EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPTRG00000030609 (Gene tree)
Gene ID: 458125
Gene Symbol: CRNKL1
Alias: -
Full Name: crooked neck pre-mRNA splicing factor 1
Gene Type: protein_coding
Species: Pan_troglodytes
Status: putative
Strand: Minus strand
Length: 18267 bases
Position: chr20:20060060-20078326
Accession: 6084
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTRP00000052333	Suf	PF05843.14	7.9e-12	1	1
ENSPTRP00000052333	HAT	PF02184.16	1.3e-42	1	2
ENSPTRP00000052333	HAT	PF02184.16	1.3e-42	2	2
ENSPTRP00000063942	HAT	PF02184.16	1.8e-30	1	2
ENSPTRP00000063942	HAT	PF02184.16	1.8e-30	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTRT00000059221	-	4247	XM_009436903	ENSPTRP00000052333	687 (aa)	XP_009435178	H2R934
ENSPTRT00000100209	-	2022	-	ENSPTRP00000063942	673 (aa)	-	A0A2I3RH37

Gene Model

Click here to download ENSPTRG00000030609's gene model file

Pathways

Pathway ID	Pathway Name	Source
ptr03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000030609's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTRG00000030609	CRNKL1	100	99.854	ENSG00000101343	CRNKL1	100	99.854	Homo_sapiens
ENSPTRG00000030609	CRNKL1	99	85.985	ENSAPOG00000009705	crnkl1	98	85.735	Acanthochromis_polyacanthus
ENSPTRG00000030609	CRNKL1	100	96.943	ENSAMEG00000000270	CRNKL1	83	96.943	Ailuropoda_melanoleuca
ENSPTRG00000030609	CRNKL1	97	86.787	ENSACIG00000015267	crnkl1	89	86.787	Amphilophus_citrinellus
ENSPTRG00000030609	CRNKL1	99	86.131	ENSAOCG00000021964	crnkl1	91	86.131	Amphiprion_ocellaris
ENSPTRG00000030609	CRNKL1	99	85.985	ENSAPEG00000015041	crnkl1	91	85.985	Amphiprion_percula
ENSPTRG00000030609	CRNKL1	99	85.735	ENSATEG00000001068	crnkl1	89	85.735	Anabas_testudineus
ENSPTRG00000030609	CRNKL1	99	90.393	ENSAPLG00000013105	CRNKL1	99	90.393	Anas_platyrhynchos
ENSPTRG00000030609	CRNKL1	99	92.533	ENSACAG00000005284	CRNKL1	99	92.533	Anolis_carolinensis
ENSPTRG00000030609	CRNKL1	92	99.051	ENSANAG00000024889	CRNKL1	100	99.051	Aotus_nancymaae
ENSPTRG00000030609	CRNKL1	99	86.854	ENSACLG00000010813	crnkl1	90	86.854	Astatotilapia_calliptera
ENSPTRG00000030609	CRNKL1	97	87.349	ENSAMXG00000018334	crnkl1	92	86.131	Astyanax_mexicanus
ENSPTRG00000030609	CRNKL1	100	96.361	ENSBTAG00000008472	CRNKL1	99	96.361	Bos_taurus
ENSPTRG00000030609	CRNKL1	93	62.830	WBGene00019762	M03F8.3	90	62.351	Caenorhabditis_elegans
ENSPTRG00000030609	CRNKL1	100	98.981	ENSCJAG00000005393	CRNKL1	100	98.981	Callithrix_jacchus
ENSPTRG00000030609	CRNKL1	100	96.652	ENSCAFG00000005333	CRNKL1	94	96.652	Canis_familiaris
