EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPTRG00000031176 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Pan_troglodytes
Status: putative
Strand: Plus strand
Length: 962 bases
Position: chr13:37605692-37606653
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTRP00000060912	RRM_1	PF00076.22	7.5e-20	1	1
ENSPTRP00000060912	HnRNPA1	PF11627.8	1.2e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTRT00000010843	-	876	XM_009427014	ENSPTRP00000060912	291 (aa)	-	H2RHB3

Gene Model

Click here to download ENSPTRG00000031176's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000031176's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPTRG00000031176	-	53	31.765	ENSPTRG00000017601	HNRNPAB	61	31.638
ENSPTRG00000031176	-	100	86.562	ENSPTRG00000049417	HNRNPA1	100	86.562
ENSPTRG00000031176	-	57	35.000	ENSPTRG00000009437	MSI2	70	44.915
ENSPTRG00000031176	-	58	43.719	ENSPTRG00000048463	-	88	40.964
ENSPTRG00000031176	-	67	62.222	ENSPTRG00000018253	-	90	59.245
ENSPTRG00000031176	-	86	49.240	ENSPTRG00000048252	-	50	62.778
ENSPTRG00000031176	-	55	66.667	ENSPTRG00000052291	-	79	53.310
ENSPTRG00000031176	-	56	61.340	ENSPTRG00000052830	-	73	59.799
ENSPTRG00000031176	-	53	36.471	ENSPTRG00000016215	HNRNPD	55	35.673
ENSPTRG00000031176	-	59	55.556	ENSPTRG00000045033	-	83	47.410
ENSPTRG00000031176	-	51	59.459	ENSPTRG00000048376	-	82	45.660
ENSPTRG00000031176	-	87	59.783	ENSPTRG00000019002	HNRNPA2B1	94	52.500
ENSPTRG00000031176	-	53	48.352	ENSPTRG00000017273	HNRNPA0	58	48.619
ENSPTRG00000031176	-	100	82.188	ENSPTRG00000032634	-	100	82.188
ENSPTRG00000031176	-	55	74.011	ENSPTRG00000052173	-	60	81.579
ENSPTRG00000031176	-	55	30.435	ENSPTRG00000010199	DAZAP1	51	37.209
ENSPTRG00000031176	-	93	74.733	ENSPTRG00000044399	-	88	74.643
ENSPTRG00000031176	-	74	36.264	ENSPTRG00000005531	MSI1	51	44.531
ENSPTRG00000031176	-	57	47.959	ENSPTRG00000012676	HNRNPA3	89	56.548

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTRG00000031176	-	62	70.558	ENSAMEG00000015127	-	72	77.966	Ailuropoda_melanoleuca
ENSPTRG00000031176	-	93	46.479	ENSCAFG00000005762	-	98	49.138	Canis_familiaris
ENSPTRG00000031176	-	69	71.859	ENSCAFG00000002232	-	93	59.375	Canis_familiaris
ENSPTRG00000031176	-	64	49.074	ENSDNOG00000009228	-	97	78.082	Dasypus_novemcinctus
ENSPTRG00000031176	-	66	75.573	ENSMEUG00000008083	-	99	60.714	Notamacropus_eugenii