EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPTRG00000023787 (Gene tree)
Gene ID: 473959
Gene Symbol: SYNJ1
Alias: -
Full Name: synaptojanin 1
Gene Type: protein_coding
Species: Pan_troglodytes
Status: putative
Strand: Minus strand
Length: 99393 bases
Position: chr21:19068225-19167617
Accession: 1122
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTRP00000088145	Exo_endo_phos	PF03372.23	1.3e-14	1	1
ENSPTRP00000061600	Exo_endo_phos	PF03372.23	1.4e-14	1	1
ENSPTRP00000083649	Exo_endo_phos	PF03372.23	1.5e-14	1	1
ENSPTRP00000090944	Exo_endo_phos	PF03372.23	1.9e-14	1	1
ENSPTRP00000053992	Exo_endo_phos	PF03372.23	2e-14	1	1
ENSPTRP00000088145	DUF1866	PF08952.11	6.8e-60	1	1
ENSPTRP00000061600	DUF1866	PF08952.11	7e-60	1	1
ENSPTRP00000083649	DUF1866	PF08952.11	7.5e-60	1	1
ENSPTRP00000090944	DUF1866	PF08952.11	7.8e-60	1	1
ENSPTRP00000053992	DUF1866	PF08952.11	8e-60	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTRT00000101224	-	8157	XM_003319043	ENSPTRP00000088145	1264 (aa)	XP_003319091	A0A2I3RG40
ENSPTRT00000045636	-	8264	XM_009452816	ENSPTRP00000053992	1614 (aa)	XP_016793951	H2RAJ6
ENSPTRT00000099001	-	8240	XM_003319044	ENSPTRP00000061600	1295 (aa)	XP_003319092	A0A2I3RAF6
ENSPTRT00000109823	-	4758	XM_016938467	ENSPTRP00000090944	1585 (aa)	XP_016793956	A0A2I3TNZ5
ENSPTRT00000080995	-	8298	XM_003319045	ENSPTRP00000083649	1350 (aa)	XP_003319093	A0A2I3T361

Gene Model

Click here to download ENSPTRG00000023787's gene model file

Pathways

Pathway ID	Pathway Name	Source
ptr00562	Inositol phosphate metabolism	KEGG
ptr01100	Metabolic pathways	KEGG
ptr04070	Phosphatidylinositol signaling system	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000023787's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPTRG00000023787	SYNJ1	100	100.000	ENSPTRG00000048135	-	100	100.000
ENSPTRG00000023787	SYNJ1	99	48.012	ENSPTRG00000018739	SYNJ2	85	53.568

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTRG00000023787	SYNJ1	100	99.923	ENSG00000159082	SYNJ1	100	100.000	Homo_sapiens
ENSPTRG00000023787	SYNJ1	92	75.515	ENSAPOG00000002809	synj1	98	69.715	Acanthochromis_polyacanthus
ENSPTRG00000023787	SYNJ1	99	95.610	ENSAMEG00000015028	SYNJ1	100	93.556	Ailuropoda_melanoleuca
ENSPTRG00000023787	SYNJ1	99	67.700	ENSACIG00000008857	synj1	95	68.944	Amphilophus_citrinellus
ENSPTRG00000023787	SYNJ1	99	68.433	ENSAOCG00000009835	synj1	100	68.125	Amphiprion_ocellaris