ENSPTRG00000030609	CRNKL1	100	96.652	ENSCAFG00020027488	CRNKL1	100	96.652	Canis_lupus_dingo
ENSPTRG00000030609	CRNKL1	100	95.342	ENSCHIG00000013171	CRNKL1	99	95.342	Capra_hircus
ENSPTRG00000030609	CRNKL1	100	97.962	ENSTSYG00000004197	CRNKL1	100	97.962	Carlito_syrichta
ENSPTRG00000030609	CRNKL1	95	94.992	ENSCAPG00000010501	CRNKL1	99	94.992	Cavia_aperea
ENSPTRG00000030609	CRNKL1	100	95.342	ENSCPOG00000004418	CRNKL1	100	95.342	Cavia_porcellus
ENSPTRG00000030609	CRNKL1	100	98.981	ENSCCAG00000027037	CRNKL1	100	98.981	Cebus_capucinus
ENSPTRG00000030609	CRNKL1	100	99.563	ENSCATG00000034247	CRNKL1	100	99.563	Cercocebus_atys
ENSPTRG00000030609	CRNKL1	100	95.779	ENSCLAG00000013859	CRNKL1	100	95.779	Chinchilla_lanigera
ENSPTRG00000030609	CRNKL1	100	99.563	ENSCSAG00000011434	CRNKL1	100	99.563	Chlorocebus_sabaeus
ENSPTRG00000030609	CRNKL1	100	96.215	ENSCHOG00000006371	CRNKL1	84	96.215	Choloepus_hoffmanni
ENSPTRG00000030609	CRNKL1	99	92.993	ENSCPBG00000023501	CRNKL1	99	92.993	Chrysemys_picta_bellii
ENSPTRG00000030609	CRNKL1	96	70.091	ENSCING00000002709	-	99	68.567	Ciona_intestinalis
ENSPTRG00000030609	CRNKL1	100	99.418	ENSCANG00000038789	CRNKL1	100	99.418	Colobus_angolensis_palliatus
ENSPTRG00000030609	CRNKL1	100	96.361	ENSCGRG00001001115	-	99	96.361	Cricetulus_griseus_chok1gshd
ENSPTRG00000030609	CRNKL1	100	96.361	ENSCGRG00001000687	-	99	96.361	Cricetulus_griseus_chok1gshd
ENSPTRG00000030609	CRNKL1	100	96.361	ENSCGRG00000007854	Crnkl1	99	96.361	Cricetulus_griseus_crigri
ENSPTRG00000030609	CRNKL1	99	85.862	ENSCSEG00000005594	crnkl1	86	85.862	Cynoglossus_semilaevis
ENSPTRG00000030609	CRNKL1	97	86.787	ENSCVAG00000015172	crnkl1	92	84.964	Cyprinodon_variegatus
ENSPTRG00000030609	CRNKL1	96	86.556	ENSDARG00000007901	crnkl1	91	84.942	Danio_rerio
ENSPTRG00000030609	CRNKL1	99	96.784	ENSDNOG00000016226	CRNKL1	95	96.784	Dasypus_novemcinctus
ENSPTRG00000030609	CRNKL1	99	85.944	ENSDORG00000030174	-	99	85.944	Dipodomys_ordii
ENSPTRG00000030609	CRNKL1	99	86.384	ENSDORG00000023724	-	99	86.384	Dipodomys_ordii
ENSPTRG00000030609	CRNKL1	100	94.517	ENSDORG00000000394	-	100	94.517	Dipodomys_ordii
ENSPTRG00000030609	CRNKL1	97	69.300	FBgn0000377	crn	96	69.300	Drosophila_melanogaster
ENSPTRG00000030609	CRNKL1	100	84.279	ENSETEG00000003711	CRNKL1	84	84.279	Echinops_telfairi
ENSPTRG00000030609	CRNKL1	99	60.558	ENSEBUG00000013461	crnkl1	96	57.833	Eptatretus_burgeri
ENSPTRG00000030609	CRNKL1	100	96.798	ENSEASG00005002072	CRNKL1	100	96.798	Equus_asinus_asinus
