EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPTRG00000031120 (Gene tree)
Gene ID: 100612015
Gene Symbol: PABPN1L
Alias: -
Full Name: poly(A) binding protein nuclear 1 like%2C cytoplasmic
Gene Type: protein_coding
Species: Pan_troglodytes
Status: putative
Strand: Minus strand
Length: 3756 bases
Position: chr16:80193616-80197371
Accession: 13760
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTRP00000053348	RRM_1	PF00076.22	8e-15	1	1
ENSPTRP00000085510	RRM_1	PF00076.22	6.9e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTRT00000060060	-	1596	XM_016930392	ENSPTRP00000053348	278 (aa)	XP_016785881	H2R9Z5
ENSPTRT00000088933	-	1534	XM_016930391	ENSPTRP00000085510	255 (aa)	XP_016785880	A0A2I3T8C6

Gene Model

Click here to download ENSPTRG00000031120's gene model file

Pathways

Pathway ID	Pathway Name	Source
ptr03015	mRNA surveillance pathway	KEGG
ptr05164	Influenza A	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000031120's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPTRG00000031120	PABPN1L	72	44.928	ENSPTRG00000047273	-	73	45.411
ENSPTRG00000031120	PABPN1L	50	59.589	ENSPTRG00000006167	BCL2L2	71	49.754

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTRG00000031120	PABPN1L	100	98.431	ENSG00000205022	PABPN1L	100	98.431	Homo_sapiens
ENSPTRG00000031120	PABPN1L	51	58.741	ENSACIG00000021400	PABPN1L	85	55.901	Amphilophus_citrinellus
ENSPTRG00000031120	PABPN1L	70	58.763	ENSACAG00000013250	PABPN1L	99	58.763	Anolis_carolinensis
ENSPTRG00000031120	PABPN1L	100	81.655	ENSANAG00000038178	PABPN1L	100	81.295	Aotus_nancymaae
ENSPTRG00000031120	PABPN1L	72	50.000	ENSACLG00000025147	PABPN1L	71	51.244	Astatotilapia_calliptera
ENSPTRG00000031120	PABPN1L	58	56.875	ENSAMXG00000010873	PABPN1L	71	53.968	Astyanax_mexicanus
ENSPTRG00000031120	PABPN1L	51	78.014	ENSBTAG00000006727	-	86	78.014	Bos_taurus
ENSPTRG00000031120	PABPN1L	100	65.603	ENSBTAG00000023752	-	100	65.603	Bos_taurus
ENSPTRG00000031120	PABPN1L	100	81.295	ENSCJAG00000045284	PABPN1L	100	82.374	Callithrix_jacchus
ENSPTRG00000031120	PABPN1L	99	63.509	ENSCHIG00000013987	PABPN1L	100	60.269	Capra_hircus
ENSPTRG00000031120	PABPN1L	95	65.809	ENSCAPG00000007240	PABPN1L	100	65.934	Cavia_aperea
ENSPTRG00000031120	PABPN1L	100	67.626	ENSCPOG00000025951	PABPN1L	100	67.742	Cavia_porcellus
ENSPTRG00000031120	PABPN1L	100	82.014	ENSCCAG00000027631	PABPN1L	100	82.374	Cebus_capucinus
ENSPTRG00000031120	PABPN1L	100	91.727	ENSCATG00000031060	PABPN1L	100	90.647	Cercocebus_atys
ENSPTRG00000031120	PABPN1L	100	70.968	ENSCLAG00000000704	PABPN1L	100	69.176	Chinchilla_lanigera