ENSPTRG00000023787	SYNJ1	85	75.634	ENSAPEG00000021010	synj1	87	64.821	Amphiprion_percula
ENSPTRG00000023787	SYNJ1	99	69.506	ENSATEG00000002306	synj1	87	62.780	Anabas_testudineus
ENSPTRG00000023787	SYNJ1	100	83.952	ENSAPLG00000011832	SYNJ1	100	79.321	Anas_platyrhynchos
ENSPTRG00000023787	SYNJ1	100	83.105	ENSACAG00000003006	-	100	84.030	Anolis_carolinensis
ENSPTRG00000023787	SYNJ1	100	99.074	ENSANAG00000027325	SYNJ1	100	99.074	Aotus_nancymaae
ENSPTRG00000023787	SYNJ1	98	70.463	ENSACLG00000002255	synj1	100	69.276	Astatotilapia_calliptera
ENSPTRG00000023787	SYNJ1	99	70.401	ENSAMXG00000008208	synj1	95	61.408	Astyanax_mexicanus
ENSPTRG00000023787	SYNJ1	99	93.755	ENSBTAG00000003063	SYNJ1	100	93.783	Bos_taurus
ENSPTRG00000023787	SYNJ1	100	99.074	ENSCJAG00000009187	SYNJ1	100	99.074	Callithrix_jacchus
ENSPTRG00000023787	SYNJ1	99	94.762	ENSCAFG00000009041	SYNJ1	99	94.762	Canis_familiaris
ENSPTRG00000023787	SYNJ1	99	95.628	ENSCAFG00020025776	SYNJ1	100	89.994	Canis_lupus_dingo
ENSPTRG00000023787	SYNJ1	99	94.436	ENSCHIG00000005095	SYNJ1	100	89.871	Capra_hircus
ENSPTRG00000023787	SYNJ1	100	96.834	ENSTSYG00000014541	SYNJ1	100	96.834	Carlito_syrichta
ENSPTRG00000023787	SYNJ1	97	77.262	ENSCAPG00000014483	SYNJ1	99	80.034	Cavia_aperea
ENSPTRG00000023787	SYNJ1	100	93.669	ENSCPOG00000012182	SYNJ1	100	94.813	Cavia_porcellus
ENSPTRG00000023787	SYNJ1	100	98.920	ENSCCAG00000020825	SYNJ1	100	98.920	Cebus_capucinus
ENSPTRG00000023787	SYNJ1	100	99.288	ENSCATG00000033891	SYNJ1	100	99.288	Cercocebus_atys
ENSPTRG00000023787	SYNJ1	100	94.508	ENSCLAG00000009796	SYNJ1	100	98.413	Chinchilla_lanigera
ENSPTRG00000023787	SYNJ1	100	98.017	ENSCSAG00000009654	SYNJ1	100	99.237	Chlorocebus_sabaeus
ENSPTRG00000023787	SYNJ1	83	92.508	ENSCHOG00000012390	SYNJ1	87	92.508	Choloepus_hoffmanni
ENSPTRG00000023787	SYNJ1	95	86.474	ENSCPBG00000006402	SYNJ1	100	86.552	Chrysemys_picta_bellii
ENSPTRG00000023787	SYNJ1	100	99.382	ENSCANG00000031359	SYNJ1	100	99.382	Colobus_angolensis_palliatus
ENSPTRG00000023787	SYNJ1	99	93.720	ENSCGRG00001010861	Synj1	100	93.822	Cricetulus_griseus_chok1gshd
ENSPTRG00000023787	SYNJ1	100	92.677	ENSCGRG00000015749	Synj1	100	96.825	Cricetulus_griseus_crigri
ENSPTRG00000023787	SYNJ1	86	75.453	ENSCSEG00000019614	synj1	99	71.250	Cynoglossus_semilaevis
ENSPTRG00000023787	SYNJ1	86	73.381	ENSCVAG00000019250	synj1	100	66.667	Cyprinodon_variegatus
ENSPTRG00000023787	SYNJ1	86	77.413	ENSDARG00000025011	synj1	100	71.514	Danio_rerio
