EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPTRG00000030691 (Gene tree)
Gene ID: 467519
Gene Symbol: SLIRP
Alias: -
Full Name: SRA stem-loop interacting RNA binding protein
Gene Type: protein_coding
Species: Pan_troglodytes
Status: putative
Strand: Plus strand
Length: 53165 bases
Position: chr14:62290394-62343558
Accession: 12536
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTRP00000089819	RRM_1	PF00076.22	3.7e-13	1	1
ENSPTRP00000074088	RRM_1	PF00076.22	4.1e-13	1	1
ENSPTRP00000052554	RRM_1	PF00076.22	6.1e-13	1	1
ENSPTRP00000086876	RRM_1	PF00076.22	8.9e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTRT00000093843	-	279	-	ENSPTRP00000074088	93 (aa)	-	A0A2I3SAK5
ENSPTRT00000059395	-	420	XM_003952546	ENSPTRP00000052554	106 (aa)	XP_003952595	K7BR91
ENSPTRT00000081605	-	375	-	ENSPTRP00000086876	124 (aa)	-	A0A2I3TDC9
ENSPTRT00000103728	-	297	-	ENSPTRP00000089819	98 (aa)	-	A0A2I3TKR1

Gene Model

Click here to download ENSPTRG00000030691's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000030691's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPTRG00000030691	SLIRP	87	30.769	ENSPTRG00000016217	HNRNPDL	50	30.233
ENSPTRG00000030691	SLIRP	74	36.000	ENSPTRG00000009437	MSI2	62	32.895
ENSPTRG00000030691	SLIRP	73	30.882	ENSPTRG00000013661	RBM38	59	30.986

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTRG00000030691	SLIRP	100	100.000	ENSG00000119705	SLIRP	100	100.000	Homo_sapiens
ENSPTRG00000030691	SLIRP	72	58.209	ENSAPOG00000001298	slirp	78	55.128	Acanthochromis_polyacanthus
ENSPTRG00000030691	SLIRP	96	80.899	ENSAMEG00000003975	SLIRP	85	80.519	Ailuropoda_melanoleuca
ENSPTRG00000030691	SLIRP	78	55.952	ENSACIG00000023083	slirp	83	55.952	Amphilophus_citrinellus
ENSPTRG00000030691	SLIRP	80	55.814	ENSAOCG00000006342	slirp	87	55.814	Amphiprion_ocellaris
ENSPTRG00000030691	SLIRP	80	55.814	ENSAPEG00000015917	slirp	87	55.814	Amphiprion_percula
ENSPTRG00000030691	SLIRP	80	55.814	ENSAPEG00000015719	-	88	55.814	Amphiprion_percula
ENSPTRG00000030691	SLIRP	72	59.701	ENSATEG00000013525	slirp	77	55.844	Anabas_testudineus
ENSPTRG00000030691	SLIRP	79	55.294	ENSAMXG00000018693	slirp	85	55.294	Astyanax_mexicanus
ENSPTRG00000030691	SLIRP	100	82.653	ENSCJAG00000016946	SLIRP	89	82.727	Callithrix_jacchus
ENSPTRG00000030691	SLIRP	95	78.409	ENSCAFG00020015876	-	85	72.340	Canis_lupus_dingo
ENSPTRG00000030691	SLIRP	100	81.452	ENSCCAG00000030130	SLIRP	89	82.727	Cebus_capucinus
ENSPTRG00000030691	SLIRP	100	86.022	ENSCATG00000036327	SLIRP	85	86.076	Cercocebus_atys
ENSPTRG00000030691	SLIRP	100	82.075	ENSCSAG00000011736	SLIRP	84	80.435	Chlorocebus_sabaeus
ENSPTRG00000030691	SLIRP	72	65.672	ENSCPBG00000026327	SLIRP	73	62.500	Chrysemys_picta_bellii
ENSPTRG00000030691	SLIRP	85	84.810	ENSCANG00000032892	SLIRP	86	80.952	Colobus_angolensis_palliatus
ENSPTRG00000030691	SLIRP	95	73.864	ENSCGRG00001024068	Slirp	84	66.667	Cricetulus_griseus_chok1gshd