ENSPTRG00000031120	PABPN1L	100	85.374	ENSCSAG00000002881	PABPN1L	100	85.374	Chlorocebus_sabaeus
ENSPTRG00000031120	PABPN1L	70	57.143	ENSCPBG00000023441	PABPN1L	61	58.883	Chrysemys_picta_bellii
ENSPTRG00000031120	PABPN1L	100	88.489	ENSCANG00000039336	PABPN1L	100	89.209	Colobus_angolensis_palliatus
ENSPTRG00000031120	PABPN1L	100	73.477	ENSCGRG00001013211	Pabpn1l	100	73.118	Cricetulus_griseus_chok1gshd
ENSPTRG00000031120	PABPN1L	100	73.477	ENSCGRG00000015868	Pabpn1l	100	73.118	Cricetulus_griseus_crigri
ENSPTRG00000031120	PABPN1L	58	53.988	ENSCSEG00000001142	pabpn1l	72	52.308	Cynoglossus_semilaevis
ENSPTRG00000031120	PABPN1L	100	61.131	ENSDNOG00000034677	PABPN1L	100	60.424	Dasypus_novemcinctus
ENSPTRG00000031120	PABPN1L	100	71.277	ENSEASG00005000777	PABPN1L	100	70.213	Equus_asinus_asinus
ENSPTRG00000031120	PABPN1L	100	71.986	ENSECAG00000000378	PABPN1L	100	70.922	Equus_caballus
ENSPTRG00000031120	PABPN1L	100	59.140	ENSEEUG00000004747	PABPN1L	100	57.914	Erinaceus_europaeus
ENSPTRG00000031120	PABPN1L	64	54.237	ENSELUG00000018385	PABPN1L	63	56.805	Esox_lucius
ENSPTRG00000031120	PABPN1L	100	70.213	ENSFCAG00000010465	PABPN1L	100	69.751	Felis_catus
ENSPTRG00000031120	PABPN1L	72	54.726	ENSFALG00000003319	PABPN1L	80	54.229	Ficedula_albicollis
ENSPTRG00000031120	PABPN1L	100	69.176	ENSFDAG00000021067	PABPN1L	100	67.986	Fukomys_damarensis
ENSPTRG00000031120	PABPN1L	58	53.374	ENSFHEG00000018295	PABPN1L	71	51.485	Fundulus_heteroclitus
ENSPTRG00000031120	PABPN1L	54	55.333	ENSGMOG00000001475	PABPN1L	68	54.839	Gadus_morhua
ENSPTRG00000031120	PABPN1L	54	66.000	ENSGALG00000006242	PABPN1L	88	64.935	Gallus_gallus
ENSPTRG00000031120	PABPN1L	58	52.096	ENSGACG00000015428	PABPN1L	72	51.220	Gasterosteus_aculeatus
ENSPTRG00000031120	PABPN1L	65	58.889	ENSGAGG00000010613	PABPN1L	59	58.889	Gopherus_agassizii
ENSPTRG00000031120	PABPN1L	100	93.525	ENSGGOG00000012670	PABPN1L	100	92.806	Gorilla_gorilla
ENSPTRG00000031120	PABPN1L	72	49.000	ENSHBUG00000002388	PABPN1L	71	51.244	Haplochromis_burtoni
ENSPTRG00000031120	PABPN1L	96	68.045	ENSHGLG00000014207	PABPN1L	100	68.539	Heterocephalus_glaber_female
ENSPTRG00000031120	PABPN1L	96	68.045	ENSHGLG00100005230	PABPN1L	100	68.539	Heterocephalus_glaber_male
ENSPTRG00000031120	PABPN1L	62	51.445	ENSHCOG00000004151	PABPN1L	72	51.208	Hippocampus_comes
ENSPTRG00000031120	PABPN1L	58	54.938	ENSIPUG00000023583	PABPN1L	90	54.211	Ictalurus_punctatus
ENSPTRG00000031120	PABPN1L	100	67.742	ENSSTOG00000020814	PABPN1L	100	67.742	Ictidomys_tridecemlineatus
ENSPTRG00000031120	PABPN1L	100	68.571	ENSJJAG00000006433	Pabpn1l	100	67.384	Jaculus_jaculus