ENSPTRG00000030609	CRNKL1	100	96.798	ENSECAG00000022215	CRNKL1	100	96.798	Equus_caballus
ENSPTRG00000030609	CRNKL1	99	93.676	ENSEEUG00000000413	CRNKL1	92	93.741	Erinaceus_europaeus
ENSPTRG00000030609	CRNKL1	97	85.329	ENSELUG00000015424	crnkl1	97	84.357	Esox_lucius
ENSPTRG00000030609	CRNKL1	100	96.943	ENSFCAG00000000714	CRNKL1	100	96.943	Felis_catus
ENSPTRG00000030609	CRNKL1	98	91.518	ENSFALG00000004611	CRNKL1	100	91.518	Ficedula_albicollis
ENSPTRG00000030609	CRNKL1	100	95.779	ENSFDAG00000000604	CRNKL1	100	95.779	Fukomys_damarensis
ENSPTRG00000030609	CRNKL1	98	86.033	ENSFHEG00000013163	crnkl1	88	86.033	Fundulus_heteroclitus
ENSPTRG00000030609	CRNKL1	97	85.629	ENSGMOG00000007609	crnkl1	94	84.311	Gadus_morhua
ENSPTRG00000030609	CRNKL1	99	93.577	ENSGALG00000008429	CRNKL1	99	93.577	Gallus_gallus
ENSPTRG00000030609	CRNKL1	97	86.336	ENSGAFG00000014249	crnkl1	90	84.672	Gambusia_affinis
ENSPTRG00000030609	CRNKL1	99	84.425	ENSGACG00000011852	crnkl1	92	84.425	Gasterosteus_aculeatus
ENSPTRG00000030609	CRNKL1	95	91.768	ENSGAGG00000021233	CRNKL1	100	91.844	Gopherus_agassizii
ENSPTRG00000030609	CRNKL1	100	99.854	ENSGGOG00000014176	CRNKL1	100	99.854	Gorilla_gorilla
ENSPTRG00000030609	CRNKL1	99	86.706	ENSHBUG00000005246	crnkl1	90	86.706	Haplochromis_burtoni
ENSPTRG00000030609	CRNKL1	100	95.924	ENSHGLG00000010856	CRNKL1	100	95.924	Heterocephalus_glaber_female
ENSPTRG00000030609	CRNKL1	100	95.924	ENSHGLG00100011521	CRNKL1	100	95.924	Heterocephalus_glaber_male
ENSPTRG00000030609	CRNKL1	97	84.258	ENSHCOG00000006420	crnkl1	98	82.845	Hippocampus_comes
ENSPTRG00000030609	CRNKL1	97	75.338	ENSIPUG00000006836	-	98	74.777	Ictalurus_punctatus
ENSPTRG00000030609	CRNKL1	94	86.595	ENSIPUG00000006751	crnkl1	93	84.925	Ictalurus_punctatus
ENSPTRG00000030609	CRNKL1	93	68.289	ENSIPUG00000000315	-	100	69.497	Ictalurus_punctatus
ENSPTRG00000030609	CRNKL1	100	96.652	ENSSTOG00000014747	CRNKL1	100	96.652	Ictidomys_tridecemlineatus
ENSPTRG00000030609	CRNKL1	100	94.310	ENSJJAG00000016926	Crnkl1	100	94.310	Jaculus_jaculus
ENSPTRG00000030609	CRNKL1	99	86.431	ENSKMAG00000003620	crnkl1	86	86.431	Kryptolebias_marmoratus
ENSPTRG00000030609	CRNKL1	97	75.957	ENSLBEG00000003543	crnkl1	91	75.038	Labrus_bergylta
ENSPTRG00000030609	CRNKL1	99	87.555	ENSLACG00000001129	CRNKL1	99	87.555	Latimeria_chalumnae
ENSPTRG00000030609	CRNKL1	97	88.705	ENSLOCG00000016889	crnkl1	94	87.740	Lepisosteus_oculatus
ENSPTRG00000030609	CRNKL1	100	96.657	ENSLAFG00000004512	CRNKL1	100	96.657	Loxodonta_africana