ENSPTRG00000030691	SLIRP	95	73.864	ENSCGRG00000017440	Slirp	84	66.667	Cricetulus_griseus_crigri
ENSPTRG00000030691	SLIRP	100	48.980	ENSCSEG00000015766	slirp	77	54.545	Cynoglossus_semilaevis
ENSPTRG00000030691	SLIRP	73	64.706	ENSCVAG00000012504	slirp	68	65.217	Cyprinodon_variegatus
ENSPTRG00000030691	SLIRP	73	60.294	ENSDARG00000097753	slirp	72	59.459	Danio_rerio
ENSPTRG00000030691	SLIRP	81	68.182	ENSDNOG00000007721	SLIRP	81	67.416	Dasypus_novemcinctus
ENSPTRG00000030691	SLIRP	95	73.864	ENSDORG00000012379	Slirp	86	67.368	Dipodomys_ordii
ENSPTRG00000030691	SLIRP	90	66.316	ENSETEG00000010345	SLIRP	85	66.304	Echinops_telfairi
ENSPTRG00000030691	SLIRP	95	80.682	ENSEASG00005020193	SLIRP	86	73.684	Equus_asinus_asinus
ENSPTRG00000030691	SLIRP	96	62.500	ENSEEUG00000007257	SLIRP	88	66.292	Erinaceus_europaeus
ENSPTRG00000030691	SLIRP	70	58.462	ENSELUG00000016800	slirp	73	55.405	Esox_lucius
ENSPTRG00000030691	SLIRP	97	82.222	ENSFCAG00000036326	SLIRP	83	80.488	Felis_catus
ENSPTRG00000030691	SLIRP	72	55.224	ENSFALG00000012583	SLIRP	81	47.674	Ficedula_albicollis
ENSPTRG00000030691	SLIRP	96	67.021	ENSFDAG00000008347	SLIRP	79	68.539	Fukomys_damarensis
ENSPTRG00000030691	SLIRP	71	57.895	ENSFHEG00000004709	slirp	83	57.895	Fundulus_heteroclitus
ENSPTRG00000030691	SLIRP	91	47.525	ENSGMOG00000016948	slirp	84	51.136	Gadus_morhua
ENSPTRG00000030691	SLIRP	85	53.165	ENSGALG00000031238	SLIRP	73	56.522	Gallus_gallus
ENSPTRG00000030691	SLIRP	75	64.286	ENSGAFG00000010998	slirp	84	59.524	Gambusia_affinis
ENSPTRG00000030691	SLIRP	73	57.353	ENSGACG00000020137	slirp	84	55.556	Gasterosteus_aculeatus
ENSPTRG00000030691	SLIRP	72	71.642	ENSGAGG00000009953	SLIRP	60	61.364	Gopherus_agassizii
ENSPTRG00000030691	SLIRP	100	100.000	ENSGGOG00000011059	-	100	100.000	Gorilla_gorilla
ENSPTRG00000030691	SLIRP	100	58.716	ENSHGLG00000018491	SLIRP	81	61.111	Heterocephalus_glaber_female
ENSPTRG00000030691	SLIRP	100	58.716	ENSHGLG00100014153	SLIRP	81	61.111	Heterocephalus_glaber_male
ENSPTRG00000030691	SLIRP	73	63.235	ENSHCOG00000006795	slirp	78	61.039	Hippocampus_comes
ENSPTRG00000030691	SLIRP	79	51.765	ENSIPUG00000010214	SLIRP	85	51.765	Ictalurus_punctatus
ENSPTRG00000030691	SLIRP	100	70.642	ENSSTOG00000034316	SLIRP	86	68.421	Ictidomys_tridecemlineatus
ENSPTRG00000030691	SLIRP	80	45.556	ENSKMAG00000002038	slirp	87	45.556	Kryptolebias_marmoratus
ENSPTRG00000030691	SLIRP	79	51.765	ENSLBEG00000007564	slirp	85	51.765	Labrus_bergylta
ENSPTRG00000030691	SLIRP	75	60.000	ENSLACG00000013434	SLIRP	83	54.651	Latimeria_chalumnae
ENSPTRG00000030691	SLIRP	100	87.097	ENSMFAG00000042960	SLIRP	85	86.076	Macaca_fascicularis
ENSPTRG00000030691	SLIRP	100	87.097	ENSMMUG00000029256	SLIRP	85	86.076	Macaca_mulatta
ENSPTRG00000030691	SLIRP	100	87.097	ENSMNEG00000028921	SLIRP	85	86.076	Macaca_nemestrina
