EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPTRG00000028313 (Gene tree)
Gene ID: 473531
Gene Symbol: DDX53
Alias: -
Full Name: DEAD-box helicase 53
Gene Type: protein_coding
Species: Pan_troglodytes
Status: putative
Strand: Plus strand
Length: 1896 bases
Position: chrX:23126355-23128250
Accession: 12289
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTRP00000047475	KH_1	PF00013.29	6.8e-12	1	1
ENSPTRP00000047475	DEAD	PF00270.29	4.9e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTRT00000055063	-	1896	XM_009438859	ENSPTRP00000047475	631 (aa)	XP_009437134	H2R4S8

Gene Model

Click here to download ENSPTRG00000028313's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000028313's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPTRG00000028313	DDX53	55	30.086	ENSPTRG00000009737	EIF4A3	83	30.086
ENSPTRG00000028313	DDX53	57	36.290	ENSPTRG00000016884	DDX4	64	36.290
ENSPTRG00000028313	DDX53	61	34.673	ENSPTRG00000017589	DDX41	63	34.673
ENSPTRG00000028313	DDX53	60	35.354	ENSPTRG00000022488	DDX3Y	63	35.354
ENSPTRG00000028313	DDX53	69	41.667	ENSPTRG00000009543	DDX5	77	41.667
ENSPTRG00000028313	DDX53	56	30.579	ENSPTRG00000002562	DDX50	51	30.579
ENSPTRG00000028313	DDX53	61	33.250	ENSPTRG00000051972	-	53	33.250
ENSPTRG00000028313	DDX53	57	36.148	ENSPTRG00000049651	DDX3X	62	35.859
ENSPTRG00000028313	DDX53	99	61.502	ENSPTRG00000018344	DDX43	96	61.502
ENSPTRG00000028313	DDX53	71	34.956	ENSPTRG00000009523	DDX42	62	34.735
ENSPTRG00000028313	DDX53	56	32.312	ENSPTRG00000004353	DDX6	70	32.665
ENSPTRG00000028313	DDX53	59	32.982	ENSPTRG00000001821	DDX59	60	32.982
ENSPTRG00000028313	DDX53	65	37.162	ENSPTRG00000004887	DDX23	91	37.500
ENSPTRG00000028313	DDX53	62	34.005	ENSPTRG00000033743	DDX47	85	34.005
ENSPTRG00000028313	DDX53	70	42.152	ENSPTRG00000014369	DDX17	87	42.513
ENSPTRG00000028313	DDX53	54	33.239	ENSPTRG00000010725	DDX49	71	33.239
ENSPTRG00000028313	DDX53	66	30.345	ENSPTRG00000009058	DDX52	72	30.973
ENSPTRG00000028313	DDX53	56	30.052	ENSPTRG00000008258	DDX28	70	30.052

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTRG00000028313	DDX53	100	96.513	ENSG00000184735	DDX53	100	96.513	Homo_sapiens
ENSPTRG00000028313	DDX53	99	80.573	ENSCCAG00000021534	-	100	80.573	Cebus_capucinus
ENSPTRG00000028313	DDX53	99	80.573	ENSCCAG00000024171	-	100	80.573	Cebus_capucinus
ENSPTRG00000028313	DDX53	99	88.076	ENSCSAG00000019540	DDX53	99	88.076	Chlorocebus_sabaeus
ENSPTRG00000028313	DDX53	100	99.683	ENSPPAG00000006869	DDX53	100	99.683	Pan_paniscus
ENSPTRG00000028313	DDX53	99	92.687	ENSPPYG00000020185	DDX53	100	92.687	Pongo_abelii