ENSPTRG00000030609	CRNKL1	100	99.563	ENSMFAG00000039893	CRNKL1	100	99.563	Macaca_fascicularis
ENSPTRG00000030609	CRNKL1	100	99.563	ENSMMUG00000007709	CRNKL1	100	99.563	Macaca_mulatta
ENSPTRG00000030609	CRNKL1	100	99.563	ENSMNEG00000037490	CRNKL1	100	99.563	Macaca_nemestrina
ENSPTRG00000030609	CRNKL1	100	99.563	ENSMLEG00000034885	CRNKL1	100	99.563	Mandrillus_leucophaeus
ENSPTRG00000030609	CRNKL1	98	86.756	ENSMAMG00000008757	crnkl1	89	86.756	Mastacembelus_armatus
ENSPTRG00000030609	CRNKL1	99	86.854	ENSMZEG00005022345	crnkl1	90	86.854	Maylandia_zebra
ENSPTRG00000030609	CRNKL1	99	92.857	ENSMGAG00000003452	CRNKL1	94	92.857	Meleagris_gallopavo
ENSPTRG00000030609	CRNKL1	100	96.215	ENSMAUG00000020764	Crnkl1	99	96.215	Mesocricetus_auratus
ENSPTRG00000030609	CRNKL1	100	98.253	ENSMICG00000006048	CRNKL1	100	98.253	Microcebus_murinus
ENSPTRG00000030609	CRNKL1	100	88.269	ENSMOCG00000000681	-	99	88.269	Microtus_ochrogaster
ENSPTRG00000030609	CRNKL1	97	69.670	ENSMOCG00000004179	-	96	69.881	Microtus_ochrogaster
ENSPTRG00000030609	CRNKL1	92	85.261	ENSMMOG00000017601	crnkl1	97	85.261	Mola_mola
ENSPTRG00000030609	CRNKL1	100	86.317	ENSMODG00000010857	-	99	86.317	Monodelphis_domestica
ENSPTRG00000030609	CRNKL1	100	91.523	ENSMODG00000005961	-	99	91.523	Monodelphis_domestica
ENSPTRG00000030609	CRNKL1	98	62.808	ENSMALG00000011211	crnkl1	88	65.574	Monopterus_albus
ENSPTRG00000030609	CRNKL1	100	96.215	MGP_CAROLIEiJ_G0024394	Crnkl1	99	96.215	Mus_caroli
ENSPTRG00000030609	CRNKL1	100	96.215	ENSMUSG00000001767	Crnkl1	99	96.215	Mus_musculus
ENSPTRG00000030609	CRNKL1	100	94.469	MGP_PahariEiJ_G0025838	Crnkl1	99	94.469	Mus_pahari
ENSPTRG00000030609	CRNKL1	100	96.361	MGP_SPRETEiJ_G0025312	Crnkl1	99	96.361	Mus_spretus
ENSPTRG00000030609	CRNKL1	100	97.089	ENSMPUG00000001226	CRNKL1	100	97.089	Mustela_putorius_furo
ENSPTRG00000030609	CRNKL1	100	96.366	ENSMLUG00000016513	CRNKL1	89	96.366	Myotis_lucifugus
ENSPTRG00000030609	CRNKL1	100	94.143	ENSNGAG00000023097	Crnkl1	100	94.143	Nannospalax_galili
ENSPTRG00000030609	CRNKL1	99	87.001	ENSNBRG00000007867	crnkl1	89	87.001	Neolamprologus_brichardi
ENSPTRG00000030609	CRNKL1	100	96.215	ENSNLEG00000009862	CRNKL1	100	96.215	Nomascus_leucogenys
ENSPTRG00000030609	CRNKL1	98	94.478	ENSMEUG00000012167	-	100	94.478	Notamacropus_eugenii
ENSPTRG00000030609	CRNKL1	100	85.174	ENSMEUG00000002361	-	99	85.174	Notamacropus_eugenii
ENSPTRG00000030609	CRNKL1	75	66.795	ENSOPRG00000009242	-	61	66.795	Ochotona_princeps
ENSPTRG00000030609	CRNKL1	100	95.779	ENSODEG00000012175	CRNKL1	100	95.779	Octodon_degus