ENSPTRG00000023787	SYNJ1	98	89.682	ENSDNOG00000010732	SYNJ1	99	87.099	Dasypus_novemcinctus
ENSPTRG00000023787	SYNJ1	55	98.124	ENSDORG00000014735	-	100	98.124	Dipodomys_ordii
ENSPTRG00000023787	SYNJ1	86	94.872	ENSETEG00000018674	SYNJ1	79	95.652	Echinops_telfairi
ENSPTRG00000023787	SYNJ1	99	95.246	ENSEASG00005006287	SYNJ1	98	95.912	Equus_asinus_asinus
ENSPTRG00000023787	SYNJ1	99	95.516	ENSECAG00000004829	SYNJ1	100	95.411	Equus_caballus
ENSPTRG00000023787	SYNJ1	90	89.681	ENSEEUG00000005150	SYNJ1	95	89.681	Erinaceus_europaeus
ENSPTRG00000023787	SYNJ1	99	66.926	ENSELUG00000009731	synj1	90	67.633	Esox_lucius
ENSPTRG00000023787	SYNJ1	99	95.997	ENSFCAG00000012498	SYNJ1	100	95.455	Felis_catus
ENSPTRG00000023787	SYNJ1	74	76.813	ENSFALG00000004680	SYNJ1	100	71.577	Ficedula_albicollis
ENSPTRG00000023787	SYNJ1	100	94.355	ENSFDAG00000016818	SYNJ1	100	98.413	Fukomys_damarensis
ENSPTRG00000023787	SYNJ1	99	68.945	ENSFHEG00000017689	synj1	89	63.473	Fundulus_heteroclitus
ENSPTRG00000023787	SYNJ1	79	72.890	ENSGMOG00000014852	synj1	77	72.915	Gadus_morhua
ENSPTRG00000023787	SYNJ1	100	85.918	ENSGALG00000034317	SYNJ1	100	78.608	Gallus_gallus
ENSPTRG00000023787	SYNJ1	99	69.423	ENSGAFG00000019466	synj1	89	63.575	Gambusia_affinis
ENSPTRG00000023787	SYNJ1	99	62.726	ENSGACG00000020575	synj1	93	65.721	Gasterosteus_aculeatus
ENSPTRG00000023787	SYNJ1	100	86.310	ENSGAGG00000022523	SYNJ1	100	85.511	Gopherus_agassizii
ENSPTRG00000023787	SYNJ1	100	99.604	ENSGGOG00000015945	SYNJ1	100	99.604	Gorilla_gorilla
ENSPTRG00000023787	SYNJ1	97	70.644	ENSHBUG00000007774	synj1	100	69.276	Haplochromis_burtoni
ENSPTRG00000023787	SYNJ1	100	93.974	ENSHGLG00000006420	SYNJ1	100	98.413	Heterocephalus_glaber_female
ENSPTRG00000023787	SYNJ1	99	93.946	ENSHGLG00100012591	SYNJ1	100	98.413	Heterocephalus_glaber_male
ENSPTRG00000023787	SYNJ1	99	66.119	ENSHCOG00000012774	synj1	96	66.064	Hippocampus_comes
ENSPTRG00000023787	SYNJ1	99	70.958	ENSIPUG00000010691	SYNJ1	96	62.246	Ictalurus_punctatus
ENSPTRG00000023787	SYNJ1	100	95.271	ENSSTOG00000015806	SYNJ1	100	96.491	Ictidomys_tridecemlineatus
ENSPTRG00000023787	SYNJ1	98	88.144	ENSJJAG00000020168	Synj1	100	85.850	Jaculus_jaculus
ENSPTRG00000023787	SYNJ1	89	73.619	ENSKMAG00000004221	synj1	94	73.213	Kryptolebias_marmoratus
ENSPTRG00000023787	SYNJ1	99	69.922	ENSLBEG00000015081	synj1	95	67.255	Labrus_bergylta
ENSPTRG00000023787	SYNJ1	99	76.042	ENSLACG00000005928	SYNJ1	98	69.800	Latimeria_chalumnae
