	61.194	Neolamprologus_brichardi
ENSPTRG00000023558	C1D	100	97.872	ENSNLEG00000032919	-	100	96.667	Nomascus_leucogenys
ENSPTRG00000023558	C1D	100	95.035	ENSOPRG00000009586	C1D	100	95.035	Ochotona_princeps
ENSPTRG00000023558	C1D	100	83.688	ENSODEG00000018525	-	100	83.688	Octodon_degus
ENSPTRG00000023558	C1D	98	96.377	ENSODEG00000018885	-	99	96.377	Octodon_degus
ENSPTRG00000023558	C1D	99	96.429	ENSODEG00000011242	-	99	96.429	Octodon_degus
ENSPTRG00000023558	C1D	87	66.667	ENSONIG00000001233	c1d	89	64.179	Oreochromis_niloticus
ENSPTRG00000023558	C1D	78	86.364	ENSOANG00000008385	C1D	99	86.364	Ornithorhynchus_anatinus
ENSPTRG00000023558	C1D	99	96.429	ENSOCUG00000025587	-	99	96.429	Oryctolagus_cuniculus
ENSPTRG00000023558	C1D	99	96.429	ENSOCUG00000009771	-	99	96.429	Oryctolagus_cuniculus
ENSPTRG00000023558	C1D	94	66.667	ENSORLG00000021968	c1d	83	66.667	Oryzias_latipes
ENSPTRG00000023558	C1D	94	66.667	ENSORLG00020000507	c1d	84	66.667	Oryzias_latipes_hni
ENSPTRG00000023558	C1D	89	68.000	ENSORLG00015004594	c1d	80	68.000	Oryzias_latipes_hsok
ENSPTRG00000023558	C1D	94	66.667	ENSOMEG00000004672	c1d	85	66.667	Oryzias_melastigma
ENSPTRG00000023558	C1D	100	95.745	ENSOGAG00000027934	-	100	95.745	Otolemur_garnettii
ENSPTRG00000023558	C1D	100	97.163	ENSOARG00000019931	C1D	100	96.479	Ovis_aries
ENSPTRG00000023558	C1D	100	92.199	ENSPPAG00000040091	-	100	79.444	Pan_paniscus
ENSPTRG00000023558	C1D	100	100.000	ENSPPAG00000037847	-	100	100.000	Pan_paniscus
ENSPTRG00000023558	C1D	100	65.957	ENSPPRG00000022830	-	100	65.957	Panthera_pardus
ENSPTRG00000023558	C1D	100	97.872	ENSPPRG00000017045	-	100	97.872	Panthera_pardus
ENSPTRG00000023558	C1D	100	98.582	ENSPTIG00000009414	C1D	100	98.582	Panthera_tigris_altaica
ENSPTRG00000023558	C1D	100	95.745	ENSPANG00000000501	-	100	95.745	Papio_anubis
ENSPTRG00000023558	C1D	100	99.291	ENSPANG00000002886	C1D	100	98.333	Papio_anubis
ENSPTRG00000023558	C1D	99	60.993	ENSPKIG00000004877	c1d	95	60.993	Paramormyrops_kingsleyae
ENSPTRG00000023558	C1D	94	83.459	ENSPSIG00000010015	C1D	92	83.459	Pelodiscus_sinensis
ENSPTRG00000023558	C1D	91	63.566	ENSPMGG00000009326	c1d	85	62.879	Periophthalmus_magnuspinnatus
ENSPTRG00000023558	C1D	99	82.270	ENSPCIG00000018629	-	99	82.270	Phascolarctos_cinereus
ENSPTRG00000023558	C1D	100	76.596	ENSPCIG00000006831	-	98	76.596	Phascolarctos_cinereus
ENSPTRG00000023558	C1D	96	64.706	ENSPFOG00000003686	c1d	88	64.706	Poecilia_formosa
ENSPTRG00000023558	C1D	96	64.706	ENSPLAG00000000228	c1d	96	64.706	Poecilia_latipinna
ENSPTRG00000023558	C1D	96	64.706	ENSPMEG00000023213	c1d	88	64.706	Poecilia_mexicana
ENSPTRG00000023558	C1D	100	63.830	ENSPREG00000000742	c1d	99	63.830	Poecilia_reticulata
ENSPTRG00000023558	C1D	100	92.199	ENSPPYG00000002294	-	100	92.199	Pongo_abelii
ENSPTRG00000023558	C1D	100	100.000	ENSPPYG00000012354	C1D	80	99.315	Pongo_abelii