ENSPTRG00000030609	CRNKL1	99	86.550	ENSONIG00000018728	crnkl1	89	87.297	Oreochromis_niloticus
ENSPTRG00000030609	CRNKL1	99	96.356	ENSOCUG00000015484	CRNKL1	83	96.356	Oryctolagus_cuniculus
ENSPTRG00000030609	CRNKL1	97	85.135	ENSORLG00000017240	crnkl1	94	82.432	Oryzias_latipes
ENSPTRG00000030609	CRNKL1	97	85.285	ENSORLG00020001742	crnkl1	89	85.285	Oryzias_latipes_hni
ENSPTRG00000030609	CRNKL1	97	85.285	ENSORLG00015019564	crnkl1	89	85.285	Oryzias_latipes_hsok
ENSPTRG00000030609	CRNKL1	99	84.234	ENSOMEG00000019895	crnkl1	91	84.234	Oryzias_melastigma
ENSPTRG00000030609	CRNKL1	100	98.108	ENSOGAG00000011544	CRNKL1	100	98.108	Otolemur_garnettii
ENSPTRG00000030609	CRNKL1	99	96.471	ENSOARG00000002150	CRNKL1	89	96.507	Ovis_aries
ENSPTRG00000030609	CRNKL1	100	98.836	ENSPPAG00000027847	CRNKL1	83	98.836	Pan_paniscus
ENSPTRG00000030609	CRNKL1	100	96.943	ENSPPRG00000001955	CRNKL1	100	96.943	Panthera_pardus
ENSPTRG00000030609	CRNKL1	100	96.943	ENSPTIG00000007393	CRNKL1	100	96.943	Panthera_tigris_altaica
ENSPTRG00000030609	CRNKL1	100	99.563	ENSPANG00000017420	CRNKL1	100	99.563	Papio_anubis
ENSPTRG00000030609	CRNKL1	96	81.805	ENSPKIG00000017093	crnkl1	88	81.509	Paramormyrops_kingsleyae
ENSPTRG00000030609	CRNKL1	99	91.801	ENSPSIG00000012705	CRNKL1	99	91.801	Pelodiscus_sinensis
ENSPTRG00000030609	CRNKL1	99	78.971	ENSPMGG00000006263	crnkl1	96	78.971	Periophthalmus_magnuspinnatus
ENSPTRG00000030609	CRNKL1	100	96.798	ENSPEMG00000000073	-	99	96.798	Peromyscus_maniculatus_bairdii
ENSPTRG00000030609	CRNKL1	99	81.686	ENSPMAG00000002250	crnkl1	99	81.686	Petromyzon_marinus
ENSPTRG00000030609	CRNKL1	100	93.595	ENSPCIG00000025825	CRNKL1	96	93.595	Phascolarctos_cinereus
ENSPTRG00000030609	CRNKL1	97	86.186	ENSPFOG00000005102	crnkl1	93	84.448	Poecilia_formosa
ENSPTRG00000030609	CRNKL1	97	86.186	ENSPLAG00000007288	crnkl1	90	84.325	Poecilia_latipinna
ENSPTRG00000030609	CRNKL1	97	86.336	ENSPMEG00000008865	crnkl1	93	84.593	Poecilia_mexicana
ENSPTRG00000030609	CRNKL1	97	85.886	ENSPREG00000012615	crnkl1	92	84.211	Poecilia_reticulata
ENSPTRG00000030609	CRNKL1	100	99.563	ENSPPYG00000010747	CRNKL1	81	99.563	Pongo_abelii
ENSPTRG00000030609	CRNKL1	99	91.029	ENSPCAG00000003296	CRNKL1	85	91.121	Procavia_capensis
ENSPTRG00000030609	CRNKL1	100	97.089	ENSPCOG00000017608	CRNKL1	83	97.089	Propithecus_coquereli
ENSPTRG00000030609	CRNKL1	100	97.234	ENSPVAG00000006207	CRNKL1	83	97.234	Pteropus_vampyrus
ENSPTRG00000030609	CRNKL1	99	86.706	ENSPNYG00000001977	crnkl1	90	86.706	Pundamilia_nyererei