ENSPTRG00000023787	SYNJ1	100	76.324	ENSLOCG00000009230	synj1	100	70.125	Lepisosteus_oculatus
ENSPTRG00000023787	SYNJ1	99	93.793	ENSLAFG00000011806	SYNJ1	99	90.013	Loxodonta_africana
ENSPTRG00000023787	SYNJ1	98	98.498	ENSMFAG00000018883	SYNJ1	99	98.517	Macaca_fascicularis
ENSPTRG00000023787	SYNJ1	100	97.869	ENSMMUG00000004624	SYNJ1	100	99.087	Macaca_mulatta
ENSPTRG00000023787	SYNJ1	99	99.364	ENSMNEG00000040077	SYNJ1	100	98.017	Macaca_nemestrina
ENSPTRG00000023787	SYNJ1	100	99.382	ENSMLEG00000037029	SYNJ1	100	99.382	Mandrillus_leucophaeus
ENSPTRG00000023787	SYNJ1	99	69.697	ENSMAMG00000013404	synj1	89	63.896	Mastacembelus_armatus
ENSPTRG00000023787	SYNJ1	97	71.120	ENSMZEG00005024358	synj1	100	69.814	Maylandia_zebra
ENSPTRG00000023787	SYNJ1	100	83.459	ENSMGAG00000014522	SYNJ1	100	79.410	Meleagris_gallopavo
ENSPTRG00000023787	SYNJ1	100	92.449	ENSMAUG00000009743	Synj1	100	96.537	Mesocricetus_auratus
ENSPTRG00000023787	SYNJ1	100	97.468	ENSMICG00000034953	SYNJ1	100	97.468	Microcebus_murinus
ENSPTRG00000023787	SYNJ1	89	73.288	ENSMMOG00000010203	synj1	99	67.629	Mola_mola
ENSPTRG00000023787	SYNJ1	99	80.323	ENSMODG00000021073	SYNJ1	100	80.927	Monodelphis_domestica
ENSPTRG00000023787	SYNJ1	99	68.666	ENSMALG00000014015	synj1	88	65.989	Monopterus_albus
ENSPTRG00000023787	SYNJ1	100	92.759	MGP_CAROLIEiJ_G0020951	Synj1	100	97.403	Mus_caroli
ENSPTRG00000023787	SYNJ1	100	92.835	ENSMUSG00000022973	Synj1	100	97.691	Mus_musculus
ENSPTRG00000023787	SYNJ1	100	92.988	MGP_PahariEiJ_G0016656	Synj1	100	97.691	Mus_pahari
ENSPTRG00000023787	SYNJ1	100	92.835	MGP_SPRETEiJ_G0021857	Synj1	100	97.691	Mus_spretus
ENSPTRG00000023787	SYNJ1	99	93.826	ENSMPUG00000001153	SYNJ1	100	91.909	Mustela_putorius_furo
ENSPTRG00000023787	SYNJ1	53	94.925	ENSMLUG00000026584	-	100	94.963	Myotis_lucifugus
ENSPTRG00000023787	SYNJ1	61	82.742	ENSMLUG00000005764	-	100	76.155	Myotis_lucifugus
ENSPTRG00000023787	SYNJ1	100	93.898	ENSNGAG00000000453	Synj1	100	97.547	Nannospalax_galili
ENSPTRG00000023787	SYNJ1	86	72.562	ENSNBRG00000011936	synj1	95	59.572	Neolamprologus_brichardi
ENSPTRG00000023787	SYNJ1	87	99.298	ENSNLEG00000003734	SYNJ1	100	96.894	Nomascus_leucogenys
ENSPTRG00000023787	SYNJ1	88	76.429	ENSMEUG00000004158	-	78	77.533	Notamacropus_eugenii
ENSPTRG00000023787	SYNJ1	91	93.780	ENSOPRG00000013602	SYNJ1	93	93.780	Ochotona_princeps
ENSPTRG00000023787	SYNJ1	55	98.124	ENSODEG00000002409	-	100	98.124	Octodon_degus