ENSPTRG00000031120	PABPN1L	58	53.374	ENSLBEG00000011647	PABPN1L	69	52.475	Labrus_bergylta
ENSPTRG00000031120	PABPN1L	70	65.816	ENSLAFG00000025902	-	78	65.816	Loxodonta_africana
ENSPTRG00000031120	PABPN1L	100	92.446	ENSMFAG00000002924	PABPN1L	100	91.367	Macaca_fascicularis
ENSPTRG00000031120	PABPN1L	100	91.727	ENSMMUG00000012438	PABPN1L	100	90.647	Macaca_mulatta
ENSPTRG00000031120	PABPN1L	100	92.446	ENSMNEG00000044808	PABPN1L	100	91.367	Macaca_nemestrina
ENSPTRG00000031120	PABPN1L	100	92.086	ENSMLEG00000032667	PABPN1L	100	91.007	Mandrillus_leucophaeus
ENSPTRG00000031120	PABPN1L	72	50.000	ENSMZEG00005002186	PABPN1L	71	51.244	Maylandia_zebra
ENSPTRG00000031120	PABPN1L	100	68.345	ENSMAUG00000014032	Pabpn1l	100	68.539	Mesocricetus_auratus
ENSPTRG00000031120	PABPN1L	100	77.419	ENSMICG00000028179	PABPN1L	100	76.344	Microcebus_murinus
ENSPTRG00000031120	PABPN1L	100	67.742	ENSMOCG00000007955	Pabpn1l	100	67.742	Microtus_ochrogaster
ENSPTRG00000031120	PABPN1L	100	53.546	ENSMODG00000003873	-	100	52.482	Monodelphis_domestica
ENSPTRG00000031120	PABPN1L	60	53.571	ENSMALG00000016926	PABPN1L	71	50.500	Monopterus_albus
ENSPTRG00000031120	PABPN1L	100	66.667	MGP_CAROLIEiJ_G0031670	Pabpn1l	100	66.308	Mus_caroli
ENSPTRG00000031120	PABPN1L	100	66.308	ENSMUSG00000069867	Pabpn1l	100	65.950	Mus_musculus
ENSPTRG00000031120	PABPN1L	100	67.025	MGP_PahariEiJ_G0023268	Pabpn1l	100	66.667	Mus_pahari
ENSPTRG00000031120	PABPN1L	100	65.950	MGP_SPRETEiJ_G0032788	Pabpn1l	100	65.591	Mus_spretus
ENSPTRG00000031120	PABPN1L	96	51.237	ENSMLUG00000003228	PABPN1L	95	50.883	Myotis_lucifugus
ENSPTRG00000031120	PABPN1L	100	71.685	ENSNGAG00000023992	Pabpn1l	100	70.251	Nannospalax_galili
ENSPTRG00000031120	PABPN1L	100	69.534	ENSOPRG00000005597	PABPN1L	100	67.857	Ochotona_princeps
ENSPTRG00000031120	PABPN1L	100	62.671	ENSODEG00000004649	PABPN1L	100	62.329	Octodon_degus
ENSPTRG00000031120	PABPN1L	100	51.971	ENSOANG00000013901	PABPN1L	100	51.613	Ornithorhynchus_anatinus
ENSPTRG00000031120	PABPN1L	72	51.244	ENSORLG00000026560	PABPN1L	71	51.244	Oryzias_latipes
ENSPTRG00000031120	PABPN1L	72	51.244	ENSORLG00020015068	PABPN1L	71	51.244	Oryzias_latipes_hni
ENSPTRG00000031120	PABPN1L	72	51.244	ENSORLG00015000397	PABPN1L	71	51.244	Oryzias_latipes_hsok
ENSPTRG00000031120	PABPN1L	75	50.952	ENSOMEG00000017896	PABPN1L	51	52.736	Oryzias_melastigma
ENSPTRG00000031120	PABPN1L	100	75.269	ENSOGAG00000000433	PABPN1L	100	74.910	Otolemur_garnettii
ENSPTRG00000031120	PABPN1L	100	64.379	ENSOARG00000013682	PABPN1L	100	64.379	Ovis_aries
ENSPTRG00000031120	PABPN1L	100	100.000	ENSPPAG00000028866	PABPN1L	100	100.000	Pan_paniscus