ENSPTRG00000030609	CRNKL1	98	87.910	ENSPNAG00000001507	crnkl1	98	83.115	Pygocentrus_nattereri
ENSPTRG00000030609	CRNKL1	100	95.779	ENSRNOG00000040045	Crnkl1	99	95.779	Rattus_norvegicus
ENSPTRG00000030609	CRNKL1	100	96.215	ENSRNOG00000010587	Crnkl1	99	96.215	Rattus_norvegicus
ENSPTRG00000030609	CRNKL1	100	99.418	ENSRBIG00000031770	CRNKL1	100	99.418	Rhinopithecus_bieti
ENSPTRG00000030609	CRNKL1	100	99.272	ENSRROG00000040450	CRNKL1	100	99.272	Rhinopithecus_roxellana
ENSPTRG00000030609	CRNKL1	94	37.681	YLR117C	CLF1	99	37.771	Saccharomyces_cerevisiae
ENSPTRG00000030609	CRNKL1	100	98.981	ENSSBOG00000029672	CRNKL1	100	98.981	Saimiri_boliviensis_boliviensis
ENSPTRG00000030609	CRNKL1	96	74.962	ENSSHAG00000011199	CRNKL1	99	74.962	Sarcophilus_harrisii
ENSPTRG00000030609	CRNKL1	96	87.009	ENSSFOG00015000946	crnkl1	89	85.234	Scleropages_formosus
ENSPTRG00000030609	CRNKL1	99	84.548	ENSSMAG00000007933	crnkl1	89	84.548	Scophthalmus_maximus
ENSPTRG00000030609	CRNKL1	99	79.009	ENSSDUG00000012625	crnkl1	87	79.794	Seriola_dumerili
ENSPTRG00000030609	CRNKL1	99	85.693	ENSSLDG00000021413	crnkl1	88	86.558	Seriola_lalandi_dorsalis
ENSPTRG00000030609	CRNKL1	100	95.924	ENSSARG00000006443	CRNKL1	82	95.924	Sorex_araneus
ENSPTRG00000030609	CRNKL1	99	92.240	ENSSPUG00000005254	CRNKL1	99	92.240	Sphenodon_punctatus
ENSPTRG00000030609	CRNKL1	99	85.839	ENSSPAG00000016150	crnkl1	89	85.839	Stegastes_partitus
ENSPTRG00000030609	CRNKL1	100	96.652	ENSSSCG00000038587	CRNKL1	99	96.652	Sus_scrofa
ENSPTRG00000030609	CRNKL1	99	91.691	ENSTGUG00000007645	CRNKL1	98	91.691	Taeniopygia_guttata
ENSPTRG00000030609	CRNKL1	98	80.149	ENSTRUG00000015417	crnkl1	90	79.529	Takifugu_rubripes
ENSPTRG00000030609	CRNKL1	97	84.708	ENSTNIG00000010710	crnkl1	99	83.236	Tetraodon_nigroviridis
ENSPTRG00000030609	CRNKL1	92	96.677	ENSTBEG00000001304	CRNKL1	82	96.677	Tupaia_belangeri
ENSPTRG00000030609	CRNKL1	91	92.960	ENSTTRG00000000484	CRNKL1	81	93.038	Tursiops_truncatus
ENSPTRG00000030609	CRNKL1	100	96.943	ENSUAMG00000018586	CRNKL1	100	96.943	Ursus_americanus
ENSPTRG00000030609	CRNKL1	100	96.943	ENSUMAG00000024957	CRNKL1	100	96.943	Ursus_maritimus
ENSPTRG00000030609	CRNKL1	100	96.652	ENSVVUG00000012559	CRNKL1	82	96.652	Vulpes_vulpes
ENSPTRG00000030609	CRNKL1	99	89.956	ENSXETG00000009698	crnkl1	99	89.956	Xenopus_tropicalis
ENSPTRG00000030609	CRNKL1	97	85.457	ENSXCOG00000000824	crnkl1	91	83.895	Xiphophorus_couchianus
ENSPTRG00000030609	CRNKL1	97	86.336	ENSXMAG00000006896	crnkl1	91	84.751	Xiphophorus_maculatus