ENSPTRG00000023787	SYNJ1	99	70.161	ENSONIG00000004667	synj1	100	67.641	Oreochromis_niloticus
ENSPTRG00000023787	SYNJ1	97	83.708	ENSOANG00000006929	SYNJ1	97	78.468	Ornithorhynchus_anatinus
ENSPTRG00000023787	SYNJ1	99	92.332	ENSOCUG00000001420	SYNJ1	100	88.530	Oryctolagus_cuniculus
ENSPTRG00000023787	SYNJ1	86	75.136	ENSORLG00000004320	synj1	100	68.745	Oryzias_latipes
ENSPTRG00000023787	SYNJ1	86	73.412	ENSORLG00020011994	synj1	97	66.515	Oryzias_latipes_hni
ENSPTRG00000023787	SYNJ1	86	75.777	ENSORLG00015018077	synj1	95	58.537	Oryzias_latipes_hsok
ENSPTRG00000023787	SYNJ1	86	76.325	ENSOMEG00000014322	synj1	99	67.063	Oryzias_melastigma
ENSPTRG00000023787	SYNJ1	100	91.753	ENSOGAG00000006010	SYNJ1	100	90.450	Otolemur_garnettii
ENSPTRG00000023787	SYNJ1	99	92.226	ENSOARG00000013414	SYNJ1	100	88.745	Ovis_aries
ENSPTRG00000023787	SYNJ1	100	100.000	ENSPPAG00000026784	SYNJ1	100	100.000	Pan_paniscus
ENSPTRG00000023787	SYNJ1	99	95.997	ENSPPRG00000023469	SYNJ1	100	95.455	Panthera_pardus
ENSPTRG00000023787	SYNJ1	99	95.917	ENSPTIG00000007930	SYNJ1	100	95.378	Panthera_tigris_altaica
ENSPTRG00000023787	SYNJ1	100	99.382	ENSPANG00000022531	SYNJ1	100	99.390	Papio_anubis
ENSPTRG00000023787	SYNJ1	89	77.931	ENSPKIG00000022603	synj1	95	76.891	Paramormyrops_kingsleyae
ENSPTRG00000023787	SYNJ1	86	76.325	ENSPMGG00000016831	synj1	93	75.362	Periophthalmus_magnuspinnatus
ENSPTRG00000023787	SYNJ1	100	92.830	ENSPEMG00000018767	Synj1	100	96.970	Peromyscus_maniculatus_bairdii
ENSPTRG00000023787	SYNJ1	81	60.903	ENSPMAG00000002887	synj1	96	53.492	Petromyzon_marinus
ENSPTRG00000023787	SYNJ1	99	87.816	ENSPCIG00000016372	SYNJ1	100	87.273	Phascolarctos_cinereus
ENSPTRG00000023787	SYNJ1	100	68.300	ENSPFOG00000016886	synj1	100	67.006	Poecilia_formosa
ENSPTRG00000023787	SYNJ1	99	69.057	ENSPLAG00000017559	synj1	100	65.313	Poecilia_latipinna
ENSPTRG00000023787	SYNJ1	99	69.358	ENSPMEG00000007643	synj1	89	63.734	Poecilia_mexicana
ENSPTRG00000023787	SYNJ1	99	69.985	ENSPREG00000012412	synj1	99	67.788	Poecilia_reticulata
ENSPTRG00000023787	SYNJ1	99	98.889	ENSPPYG00000011365	SYNJ1	98	98.908	Pongo_abelii
ENSPTRG00000023787	SYNJ1	87	94.286	ENSPCAG00000009906	SYNJ1	89	94.286	Procavia_capensis
ENSPTRG00000023787	SYNJ1	97	91.874	ENSPCOG00000024841	SYNJ1	100	91.874	Propithecus_coquereli
ENSPTRG00000023787	SYNJ1	99	88.889	ENSPVAG00000000892	SYNJ1	100	87.492	Pteropus_vampyrus
ENSPTRG00000023787	SYNJ1	86	74.703	ENSPNYG00000022989	synj1	100	67.262	Pundamilia_nyererei