ENSPTRG00000031120	PABPN1L	100	70.922	ENSPPRG00000015106	PABPN1L	100	70.107	Panthera_pardus
ENSPTRG00000031120	PABPN1L	93	64.615	ENSPTIG00000015606	PABPN1L	100	63.707	Panthera_tigris_altaica
ENSPTRG00000031120	PABPN1L	100	91.727	ENSPANG00000026039	PABPN1L	100	90.647	Papio_anubis
ENSPTRG00000031120	PABPN1L	69	55.051	ENSPSIG00000003404	PABPN1L	100	56.566	Pelodiscus_sinensis
ENSPTRG00000031120	PABPN1L	100	70.251	ENSPEMG00000016624	Pabpn1l	100	69.534	Peromyscus_maniculatus_bairdii
ENSPTRG00000031120	PABPN1L	51	63.194	ENSPCIG00000007038	-	100	63.194	Phascolarctos_cinereus
ENSPTRG00000031120	PABPN1L	58	43.939	ENSPFOG00000007001	PABPN1L	89	43.103	Poecilia_formosa
ENSPTRG00000031120	PABPN1L	100	94.964	ENSPPYG00000007655	PABPN1L	100	94.964	Pongo_abelii
ENSPTRG00000031120	PABPN1L	100	73.022	ENSPCOG00000024077	PABPN1L	100	73.477	Propithecus_coquereli
ENSPTRG00000031120	PABPN1L	100	69.858	ENSPVAG00000002716	PABPN1L	100	69.858	Pteropus_vampyrus
ENSPTRG00000031120	PABPN1L	72	50.000	ENSPNYG00000004803	PABPN1L	71	51.244	Pundamilia_nyererei
ENSPTRG00000031120	PABPN1L	100	69.892	ENSRNOG00000029558	Pabpn1l	100	69.534	Rattus_norvegicus
ENSPTRG00000031120	PABPN1L	100	92.086	ENSRBIG00000030740	PABPN1L	100	91.007	Rhinopithecus_bieti
ENSPTRG00000031120	PABPN1L	99	91.697	ENSRROG00000035483	-	99	90.253	Rhinopithecus_roxellana
ENSPTRG00000031120	PABPN1L	100	91.367	ENSRROG00000032240	-	100	90.288	Rhinopithecus_roxellana
ENSPTRG00000031120	PABPN1L	100	82.374	ENSSBOG00000018410	PABPN1L	100	83.094	Saimiri_boliviensis_boliviensis
ENSPTRG00000031120	PABPN1L	100	52.685	ENSSHAG00000010001	-	100	52.349	Sarcophilus_harrisii
ENSPTRG00000031120	PABPN1L	59	55.215	ENSSMAG00000021348	PABPN1L	72	51.942	Scophthalmus_maximus
ENSPTRG00000031120	PABPN1L	58	53.704	ENSSDUG00000006986	PABPN1L	71	50.500	Seriola_dumerili
ENSPTRG00000031120	PABPN1L	58	54.321	ENSSLDG00000021845	PABPN1L	71	51.000	Seriola_lalandi_dorsalis
ENSPTRG00000031120	PABPN1L	94	49.237	ENSSARG00000005178	-	99	47.909	Sorex_araneus
ENSPTRG00000031120	PABPN1L	69	58.549	ENSSPUG00000007031	PABPN1L	84	58.763	Sphenodon_punctatus
ENSPTRG00000031120	PABPN1L	72	50.746	ENSSPAG00000017978	PABPN1L	71	51.707	Stegastes_partitus
ENSPTRG00000031120	PABPN1L	100	67.730	ENSSSCG00000036367	PABPN1L	100	68.440	Sus_scrofa
ENSPTRG00000031120	PABPN1L	58	54.167	ENSTRUG00000024725	PABPN1L	81	51.675	Takifugu_rubripes
ENSPTRG00000031120	PABPN1L	100	68.683	ENSTTRG00000004691	PABPN1L	100	69.504	Tursiops_truncatus
ENSPTRG00000031120	PABPN1L	59	54.706	ENSXETG00000011258	pabpn1l	96	52.315	Xenopus_tropicalis