ENSPTRG00000030691	SLIRP	100	86.022	ENSMLEG00000043644	SLIRP	86	82.143	Mandrillus_leucophaeus
ENSPTRG00000030691	SLIRP	79	57.647	ENSMZEG00005004617	slirp	86	57.647	Maylandia_zebra
ENSPTRG00000030691	SLIRP	95	73.864	ENSMAUG00000003857	Slirp	83	69.565	Mesocricetus_auratus
ENSPTRG00000030691	SLIRP	96	77.528	ENSMICG00000012080	SLIRP	88	73.636	Microcebus_murinus
ENSPTRG00000030691	SLIRP	95	72.727	ENSMOCG00000016019	Slirp	83	69.892	Microtus_ochrogaster
ENSPTRG00000030691	SLIRP	80	52.326	ENSMMOG00000018268	slirp	85	52.941	Mola_mola
ENSPTRG00000030691	SLIRP	74	65.217	ENSMODG00000005207	-	100	64.789	Monodelphis_domestica
ENSPTRG00000030691	SLIRP	73	58.824	ENSMALG00000012581	slirp	77	57.333	Monopterus_albus
ENSPTRG00000030691	SLIRP	95	76.136	MGP_CAROLIEiJ_G0017995	Slirp	87	70.213	Mus_caroli
ENSPTRG00000030691	SLIRP	95	77.273	ENSMUSG00000021040	Slirp	78	77.922	Mus_musculus
ENSPTRG00000030691	SLIRP	95	77.273	MGP_SPRETEiJ_G0018840	Slirp	85	70.526	Mus_spretus
ENSPTRG00000030691	SLIRP	85	65.591	ENSMLUG00000024998	-	86	65.263	Myotis_lucifugus
ENSPTRG00000030691	SLIRP	90	71.591	ENSMLUG00000029544	-	85	65.263	Myotis_lucifugus
ENSPTRG00000030691	SLIRP	99	67.593	ENSNGAG00000016363	Slirp	90	70.213	Nannospalax_galili
ENSPTRG00000030691	SLIRP	92	83.673	ENSNLEG00000027238	-	90	83.333	Nomascus_leucogenys
ENSPTRG00000030691	SLIRP	100	91.935	ENSNLEG00000032459	-	89	92.727	Nomascus_leucogenys
ENSPTRG00000030691	SLIRP	96	77.528	ENSODEG00000012580	SLIRP	83	78.947	Octodon_degus
ENSPTRG00000030691	SLIRP	79	56.471	ENSONIG00000011692	slirp	86	56.471	Oreochromis_niloticus
ENSPTRG00000030691	SLIRP	95	62.500	ENSOANG00000022366	SLIRP	83	60.215	Ornithorhynchus_anatinus
ENSPTRG00000030691	SLIRP	76	56.098	ENSORLG00000010761	slirp	64	55.422	Oryzias_latipes
ENSPTRG00000030691	SLIRP	76	57.317	ENSORLG00020022188	slirp	82	57.317	Oryzias_latipes_hni
ENSPTRG00000030691	SLIRP	99	48.113	ENSORLG00015020171	slirp	84	54.118	Oryzias_latipes_hsok
ENSPTRG00000030691	SLIRP	77	56.627	ENSOMEG00000019321	slirp	83	56.627	Oryzias_melastigma
ENSPTRG00000030691	SLIRP	100	100.000	ENSPPAG00000040710	-	100	100.000	Pan_paniscus
ENSPTRG00000030691	SLIRP	98	81.250	ENSPPRG00000014350	SLIRP	83	81.707	Panthera_pardus
ENSPTRG00000030691	SLIRP	98	81.250	ENSPTIG00000014196	SLIRP	83	81.707	Panthera_tigris_altaica
ENSPTRG00000030691	SLIRP	100	87.097	ENSPANG00000026323	SLIRP	85	87.342	Papio_anubis
ENSPTRG00000030691	SLIRP	62	58.621	ENSPKIG00000008831	slirp	69	54.286	Paramormyrops_kingsleyae
ENSPTRG00000030691	SLIRP	73	69.118	ENSPMGG00000010541	slirp	87	63.158	Periophthalmus_magnuspinnatus
ENSPTRG00000030691	SLIRP	74	76.812	ENSPEMG00000013234	Slirp	75	71.053	Peromyscus_maniculatus_bairdii
ENSPTRG00000030691	SLIRP	65	53.333	ENSPMAG00000009355	slirp	76	50.000	Petromyzon_marinus
ENSPTRG00000030691	SLIRP	95	59.091	ENSPCIG00000026842	-	74	69.565	Phascolarctos_cinereus