ENSPTRG00000023787	SYNJ1	87	77.021	ENSPNAG00000021119	synj1	92	76.365	Pygocentrus_nattereri
ENSPTRG00000023787	SYNJ1	100	93.977	ENSRNOG00000002051	Synj1	100	93.977	Rattus_norvegicus
ENSPTRG00000023787	SYNJ1	100	99.228	ENSRBIG00000034477	SYNJ1	100	99.228	Rhinopithecus_bieti
ENSPTRG00000023787	SYNJ1	100	99.382	ENSRROG00000039256	SYNJ1	100	99.382	Rhinopithecus_roxellana
ENSPTRG00000023787	SYNJ1	100	98.843	ENSSBOG00000021001	SYNJ1	100	98.843	Saimiri_boliviensis_boliviensis
ENSPTRG00000023787	SYNJ1	99	85.769	ENSSHAG00000008538	SYNJ1	99	78.715	Sarcophilus_harrisii
ENSPTRG00000023787	SYNJ1	100	71.979	ENSSFOG00015006095	synj1	95	64.566	Scleropages_formosus
ENSPTRG00000023787	SYNJ1	99	68.576	ENSSMAG00000018066	synj1	95	69.219	Scophthalmus_maximus
ENSPTRG00000023787	SYNJ1	86	76.524	ENSSDUG00000013058	synj1	88	63.109	Seriola_dumerili
ENSPTRG00000023787	SYNJ1	100	67.586	ENSSLDG00000021406	synj1	96	71.096	Seriola_lalandi_dorsalis
ENSPTRG00000023787	SYNJ1	69	97.368	ENSSARG00000009490	SYNJ1	75	97.368	Sorex_araneus
ENSPTRG00000023787	SYNJ1	100	86.166	ENSSPUG00000012552	SYNJ1	100	77.465	Sphenodon_punctatus
ENSPTRG00000023787	SYNJ1	99	68.115	ENSSPAG00000017029	synj1	95	67.123	Stegastes_partitus
ENSPTRG00000023787	SYNJ1	86	75.069	ENSSPAG00000006812	SYNJ1	95	58.521	Stegastes_partitus
ENSPTRG00000023787	SYNJ1	100	94.014	ENSSSCG00000012035	SYNJ1	100	94.167	Sus_scrofa
ENSPTRG00000023787	SYNJ1	100	83.182	ENSTGUG00000013445	SYNJ1	100	77.925	Taeniopygia_guttata
ENSPTRG00000023787	SYNJ1	99	68.185	ENSTRUG00000006907	synj1	96	68.538	Takifugu_rubripes
ENSPTRG00000023787	SYNJ1	99	68.206	ENSTNIG00000009940	synj1	100	65.525	Tetraodon_nigroviridis
ENSPTRG00000023787	SYNJ1	91	86.858	ENSTBEG00000016298	SYNJ1	92	87.648	Tupaia_belangeri
ENSPTRG00000023787	SYNJ1	99	84.414	ENSTTRG00000002222	SYNJ1	100	82.761	Tursiops_truncatus
ENSPTRG00000023787	SYNJ1	99	96.346	ENSUAMG00000018606	SYNJ1	99	98.117	Ursus_americanus
ENSPTRG00000023787	SYNJ1	99	96.187	ENSUMAG00000018419	SYNJ1	99	98.117	Ursus_maritimus
ENSPTRG00000023787	SYNJ1	85	100.000	ENSVPAG00000001241	SYNJ1	87	100.000	Vicugna_pacos
ENSPTRG00000023787	SYNJ1	100	94.584	ENSVVUG00000023125	SYNJ1	100	95.652	Vulpes_vulpes
ENSPTRG00000023787	SYNJ1	100	77.636	ENSXETG00000009899	synj1	100	68.580	Xenopus_tropicalis
ENSPTRG00000023787	SYNJ1	86	75.862	ENSXCOG00000011896	synj1	99	68.851	Xiphophorus_couchianus
ENSPTRG00000023787	SYNJ1	100	67.461	ENSXMAG00000017524	synj1	100	68.584	Xiphophorus_maculatus