ENSPTRG00000023558	C1D	100	85.816	ENSPCAG00000010088	C1D	100	78.889	Procavia_capensis
ENSPTRG00000023558	C1D	100	96.454	ENSPCOG00000016112	C1D	100	96.454	Propithecus_coquereli
ENSPTRG00000023558	C1D	100	97.163	ENSPVAG00000012692	C1D	98	88.636	Pteropus_vampyrus
ENSPTRG00000023558	C1D	82	67.241	ENSPNYG00000008789	c1d	92	61.940	Pundamilia_nyererei
ENSPTRG00000023558	C1D	99	63.636	ENSPNAG00000004219	c1d	98	63.636	Pygocentrus_nattereri
ENSPTRG00000023558	C1D	99	92.143	ENSRNOG00000005982	C1d	99	92.143	Rattus_norvegicus
ENSPTRG00000023558	C1D	100	95.035	ENSRBIG00000026211	-	100	95.035	Rhinopithecus_bieti
ENSPTRG00000023558	C1D	100	95.035	ENSRROG00000005944	-	100	95.035	Rhinopithecus_roxellana
ENSPTRG00000023558	C1D	100	99.291	ENSRROG00000029013	C1D	100	99.291	Rhinopithecus_roxellana
ENSPTRG00000023558	C1D	100	100.000	ENSSBOG00000025275	C1D	100	100.000	Saimiri_boliviensis_boliviensis
ENSPTRG00000023558	C1D	99	81.560	ENSSHAG00000008352	C1D	68	81.560	Sarcophilus_harrisii
ENSPTRG00000023558	C1D	88	68.800	ENSSFOG00015010861	c1d	89	68.800	Scleropages_formosus
ENSPTRG00000023558	C1D	99	59.712	ENSSMAG00000019230	c1d	90	59.712	Scophthalmus_maximus
ENSPTRG00000023558	C1D	94	65.152	ENSSDUG00000020213	c1d	85	65.152	Seriola_dumerili
ENSPTRG00000023558	C1D	99	62.590	ENSSLDG00000017371	c1d	90	62.590	Seriola_lalandi_dorsalis
ENSPTRG00000023558	C1D	89	80.159	ENSSPUG00000006525	C1D	92	77.037	Sphenodon_punctatus
ENSPTRG00000023558	C1D	92	66.923	ENSSPAG00000008574	c1d	90	64.748	Stegastes_partitus
ENSPTRG00000023558	C1D	100	97.872	ENSSSCG00000039331	-	100	97.872	Sus_scrofa
ENSPTRG00000023558	C1D	85	75.833	ENSSSCG00000035701	-	100	75.833	Sus_scrofa
ENSPTRG00000023558	C1D	93	81.203	ENSTGUG00000002367	C1D	92	81.203	Taeniopygia_guttata
ENSPTRG00000023558	C1D	96	60.714	ENSTRUG00000012245	c1d	84	60.714	Takifugu_rubripes
ENSPTRG00000023558	C1D	99	61.429	ENSTNIG00000009827	c1d	95	61.429	Tetraodon_nigroviridis
ENSPTRG00000023558	C1D	100	95.745	ENSTBEG00000009797	C1D	100	95.745	Tupaia_belangeri
ENSPTRG00000023558	C1D	100	97.872	ENSTTRG00000013982	C1D	100	86.034	Tursiops_truncatus
ENSPTRG00000023558	C1D	100	84.028	ENSUAMG00000025246	C1D	100	84.028	Ursus_americanus
ENSPTRG00000023558	C1D	100	98.582	ENSUMAG00000021118	-	100	98.582	Ursus_maritimus
ENSPTRG00000023558	C1D	72	75.000	ENSUMAG00000006451	-	91	74.561	Ursus_maritimus
ENSPTRG00000023558	C1D	100	95.745	ENSVPAG00000012080	C1D	100	84.444	Vicugna_pacos
ENSPTRG00000023558	C1D	100	95.745	ENSVVUG00000027629	C1D	91	95.205	Vulpes_vulpes
ENSPTRG00000023558	C1D	99	70.213	ENSXETG00000025934	c1d	97	70.213	Xenopus_tropicalis
ENSPTRG00000023558	C1D	89	66.400	ENSXCOG00000013813	c1d	88	63.971	Xiphophorus_couchianus
ENSPTRG00000023558	C1D	89	65.600	ENSXMAG00000022273	c1d	88	63.235	Xiphophorus_maculatus