ENSPTRG00000030691	SLIRP	73	61.765	ENSPFOG00000006758	slirp	76	60.526	Poecilia_formosa
ENSPTRG00000030691	SLIRP	80	55.814	ENSPLAG00000011140	slirp	85	56.471	Poecilia_latipinna
ENSPTRG00000030691	SLIRP	73	61.765	ENSPMEG00000019535	slirp	76	60.526	Poecilia_mexicana
ENSPTRG00000030691	SLIRP	73	61.765	ENSPREG00000011673	slirp	76	60.526	Poecilia_reticulata
ENSPTRG00000030691	SLIRP	100	89.623	ENSPPYG00000006030	SLIRP	84	89.130	Pongo_abelii
ENSPTRG00000030691	SLIRP	96	77.528	ENSPCOG00000015159	SLIRP	88	74.545	Propithecus_coquereli
ENSPTRG00000030691	SLIRP	73	64.706	ENSPNAG00000008633	slirp	88	56.322	Pygocentrus_nattereri
ENSPTRG00000030691	SLIRP	100	87.097	ENSRBIG00000032222	-	85	86.076	Rhinopithecus_bieti
ENSPTRG00000030691	SLIRP	100	81.633	ENSRBIG00000032998	-	78	79.762	Rhinopithecus_bieti
ENSPTRG00000030691	SLIRP	100	79.245	ENSRBIG00000035817	-	86	77.174	Rhinopithecus_bieti
ENSPTRG00000030691	SLIRP	92	84.884	ENSRBIG00000031396	-	72	84.722	Rhinopithecus_bieti
ENSPTRG00000030691	SLIRP	92	83.721	ENSRROG00000035604	-	72	83.333	Rhinopithecus_roxellana
ENSPTRG00000030691	SLIRP	100	86.022	ENSRROG00000036656	-	85	86.076	Rhinopithecus_roxellana
ENSPTRG00000030691	SLIRP	100	82.292	ENSRROG00000017133	-	85	81.707	Rhinopithecus_roxellana
ENSPTRG00000030691	SLIRP	96	85.393	ENSRROG00000041312	-	77	84.615	Rhinopithecus_roxellana
ENSPTRG00000030691	SLIRP	100	82.258	ENSSBOG00000020014	SLIRP	88	83.636	Saimiri_boliviensis_boliviensis
ENSPTRG00000030691	SLIRP	81	60.759	ENSSFOG00015011165	slirp	80	58.228	Scleropages_formosus
ENSPTRG00000030691	SLIRP	85	41.772	ENSSMAG00000012930	slirp	73	47.297	Scophthalmus_maximus
ENSPTRG00000030691	SLIRP	73	61.765	ENSSDUG00000021883	slirp	55	54.762	Seriola_dumerili
ENSPTRG00000030691	SLIRP	73	61.765	ENSSLDG00000023136	slirp	75	54.762	Seriola_lalandi_dorsalis
ENSPTRG00000030691	SLIRP	86	61.728	ENSSPUG00000009346	SLIRP	72	64.789	Sphenodon_punctatus
ENSPTRG00000030691	SLIRP	74	55.128	ENSSPAG00000013477	slirp	78	55.128	Stegastes_partitus
ENSPTRG00000030691	SLIRP	95	75.000	ENSSSCG00000028167	SLIRP	86	68.421	Sus_scrofa
ENSPTRG00000030691	SLIRP	72	55.224	ENSTGUG00000012337	SLIRP	81	48.837	Taeniopygia_guttata
ENSPTRG00000030691	SLIRP	95	48.315	ENSTRUG00000020127	slirp	74	54.667	Takifugu_rubripes
ENSPTRG00000030691	SLIRP	95	79.545	ENSUAMG00000022445	SLIRP	86	72.632	Ursus_americanus
ENSPTRG00000030691	SLIRP	95	79.545	ENSUMAG00000007166	SLIRP	86	73.684	Ursus_maritimus
ENSPTRG00000030691	SLIRP	100	70.755	ENSVPAG00000001781	SLIRP	85	70.652	Vicugna_pacos
ENSPTRG00000030691	SLIRP	83	77.922	ENSVVUG00000004436	SLIRP	85	73.404	Vulpes_vulpes
ENSPTRG00000030691	SLIRP	73	63.235	ENSXETG00000030343	SLIRP	80	63.380	Xenopus_tropicalis
ENSPTRG00000030691	SLIRP	75	61.429	ENSXCOG00000009422	slirp	85	56.471	Xiphophorus_couchianus
ENSPTRG00000030691	SLIRP	75	62.857	ENSXMAG00000015655	slirp	85	57.647	Xiphophorus_maculatus